RNA–Protein interactions for RNA: ENST00000544989.1

HDAC4-216, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 342 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-216ENST00000544989 A0A087WXM4 84 aa9.35□□□□□ -0.91
HDAC4-216ENST00000544989 SAA2-SAA4A0A096LPE2 208 aa9.35□□□□□ -0.91
HDAC4-216ENST00000544989 SHISA3A0PJX4 238 aa9.35□□□□□ -0.91
HDAC4-216ENST00000544989 RAB27BO00194 218 aa9.35□□□□□ -0.91
HDAC4-216ENST00000544989 RBBP9O75884 186 aa9.35□□□□□ -0.91
HDAC4-216ENST00000544989 SAA2P0DJI9 122 aaPredicted RBP9.35□□□□□ -0.91
HDAC4-216ENST00000544989 OR5H8P0DN80 308 aa9.35□□□□□ -0.91
HDAC4-216ENST00000544989 PF4V1P10720 104 aa9.35□□□□□ -0.91
HDAC4-216ENST00000544989 SOX6P35712 828 aa9.35□□□□□ -0.91
HDAC4-216ENST00000544989 TALDO1P37837 337 aa9.35□□□□□ -0.91
HDAC4-216ENST00000544989 GPR12P47775 334 aa9.35□□□□□ -0.91
HDAC4-216ENST00000544989 MMDQ15546 238 aa9.35□□□□□ -0.91
HDAC4-216ENST00000544989 FAM53AQ6NSI3 398 aaPredicted RBP9.35□□□□□ -0.91
HDAC4-216ENST00000544989 ODF3L1Q8IXM7 274 aa9.35□□□□□ -0.91
HDAC4-216ENST00000544989 STPG2Q8N412 459 aa9.35□□□□□ -0.91
HDAC4-216ENST00000544989 FAM71E2Q8N5Q1 922 aa9.35□□□□□ -0.91
HDAC4-216ENST00000544989 ZNF436-AS1Q8NC38 126 aaPredicted RBP9.35□□□□□ -0.91
HDAC4-216ENST00000544989 RNF5Q99942 180 aa9.35□□□□□ -0.91
HDAC4-216ENST00000544989 NABP2Q9BQ15 211 aa9.35□□□□□ -0.91
HDAC4-216ENST00000544989 HDHD3Q9BSH5 251 aaPredicted RBP9.35□□□□□ -0.91
HDAC4-216ENST00000544989 MRPL20Q9BYC9 149 aaKnown RBP9.35□□□□□ -0.91
HDAC4-216ENST00000544989 TOLLIPQ9H0E2 274 aa9.35□□□□□ -0.91
HDAC4-216ENST00000544989 PLSCR3Q9NRY6 295 aa9.35□□□□□ -0.91
HDAC4-216ENST00000544989 ZFP57Q9NU63 452 aa9.35□□□□□ -0.91
HDAC4-216ENST00000544989 KIAA1456Q9P272 454 aa9.35□□□□□ -0.91
HDAC4-216ENST00000544989 ZNF221Q9UK13 617 aa9.35□□□□□ -0.91
HDAC4-216ENST00000544989 SH2D7A6NKC9 451 aaPredicted RBP9.34□□□□□ -0.91
HDAC4-216ENST00000544989 ADARB2-AS1A8MUL3 147 aa9.34□□□□□ -0.91
HDAC4-216ENST00000544989 MFNGO00587 321 aa9.34□□□□□ -0.91
HDAC4-216ENST00000544989 ST8SIA5O15466 376 aa9.34□□□□□ -0.91
HDAC4-216ENST00000544989 FABP7O15540 132 aa9.34□□□□□ -0.91
HDAC4-216ENST00000544989 FCGR3AP08637 254 aa9.34□□□□□ -0.91
HDAC4-216ENST00000544989 CD36P16671 472 aa9.34□□□□□ -0.91
HDAC4-216ENST00000544989 DTYMKP23919 212 aa9.34□□□□□ -0.91
HDAC4-216ENST00000544989 PITPNAQ00169 270 aa9.34□□□□□ -0.91
HDAC4-216ENST00000544989 DEFA6Q01524 100 aa9.34□□□□□ -0.91
HDAC4-216ENST00000544989 ARFRP1Q13795 201 aa9.34□□□□□ -0.91
HDAC4-216ENST00000544989 NEDD8Q15843 81 aa9.34□□□□□ -0.91
HDAC4-216ENST00000544989 KHDC1LQ5JSQ8 128 aa9.34□□□□□ -0.91
HDAC4-216ENST00000544989 SFXN4Q6P4A7 337 aa9.34□□□□□ -0.91
HDAC4-216ENST00000544989 TEX38Q6PEX7 206 aa9.34□□□□□ -0.91
HDAC4-216ENST00000544989 Q6ZS49 121 aa9.34□□□□□ -0.91
HDAC4-216ENST00000544989 CROCCP3Q8IVE0 287 aa9.34□□□□□ -0.91
HDAC4-216ENST00000544989 OR10J5Q8NHC4 309 aa9.34□□□□□ -0.91
HDAC4-216ENST00000544989 AGMATQ9BSE5 352 aa9.34□□□□□ -0.91
HDAC4-216ENST00000544989 ATG5Q9H1Y0 275 aa9.34□□□□□ -0.91
HDAC4-216ENST00000544989 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP9.34□□□□□ -0.91
HDAC4-216ENST00000544989 DAPK2Q9UIK4 370 aa9.34□□□□□ -0.91
HDAC4-216ENST00000544989 KCNK7Q9Y2U2 307 aa9.34□□□□□ -0.91
HDAC4-216ENST00000544989 ETV7Q9Y603 341 aa9.34□□□□□ -0.91
HDAC4-216ENST00000544989 LOC100506127A0A0U1RQW1 187 aa9.33□□□□□ -0.92
HDAC4-216ENST00000544989 ZNF736B4DX44 427 aaPredicted RBP9.33□□□□□ -0.92
HDAC4-216ENST00000544989 NBR2O15453 112 aa9.33□□□□□ -0.92
HDAC4-216ENST00000544989 PF4P02776 101 aa9.33□□□□□ -0.92
HDAC4-216ENST00000544989 GSTP1P09211 210 aaKnown RBP9.33□□□□□ -0.92
HDAC4-216ENST00000544989 SCTP09683 121 aa9.33□□□□□ -0.92
HDAC4-216ENST00000544989 CTXN2P0C2S0 81 aa9.33□□□□□ -0.92
HDAC4-216ENST00000544989 GNB3P16520 340 aa9.33□□□□□ -0.92
HDAC4-216ENST00000544989 VDAC1P21796 283 aa9.33□□□□□ -0.92
HDAC4-216ENST00000544989 SDC2P34741 201 aa9.33□□□□□ -0.92
HDAC4-216ENST00000544989 OR3A3P47888 321 aa9.33□□□□□ -0.92
HDAC4-216ENST00000544989 ACTBP60709 375 aa9.33□□□□□ -0.92
HDAC4-216ENST00000544989 TAGLNQ01995 201 aaKnown RBP9.33□□□□□ -0.92
HDAC4-216ENST00000544989 PNLIPRP3Q17RR3 467 aa9.33□□□□□ -0.92
HDAC4-216ENST00000544989 Q6ZPA2 131 aa9.33□□□□□ -0.92
HDAC4-216ENST00000544989 NR2C2APQ86WQ0 139 aa9.33□□□□□ -0.92
HDAC4-216ENST00000544989 TSPAN14Q8NG11 270 aa9.33□□□□□ -0.92
HDAC4-216ENST00000544989 NPBQ8NG41 125 aa9.33□□□□□ -0.92
HDAC4-216ENST00000544989 CABLES2Q9BTV7 478 aa9.33□□□□□ -0.92
HDAC4-216ENST00000544989 C11orf54Q9H0W9 315 aaPredicted RBP9.33□□□□□ -0.92
HDAC4-216ENST00000544989 OR51E2Q9H255 320 aa9.33□□□□□ -0.92
HDAC4-216ENST00000544989 DCSTAMPQ9H295 470 aa9.33□□□□□ -0.92
HDAC4-216ENST00000544989 ZNF107Q9UII5 783 aaPredicted RBP9.33□□□□□ -0.92
HDAC4-216ENST00000544989 WASHC3Q9Y3C0 194 aa9.33□□□□□ -0.92
HDAC4-216ENST00000544989 NOTCH3Q9UM47 2321 aa9.32□□□□□ -0.92
HDAC4-216ENST00000544989 A0A075B6Q4 140 aa9.32□□□□□ -0.92
HDAC4-216ENST00000544989 A0A0A6YYH2 397 aa9.32□□□□□ -0.92
HDAC4-216ENST00000544989 A0A1W2PRX2 142 aa9.32□□□□□ -0.92
HDAC4-216ENST00000544989 A6NJ64 397 aa9.32□□□□□ -0.92
HDAC4-216ENST00000544989 DUS4LO95620 317 aaKnown RBP9.32□□□□□ -0.92
HDAC4-216ENST00000544989 HLA-DRB1P01911 266 aa9.32□□□□□ -0.92
HDAC4-216ENST00000544989 APOA2P02652 100 aa9.32□□□□□ -0.92
HDAC4-216ENST00000544989 IGF1P05019 195 aa9.32□□□□□ -0.92
HDAC4-216ENST00000544989 ELANEP08246 267 aa9.32□□□□□ -0.92
HDAC4-216ENST00000544989 SLC2A2P11168 524 aaPredicted RBP9.32□□□□□ -0.92
HDAC4-216ENST00000544989 CD33P20138 364 aa9.32□□□□□ -0.92
HDAC4-216ENST00000544989 F2RL1P55085 397 aa9.32□□□□□ -0.92
HDAC4-216ENST00000544989 RPL23AP62750 156 aaKnown RBP9.32□□□□□ -0.92
HDAC4-216ENST00000544989 PLA2G7Q13093 441 aa9.32□□□□□ -0.92
HDAC4-216ENST00000544989 FOXE3Q13461 319 aa9.32□□□□□ -0.92
HDAC4-216ENST00000544989 MOGAT2Q3SYC2 334 aa9.32□□□□□ -0.92
HDAC4-216ENST00000544989 CDNFQ49AH0 187 aa9.32□□□□□ -0.92
HDAC4-216ENST00000544989 TCTEX1D4Q5JR98 221 aa9.32□□□□□ -0.92
HDAC4-216ENST00000544989 CXorf66Q5JRM2 361 aaPredicted RBP9.32□□□□□ -0.92
HDAC4-216ENST00000544989 HACD4Q5VWC8 232 aa9.32□□□□□ -0.92
HDAC4-216ENST00000544989 ZNF329Q86UD4 541 aa9.32□□□□□ -0.92
HDAC4-216ENST00000544989 OR5AN1Q8NGI8 311 aa9.32□□□□□ -0.92
HDAC4-216ENST00000544989 CYYR1Q96J86 154 aa9.32□□□□□ -0.92
HDAC4-216ENST00000544989 NOL4LQ96MY1 436 aaPredicted RBP9.32□□□□□ -0.92
HDAC4-216ENST00000544989 GINS4Q9BRT9 223 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms