RNA–Protein interactions for RNA: ENST00000541005.1

LTBR-208, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 583 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-208ENST00000541005 GSTP1P09211 210 aaKnown RBP10.4□□□□□ -0.74
LTBR-208ENST00000541005 SMIM18P0DKX4 95 aa10.4□□□□□ -0.74
LTBR-208ENST00000541005 DTYMKP23919 212 aa10.4□□□□□ -0.74
LTBR-208ENST00000541005 OR3A3P47888 321 aa10.4□□□□□ -0.74
LTBR-208ENST00000541005 ARSJQ5FYB0 599 aaPredicted RBP10.4□□□□□ -0.74
LTBR-208ENST00000541005 CROCCP3Q8IVE0 287 aa10.4□□□□□ -0.74
LTBR-208ENST00000541005 SLC25A38Q96DW6 304 aa10.4□□□□□ -0.74
LTBR-208ENST00000541005 NABP2Q9BQ15 211 aa10.4□□□□□ -0.74
LTBR-208ENST00000541005 PLSCR3Q9NRY6 295 aa10.4□□□□□ -0.74
LTBR-208ENST00000541005 LIN7CQ9NUP9 197 aaKnown RBP10.4□□□□□ -0.74
LTBR-208ENST00000541005 A0A075B6Q4 140 aa10.39□□□□□ -0.75
LTBR-208ENST00000541005 A0A0A6YYH2 397 aa10.39□□□□□ -0.75
LTBR-208ENST00000541005 A6NJ64 397 aa10.39□□□□□ -0.75
LTBR-208ENST00000541005 SH2D7A6NKC9 451 aaPredicted RBP10.39□□□□□ -0.75
LTBR-208ENST00000541005 HSPA12AO43301 675 aa10.39□□□□□ -0.75
LTBR-208ENST00000541005 PEX14O75381 377 aa10.39□□□□□ -0.75
LTBR-208ENST00000541005 TSPAN15O95858 294 aa10.39□□□□□ -0.75
LTBR-208ENST00000541005 IGHG2P01859 326 aa10.39□□□□□ -0.75
LTBR-208ENST00000541005 CEACAM6P40199 344 aa10.39□□□□□ -0.75
LTBR-208ENST00000541005 PITPNAQ00169 270 aa10.39□□□□□ -0.75
LTBR-208ENST00000541005 HNF4GQ14541 408 aa10.39□□□□□ -0.75
LTBR-208ENST00000541005 IDNKQ5T6J7 187 aa10.39□□□□□ -0.75
LTBR-208ENST00000541005 HACD4Q5VWC8 232 aa10.39□□□□□ -0.75
LTBR-208ENST00000541005 FAM71E2Q8N5Q1 922 aa10.39□□□□□ -0.75
LTBR-208ENST00000541005 Q8N9W7 124 aa10.39□□□□□ -0.75
LTBR-208ENST00000541005 OR13F1Q8NGS4 319 aa10.39□□□□□ -0.75
LTBR-208ENST00000541005 OR5H6Q8NGV6 325 aa10.39□□□□□ -0.75
LTBR-208ENST00000541005 C11orf54Q9H0W9 315 aaPredicted RBP10.39□□□□□ -0.75
LTBR-208ENST00000541005 TRBV6-7A0A0A0MS04 114 aa10.38□□□□□ -0.75
LTBR-208ENST00000541005 OR5H14A6NHG9 310 aa10.38□□□□□ -0.75
LTBR-208ENST00000541005 ADARB2-AS1A8MUL3 147 aa10.38□□□□□ -0.75
LTBR-208ENST00000541005 CD28P10747 220 aa10.38□□□□□ -0.75
LTBR-208ENST00000541005 TGFBR1P36897 503 aa10.38□□□□□ -0.75
LTBR-208ENST00000541005 ARFRP1Q13795 201 aa10.38□□□□□ -0.75
LTBR-208ENST00000541005 PNLIPRP3Q17RR3 467 aa10.38□□□□□ -0.75
LTBR-208ENST00000541005 ZNF260Q3ZCT1 412 aa10.38□□□□□ -0.75
LTBR-208ENST00000541005 CDNFQ49AH0 187 aa10.38□□□□□ -0.75
LTBR-208ENST00000541005 NDUFA11Q86Y39 141 aa10.38□□□□□ -0.75
LTBR-208ENST00000541005 S1PR3Q99500 378 aa10.38□□□□□ -0.75
LTBR-208ENST00000541005 ABCG5Q9H222 651 aa10.38□□□□□ -0.75
LTBR-208ENST00000541005 DCSTAMPQ9H295 470 aa10.38□□□□□ -0.75
LTBR-208ENST00000541005 RDH8Q9NYR8 311 aa10.38□□□□□ -0.75
LTBR-208ENST00000541005 ZNF230Q9UIE0 474 aaPredicted RBP10.38□□□□□ -0.75
LTBR-208ENST00000541005 ELF5Q9UKW6 265 aaPredicted RBP10.38□□□□□ -0.75
LTBR-208ENST00000541005 SPATA2Q9UM82 520 aa10.38□□□□□ -0.75
LTBR-208ENST00000541005 TMEM235A6NFC5 223 aa10.37□□□□□ -0.75
LTBR-208ENST00000541005 CSF1P09603 554 aa10.37□□□□□ -0.75
LTBR-208ENST00000541005 GSTT2P0CG29 244 aa10.37□□□□□ -0.75
LTBR-208ENST00000541005 GSTT2BP0CG30 244 aa10.37□□□□□ -0.75
LTBR-208ENST00000541005 TALDO1P37837 337 aa10.37□□□□□ -0.75
LTBR-208ENST00000541005 RPS19P39019 145 aaKnown RBP10.37□□□□□ -0.75
LTBR-208ENST00000541005 CD83Q01151 205 aa10.37□□□□□ -0.75
LTBR-208ENST00000541005 RPL39P5Q59GN2 51 aa10.37□□□□□ -0.75
LTBR-208ENST00000541005 IGSF11Q5DX21 431 aa10.37□□□□□ -0.75
LTBR-208ENST00000541005 C11orf44Q8N8P7 122 aa10.37□□□□□ -0.75
LTBR-208ENST00000541005 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.37□□□□□ -0.75
LTBR-208ENST00000541005 OR5AU1Q8NGC0 362 aa10.37□□□□□ -0.75
LTBR-208ENST00000541005 OR5AN1Q8NGI8 311 aa10.37□□□□□ -0.75
LTBR-208ENST00000541005 OR10J5Q8NHC4 309 aa10.37□□□□□ -0.75
LTBR-208ENST00000541005 ABHD14BQ96IU4 210 aa10.37□□□□□ -0.75
LTBR-208ENST00000541005 CITED2Q99967 270 aaPredicted RBP10.37□□□□□ -0.75
LTBR-208ENST00000541005 FUNDC2Q9BWH2 189 aa10.37□□□□□ -0.75
LTBR-208ENST00000541005 ZNF580Q9UK33 172 aa10.37□□□□□ -0.75
LTBR-208ENST00000541005 IGKV1D-8A0A087WSZ0 117 aa10.36□□□□□ -0.75
LTBR-208ENST00000541005 NCBP2LA6PVI3 153 aaKnown RBP10.36□□□□□ -0.75
LTBR-208ENST00000541005 H0YJW9 148 aa10.36□□□□□ -0.75
LTBR-208ENST00000541005 KCNAB3O43448 404 aa10.36□□□□□ -0.75
LTBR-208ENST00000541005 SSX5O60225 188 aa10.36□□□□□ -0.75
LTBR-208ENST00000541005 PROP1O75360 226 aa10.36□□□□□ -0.75
LTBR-208ENST00000541005 CT45A6P0DMU7 189 aa10.36□□□□□ -0.75
LTBR-208ENST00000541005 CT45A5P0DMU8 189 aa10.36□□□□□ -0.75
LTBR-208ENST00000541005 CT45A7P0DMV0 189 aa10.36□□□□□ -0.75
LTBR-208ENST00000541005 GPR12P47775 334 aa10.36□□□□□ -0.75
LTBR-208ENST00000541005 F2RL1P55085 397 aa10.36□□□□□ -0.75
LTBR-208ENST00000541005 ACTBP60709 375 aa10.36□□□□□ -0.75
LTBR-208ENST00000541005 TCTEX1D4Q5JR98 221 aa10.36□□□□□ -0.75
LTBR-208ENST00000541005 C9orf152Q5JTZ5 239 aa10.36□□□□□ -0.75
LTBR-208ENST00000541005 SLC35E3Q7Z769 313 aa10.36□□□□□ -0.75
LTBR-208ENST00000541005 CENPVQ7Z7K6 275 aaPredicted RBP10.36□□□□□ -0.75
LTBR-208ENST00000541005 H1FOOQ8IZA3 346 aaPredicted RBP10.36□□□□□ -0.75
LTBR-208ENST00000541005 CHPT1Q8WUD6 406 aa10.36□□□□□ -0.75
LTBR-208ENST00000541005 NUDCD2Q8WVJ2 157 aa10.36□□□□□ -0.75
LTBR-208ENST00000541005 MAFIPQ8WZ33 124 aa10.36□□□□□ -0.75
LTBR-208ENST00000541005 SLC25A46Q96AG3 418 aa10.36□□□□□ -0.75
LTBR-208ENST00000541005 PHF21AQ96BD5 680 aa10.36□□□□□ -0.75
LTBR-208ENST00000541005 KCTD12Q96CX2 325 aaKnown RBP10.36□□□□□ -0.75
LTBR-208ENST00000541005 GAB2Q9UQC2 676 aa10.36□□□□□ -0.75
LTBR-208ENST00000541005 PSMB11A5LHX3 300 aa10.35□□□□□ -0.75
LTBR-208ENST00000541005 AP4M1O00189 453 aa10.35□□□□□ -0.75
LTBR-208ENST00000541005 BET1O15155 118 aa10.35□□□□□ -0.75
LTBR-208ENST00000541005 RBBP9O75884 186 aa10.35□□□□□ -0.75
LTBR-208ENST00000541005 GABARAPO95166 117 aa10.35□□□□□ -0.75
LTBR-208ENST00000541005 NDUFA3O95167 84 aa10.35□□□□□ -0.75
LTBR-208ENST00000541005 MC5RP33032 325 aa10.35□□□□□ -0.75
LTBR-208ENST00000541005 GNG2P59768 71 aa10.35□□□□□ -0.75
LTBR-208ENST00000541005 NCS1P62166 190 aa10.35□□□□□ -0.75
LTBR-208ENST00000541005 LSM3P62310 102 aaKnown RBP10.35□□□□□ -0.75
LTBR-208ENST00000541005 MMDQ15546 238 aa10.35□□□□□ -0.75
LTBR-208ENST00000541005 UBE2NLQ5JXB2 153 aa10.35□□□□□ -0.75
LTBR-208ENST00000541005 FAM131AQ6UXB0 335 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms