RNA–Protein interactions for RNA: ENST00000540017.6

SNRPA1-203, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 1 (best)

Gene SNRPA1, Length 506 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-203ENST00000540017 SCAND1P57086 179 aa14.52□□□□□ -0.09
SNRPA1-203ENST00000540017 NCS1P62166 190 aa14.52□□□□□ -0.09
SNRPA1-203ENST00000540017 ZNF260Q3ZCT1 412 aa14.52□□□□□ -0.09
SNRPA1-203ENST00000540017 RPL39P5Q59GN2 51 aa14.52□□□□□ -0.09
SNRPA1-203ENST00000540017 HACD4Q5VWC8 232 aa14.52□□□□□ -0.09
SNRPA1-203ENST00000540017 OR4A4PQ8NGN8 299 aa14.52□□□□□ -0.09
SNRPA1-203ENST00000540017 CABLES2Q9BTV7 478 aa14.52□□□□□ -0.09
SNRPA1-203ENST00000540017 NAA50Q9GZZ1 169 aaKnown RBP14.52□□□□□ -0.09
SNRPA1-203ENST00000540017 ETV7Q9Y603 341 aa14.52□□□□□ -0.09
SNRPA1-203ENST00000540017 VWFP04275 2813 aa14.52□□□□□ -0.09
SNRPA1-203ENST00000540017 NBEAL1Q6ZS30 2694 aa14.51□□□□□ -0.09
SNRPA1-203ENST00000540017 CMYA5Q8N3K9 4069 aa14.51□□□□□ -0.09
SNRPA1-203ENST00000540017 BET1O15155 118 aa14.51□□□□□ -0.09
SNRPA1-203ENST00000540017 FGF16O43320 207 aa14.51□□□□□ -0.09
SNRPA1-203ENST00000540017 SSX5O60225 188 aa14.51□□□□□ -0.09
SNRPA1-203ENST00000540017 PROP1O75360 226 aa14.51□□□□□ -0.09
SNRPA1-203ENST00000540017 MOSP00540 346 aa14.51□□□□□ -0.09
SNRPA1-203ENST00000540017 F2RL1P55085 397 aa14.51□□□□□ -0.09
SNRPA1-203ENST00000540017 VBP1P61758 197 aa14.51□□□□□ -0.09
SNRPA1-203ENST00000540017 Q8N9W7 124 aa14.51□□□□□ -0.09
SNRPA1-203ENST00000540017 NUDCD2Q8WVJ2 157 aa14.51□□□□□ -0.09
SNRPA1-203ENST00000540017 RITA1Q96K30 269 aa14.51□□□□□ -0.09
SNRPA1-203ENST00000540017 RDH8Q9NYR8 311 aa14.51□□□□□ -0.09
SNRPA1-203ENST00000540017 RNF150Q9ULK6 438 aa14.51□□□□□ -0.09
SNRPA1-203ENST00000540017 SPATA2Q9UM82 520 aa14.51□□□□□ -0.09
SNRPA1-203ENST00000540017 TRBV6-7A0A0A0MS04 114 aa14.5□□□□□ -0.09
SNRPA1-203ENST00000540017 NCBP2LA6PVI3 153 aaKnown RBP14.5□□□□□ -0.09
SNRPA1-203ENST00000540017 RAB29O14966 203 aa14.5□□□□□ -0.09
SNRPA1-203ENST00000540017 TSPAN15O95858 294 aa14.5□□□□□ -0.09
SNRPA1-203ENST00000540017 GSTP1P09211 210 aaKnown RBP14.5□□□□□ -0.09
SNRPA1-203ENST00000540017 TALDO1P37837 337 aa14.5□□□□□ -0.09
SNRPA1-203ENST00000540017 KIR2DS1Q14954 304 aa14.5□□□□□ -0.09
SNRPA1-203ENST00000540017 ARL6IP1Q15041 203 aa14.5□□□□□ -0.09
SNRPA1-203ENST00000540017 C10orf99Q6UWK7 81 aa14.5□□□□□ -0.09
SNRPA1-203ENST00000540017 TREML4Q6UXN2 200 aa14.5□□□□□ -0.09
SNRPA1-203ENST00000540017 Q6ZS49 121 aa14.5□□□□□ -0.09
SNRPA1-203ENST00000540017 TOLLIPQ9H0E2 274 aa14.5□□□□□ -0.09
SNRPA1-203ENST00000540017 PIPOXQ9P0Z9 390 aa14.5□□□□□ -0.09
SNRPA1-203ENST00000540017 TRAV18A0A075B6X5 111 aa14.49□□□□□ -0.09
SNRPA1-203ENST00000540017 LINC01548A6NM66 108 aa14.49□□□□□ -0.09
SNRPA1-203ENST00000540017 M0QZ24 198 aa14.49□□□□□ -0.09
SNRPA1-203ENST00000540017 PEX14O75381 377 aa14.49□□□□□ -0.09
SNRPA1-203ENST00000540017 FBXO24O75426 580 aa14.49□□□□□ -0.09
SNRPA1-203ENST00000540017 SCGNO76038 276 aa14.49□□□□□ -0.09
SNRPA1-203ENST00000540017 CT45A6P0DMU7 189 aa14.49□□□□□ -0.09
SNRPA1-203ENST00000540017 CT45A5P0DMU8 189 aa14.49□□□□□ -0.09
SNRPA1-203ENST00000540017 CT45A7P0DMV0 189 aa14.49□□□□□ -0.09
SNRPA1-203ENST00000540017 DTYMKP23919 212 aa14.49□□□□□ -0.09
SNRPA1-203ENST00000540017 SRSF7Q16629 238 aaKnown RBP eCLIP14.49□□□□□ -0.09
SNRPA1-203ENST00000540017 CROCCP3Q8IVE0 287 aa14.49□□□□□ -0.09
SNRPA1-203ENST00000540017 EDARADDQ8WWZ3 215 aa14.49□□□□□ -0.09
SNRPA1-203ENST00000540017 S1PR3Q99500 378 aa14.49□□□□□ -0.09
SNRPA1-203ENST00000540017 ST6GALNAC5Q9BVH7 336 aa14.49□□□□□ -0.09
SNRPA1-203ENST00000540017 MRPS26Q9BYN8 205 aaKnown RBP14.49□□□□□ -0.09
SNRPA1-203ENST00000540017 TET2Q6N021 2002 aaPredicted RBP14.49□□□□□ -0.09
SNRPA1-203ENST00000540017 TMEM127O75204 238 aa14.48□□□□□ -0.09
SNRPA1-203ENST00000540017 TFAP2AP05549 437 aa14.48□□□□□ -0.09
SNRPA1-203ENST00000540017 PTHLHP12272 177 aa14.48□□□□□ -0.09
SNRPA1-203ENST00000540017 CNTFRP26992 372 aa14.48□□□□□ -0.09
SNRPA1-203ENST00000540017 ALDH3B2P48448 385 aa14.48□□□□□ -0.09
SNRPA1-203ENST00000540017 SERPINB10P48595 397 aa14.48□□□□□ -0.09
SNRPA1-203ENST00000540017 LINC00205P59089 165 aa14.48□□□□□ -0.09
SNRPA1-203ENST00000540017 CTF1Q16619 201 aa14.48□□□□□ -0.09
SNRPA1-203ENST00000540017 TCTEX1D4Q5JR98 221 aa14.48□□□□□ -0.09
SNRPA1-203ENST00000540017 FAM71F2Q6NXP2 309 aa14.48□□□□□ -0.09
SNRPA1-203ENST00000540017 GLDNQ6ZMI3 551 aaPredicted RBP14.48□□□□□ -0.09
SNRPA1-203ENST00000540017 OR5AU1Q8NGC0 362 aa14.48□□□□□ -0.09
SNRPA1-203ENST00000540017 OR10J5Q8NHC4 309 aa14.48□□□□□ -0.09
SNRPA1-203ENST00000540017 SLC25A46Q96AG3 418 aa14.48□□□□□ -0.09
SNRPA1-203ENST00000540017 NOL4LQ96MY1 436 aaPredicted RBP14.48□□□□□ -0.09
SNRPA1-203ENST00000540017 CITED2Q99967 270 aaPredicted RBP14.48□□□□□ -0.09
SNRPA1-203ENST00000540017 GNG2P59768 71 aa14.47□□□□□ -0.09
SNRPA1-203ENST00000540017 PNLIPRP3Q17RR3 467 aa14.47□□□□□ -0.09
SNRPA1-203ENST00000540017 FAM131AQ6UXB0 335 aa14.47□□□□□ -0.09
SNRPA1-203ENST00000540017 CENPVQ7Z7K6 275 aaPredicted RBP14.47□□□□□ -0.09
SNRPA1-203ENST00000540017 ANKRD13BQ86YJ7 626 aa14.47□□□□□ -0.09
SNRPA1-203ENST00000540017 FAM71E2Q8N5Q1 922 aa14.47□□□□□ -0.09
SNRPA1-203ENST00000540017 DRAXINQ8NBI3 349 aaPredicted RBP14.47□□□□□ -0.09
SNRPA1-203ENST00000540017 ABCG5Q9H222 651 aa14.47□□□□□ -0.09
SNRPA1-203ENST00000540017 LINC00527Q9UJ94 153 aa14.47□□□□□ -0.09
SNRPA1-203ENST00000540017 WNK1Q9H4A3 2382 aa14.46□□□□□ -0.09
SNRPA1-203ENST00000540017 MGAM2Q2M2H8 2515 aa14.46□□□□□ -0.09
SNRPA1-203ENST00000540017 ADARB2-AS1A8MUL3 147 aa14.46□□□□□ -0.09
SNRPA1-203ENST00000540017 GABARAPO95166 117 aa14.46□□□□□ -0.09
SNRPA1-203ENST00000540017 DIRAS3O95661 229 aa14.46□□□□□ -0.09
SNRPA1-203ENST00000540017 IGHG2P01859 326 aa14.46□□□□□ -0.09
SNRPA1-203ENST00000540017 OR8U9P0C7N5 309 aa14.46□□□□□ -0.09
SNRPA1-203ENST00000540017 ACTBP60709 375 aa14.46□□□□□ -0.09
SNRPA1-203ENST00000540017 PITPNAQ00169 270 aa14.46□□□□□ -0.09
SNRPA1-203ENST00000540017 GPR107Q5VW38 600 aa14.46□□□□□ -0.09
SNRPA1-203ENST00000540017 OR8H1Q8NGG4 311 aa14.46□□□□□ -0.09
SNRPA1-203ENST00000540017 OR8U1Q8NH10 309 aa14.46□□□□□ -0.09
SNRPA1-203ENST00000540017 PHF21AQ96BD5 680 aa14.46□□□□□ -0.09
SNRPA1-203ENST00000540017 C5orf30Q96GV9 206 aa14.46□□□□□ -0.09
SNRPA1-203ENST00000540017 DCSTAMPQ9H295 470 aa14.46□□□□□ -0.09
SNRPA1-203ENST00000540017 GHITMQ9H3K2 345 aa14.46□□□□□ -0.09
SNRPA1-203ENST00000540017 AUNIPQ9H7T9 357 aa14.46□□□□□ -0.09
SNRPA1-203ENST00000540017 LIN7CQ9NUP9 197 aaKnown RBP14.46□□□□□ -0.09
SNRPA1-203ENST00000540017 ZNF221Q9UK13 617 aa14.46□□□□□ -0.09
SNRPA1-203ENST00000540017 A0A0A6YYH2 397 aa14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms