RNA–Protein interactions for RNA: ENST00000539687.5

SPARC-209, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 5

Gene SPARC, Length 511 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-209ENST00000539687 IGLV2-14P01704 120 aa8.49□□□□□ -1.05
SPARC-209ENST00000539687 THBDP07204 575 aa8.49□□□□□ -1.05
SPARC-209ENST00000539687 SULT1A2P50226 295 aa8.49□□□□□ -1.05
SPARC-209ENST00000539687 CAV2P51636 162 aa8.49□□□□□ -1.05
SPARC-209ENST00000539687 EWSR1Q01844 656 aaKnown RBP eCLIP8.49□□□□□ -1.05
SPARC-209ENST00000539687 TLE1Q04724 770 aa8.49□□□□□ -1.05
SPARC-209ENST00000539687 MIDNQ504T8 468 aa8.49□□□□□ -1.05
SPARC-209ENST00000539687 PRR30Q53SZ7 412 aaPredicted RBP8.49□□□□□ -1.05
SPARC-209ENST00000539687 COMMD1Q8N668 190 aa8.49□□□□□ -1.05
SPARC-209ENST00000539687 BOLLQ8N9W6 283 aaKnown RBP8.49□□□□□ -1.05
SPARC-209ENST00000539687 DMBX1Q8NFW5 382 aa8.49□□□□□ -1.05
SPARC-209ENST00000539687 OR52L2PQ8NGH6 319 aa8.49□□□□□ -1.05
SPARC-209ENST00000539687 OR13A1Q8NGR1 328 aa8.49□□□□□ -1.05
SPARC-209ENST00000539687 CORO2AQ92828 525 aa8.49□□□□□ -1.05
SPARC-209ENST00000539687 MARC2Q969Z3 335 aa8.49□□□□□ -1.05
SPARC-209ENST00000539687 CXorf58Q96LI9 332 aa8.49□□□□□ -1.05
SPARC-209ENST00000539687 GINS3Q9BRX5 216 aa8.49□□□□□ -1.05
SPARC-209ENST00000539687 DYNLRB1Q9NP97 96 aa8.49□□□□□ -1.05
SPARC-209ENST00000539687 TAS2R3Q9NYW6 316 aa8.49□□□□□ -1.05
SPARC-209ENST00000539687 STRAPQ9Y3F4 350 aaKnown RBP8.49□□□□□ -1.05
SPARC-209ENST00000539687 INTS1Q8N201 2190 aaKnown RBP8.48□□□□□ -1.05
SPARC-209ENST00000539687 IGSF10Q6WRI0 2623 aa8.48□□□□□ -1.05
SPARC-209ENST00000539687 TRAV39A0A0B4J263 110 aa8.48□□□□□ -1.05
SPARC-209ENST00000539687 hADV38S2A0JD32 116 aa8.48□□□□□ -1.05
SPARC-209ENST00000539687 FAM90A9PA6NNJ1 464 aa8.48□□□□□ -1.05
SPARC-209ENST00000539687 UMAD1C9J7I0 102 aa8.48□□□□□ -1.05
SPARC-209ENST00000539687 CCL21O00585 134 aa8.48□□□□□ -1.05
SPARC-209ENST00000539687 TOR1AO14656 332 aa8.48□□□□□ -1.05
SPARC-209ENST00000539687 SIGLEC5O15389 551 aa8.48□□□□□ -1.05
SPARC-209ENST00000539687 RBFOX2O43251 390 aaKnown RBP eCLIP8.48□□□□□ -1.05
SPARC-209ENST00000539687 SSSCA1O60232 199 aa8.48□□□□□ -1.05
SPARC-209ENST00000539687 CLDN1O95832 211 aa8.48□□□□□ -1.05
SPARC-209ENST00000539687 PRB1P04280 392 aa8.48□□□□□ -1.05
SPARC-209ENST00000539687 ZNF16P17020 682 aaPredicted RBP8.48□□□□□ -1.05
SPARC-209ENST00000539687 APOBEC3AP31941 199 aaPredicted RBP8.48□□□□□ -1.05
SPARC-209ENST00000539687 GPR12P47775 334 aa8.48□□□□□ -1.05
SPARC-209ENST00000539687 EDDM3BP56851 147 aa8.48□□□□□ -1.05
SPARC-209ENST00000539687 MEF2CQ06413 473 aaPredicted RBP8.48□□□□□ -1.05
SPARC-209ENST00000539687 Q3ZCU0 254 aa8.48□□□□□ -1.05
SPARC-209ENST00000539687 RPL7L1Q6DKI1 246 aaKnown RBP8.48□□□□□ -1.05
SPARC-209ENST00000539687 ZNF788Q6ZQV5 615 aa8.48□□□□□ -1.05
SPARC-209ENST00000539687 TMEM252Q8N6L7 170 aa8.48□□□□□ -1.05
SPARC-209ENST00000539687 TCTEX1D2Q8WW35 142 aa8.48□□□□□ -1.05
SPARC-209ENST00000539687 TMED6Q8WW62 240 aa8.48□□□□□ -1.05
SPARC-209ENST00000539687 GPR146Q96CH1 333 aa8.48□□□□□ -1.05
SPARC-209ENST00000539687 GNPNAT1Q96EK6 184 aaPredicted RBP8.48□□□□□ -1.05
SPARC-209ENST00000539687 ADTRPQ96IZ2 230 aa8.48□□□□□ -1.05
SPARC-209ENST00000539687 CIB3Q96Q77 187 aaPredicted RBP8.48□□□□□ -1.05
SPARC-209ENST00000539687 REG4Q9BYZ8 158 aa8.48□□□□□ -1.05
SPARC-209ENST00000539687 GAL3ST2Q9H3Q3 398 aa8.48□□□□□ -1.05
SPARC-209ENST00000539687 C11orf1Q9H5F2 150 aa8.48□□□□□ -1.05
SPARC-209ENST00000539687 SAP30LQ9HAJ7 183 aa8.48□□□□□ -1.05
SPARC-209ENST00000539687 BARX1Q9HBU1 254 aaPredicted RBP8.48□□□□□ -1.05
SPARC-209ENST00000539687 PARP11Q9NR21 331 aa8.48□□□□□ -1.05
SPARC-209ENST00000539687 MMP26Q9NRE1 261 aa8.48□□□□□ -1.05
SPARC-209ENST00000539687 CALYQ9NYX4 217 aa8.48□□□□□ -1.05
SPARC-209ENST00000539687 PRELID3BQ9Y3B1 194 aa8.48□□□□□ -1.05
SPARC-209ENST00000539687 SMG1Q96Q15 3661 aaKnown RBP8.48□□□□□ -1.05
SPARC-209ENST00000539687 KBTBD11-OT1A0A1B0GTJ5 212 aa8.47□□□□□ -1.05
SPARC-209ENST00000539687 ZNF705EA8MWA4 302 aaPredicted RBP8.47□□□□□ -1.05
SPARC-209ENST00000539687 TRIM77I1YAP6 450 aa8.47□□□□□ -1.05
SPARC-209ENST00000539687 RAB29O14966 203 aa8.47□□□□□ -1.05
SPARC-209ENST00000539687 SYNGR2O43760 224 aa8.47□□□□□ -1.05
SPARC-209ENST00000539687 CLDN14O95500 239 aa8.47□□□□□ -1.05
SPARC-209ENST00000539687 FSTL3O95633 263 aa8.47□□□□□ -1.05
SPARC-209ENST00000539687 CD80P33681 288 aa8.47□□□□□ -1.05
SPARC-209ENST00000539687 SSTR5P35346 364 aa8.47□□□□□ -1.05
SPARC-209ENST00000539687 LPAR6P43657 344 aa8.47□□□□□ -1.05
SPARC-209ENST00000539687 F2RL1P55085 397 aa8.47□□□□□ -1.05
SPARC-209ENST00000539687 POLR2GP62487 172 aaKnown RBP eCLIP8.47□□□□□ -1.05
SPARC-209ENST00000539687 HBG1P69891 147 aa8.47□□□□□ -1.05
SPARC-209ENST00000539687 HBG2P69892 147 aa8.47□□□□□ -1.05
SPARC-209ENST00000539687 EIF4EBP1Q13541 118 aaPredicted RBP8.47□□□□□ -1.05
SPARC-209ENST00000539687 MORN2Q502X0 79 aa8.47□□□□□ -1.05
SPARC-209ENST00000539687 FAM74A1Q5RGS3 127 aa8.47□□□□□ -1.05
SPARC-209ENST00000539687 SPAG16Q8N0X2 631 aa8.47□□□□□ -1.05
SPARC-209ENST00000539687 SMIM8Q96KF7 97 aa8.47□□□□□ -1.05
SPARC-209ENST00000539687 WFIKKN1Q96NZ8 548 aa8.47□□□□□ -1.05
SPARC-209ENST00000539687 LINC00574Q9H8X3 128 aa8.47□□□□□ -1.05
SPARC-209ENST00000539687 CLN8Q9UBY8 286 aa8.47□□□□□ -1.05
SPARC-209ENST00000539687 CACNG5Q9UF02 275 aa8.47□□□□□ -1.05
SPARC-209ENST00000539687 RNF115Q9Y4L5 304 aa8.47□□□□□ -1.05
SPARC-209ENST00000539687 LAMA5O15230 3695 aa8.47□□□□□ -1.05
SPARC-209ENST00000539687 PPIAL4EA0A075B759 164 aa8.46□□□□□ -1.06
SPARC-209ENST00000539687 IGHV3OR15-7A0A075B7D8 119 aa8.46□□□□□ -1.06
SPARC-209ENST00000539687 PPIAL4DF5H284 164 aa8.46□□□□□ -1.06
SPARC-209ENST00000539687 KCNAB3O43448 404 aa8.46□□□□□ -1.06
SPARC-209ENST00000539687 HPRT1P00492 218 aa8.46□□□□□ -1.06
SPARC-209ENST00000539687 IFNA5P01569 189 aa8.46□□□□□ -1.06
SPARC-209ENST00000539687 PPIAL4FP0DN26 164 aa8.46□□□□□ -1.06
SPARC-209ENST00000539687 SPP1P10451 314 aa8.46□□□□□ -1.06
SPARC-209ENST00000539687 PPP1CCP36873 323 aaKnown RBP8.46□□□□□ -1.06
SPARC-209ENST00000539687 SULT1A1P50225 295 aa8.46□□□□□ -1.06
SPARC-209ENST00000539687 ERVK-16P61578 105 aa8.46□□□□□ -1.06
SPARC-209ENST00000539687 ESPL1Q14674 2120 aa8.46□□□□□ -1.06
SPARC-209ENST00000539687 ZNF585BQ52M93 769 aa8.46□□□□□ -1.06
SPARC-209ENST00000539687 CXorf66Q5JRM2 361 aaPredicted RBP8.46□□□□□ -1.06
SPARC-209ENST00000539687 ADAM5Q6NVV9 412 aa8.46□□□□□ -1.06
SPARC-209ENST00000539687 DPPA3Q6W0C5 159 aa8.46□□□□□ -1.06
SPARC-209ENST00000539687 C5orf24Q7Z6I8 188 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms