RNA–Protein interactions for RNA: ENST00000539047.1

VAMP1-207, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 4

Gene VAMP1, Length 565 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-207ENST00000539047 SEC22CQ9BRL7 303 aa12.66□□□□□ -0.38
VAMP1-207ENST00000539047 RTBDNQ9BSG5 229 aaPredicted RBP12.66□□□□□ -0.38
VAMP1-207ENST00000539047 TMEM133Q9H2Q1 129 aa12.66□□□□□ -0.38
VAMP1-207ENST00000539047 NAA60Q9H7X0 242 aa12.66□□□□□ -0.38
VAMP1-207ENST00000539047 METTL8Q9H825 291 aaKnown RBP12.66□□□□□ -0.38
VAMP1-207ENST00000539047 LIN7CQ9NUP9 197 aaKnown RBP12.66□□□□□ -0.38
VAMP1-207ENST00000539047 PIPOXQ9P0Z9 390 aa12.66□□□□□ -0.38
VAMP1-207ENST00000539047 AMMECR1Q9Y4X0 333 aaPredicted RBP12.66□□□□□ -0.38
VAMP1-207ENST00000539047 KPTNQ9Y664 436 aa12.66□□□□□ -0.38
VAMP1-207ENST00000539047 PDZD2O15018 2839 aa12.66□□□□□ -0.38
VAMP1-207ENST00000539047 ARID1AO14497 2285 aa12.65□□□□□ -0.38
VAMP1-207ENST00000539047 A0A0B4J293 547 aa12.65□□□□□ -0.38
VAMP1-207ENST00000539047 CRYM-AS1A6NIL9 109 aa12.65□□□□□ -0.38
VAMP1-207ENST00000539047 RAB29O14966 203 aa12.65□□□□□ -0.38
VAMP1-207ENST00000539047 CD34P28906 385 aa12.65□□□□□ -0.38
VAMP1-207ENST00000539047 GNRHRP30968 328 aa12.65□□□□□ -0.38
VAMP1-207ENST00000539047 DHRS2Q13268 280 aa12.65□□□□□ -0.38
VAMP1-207ENST00000539047 C1orf122Q6ZSJ8 110 aa12.65□□□□□ -0.38
VAMP1-207ENST00000539047 KCTD9Q7L273 389 aa12.65□□□□□ -0.38
VAMP1-207ENST00000539047 C8orf31Q8N9H6 132 aa12.65□□□□□ -0.38
VAMP1-207ENST00000539047 OR9G1Q8NH87 305 aa12.65□□□□□ -0.38
VAMP1-207ENST00000539047 CASTOR1Q8WTX7 329 aa12.65□□□□□ -0.38
VAMP1-207ENST00000539047 CAPSLQ8WWF8 208 aa12.65□□□□□ -0.38
VAMP1-207ENST00000539047 S1PR3Q99500 378 aa12.65□□□□□ -0.38
VAMP1-207ENST00000539047 CLEC7AQ9BXN2 247 aa12.65□□□□□ -0.38
VAMP1-207ENST00000539047 PARP12Q9H0J9 701 aaKnown RBP12.65□□□□□ -0.38
VAMP1-207ENST00000539047 HEXA-AS1Q9H8Q6 139 aa12.65□□□□□ -0.38
VAMP1-207ENST00000539047 ANKRD17O75179 2603 aaKnown RBP12.65□□□□□ -0.38
VAMP1-207ENST00000539047 A0A087X0M5 115 aa12.64□□□□□ -0.39
VAMP1-207ENST00000539047 A0A1B0GX30 115 aa12.64□□□□□ -0.39
VAMP1-207ENST00000539047 C9orf170A2RU37 121 aa12.64□□□□□ -0.39
VAMP1-207ENST00000539047 MPPED1O15442 326 aa12.64□□□□□ -0.39
VAMP1-207ENST00000539047 MMP23AO75900 390 aa12.64□□□□□ -0.39
VAMP1-207ENST00000539047 SFT2D2O95562 160 aa12.64□□□□□ -0.39
VAMP1-207ENST00000539047 DUS4LO95620 317 aaKnown RBP12.64□□□□□ -0.39
VAMP1-207ENST00000539047 RRAS2P62070 204 aaPredicted RBP12.64□□□□□ -0.39
VAMP1-207ENST00000539047 ARF6P62330 175 aa12.64□□□□□ -0.39
VAMP1-207ENST00000539047 NCR3LG1Q68D85 454 aa12.64□□□□□ -0.39
VAMP1-207ENST00000539047 SLC25A48Q6ZT89 311 aaKnown RBP12.64□□□□□ -0.39
VAMP1-207ENST00000539047 TBC1D26Q86UD7 250 aa12.64□□□□□ -0.39
VAMP1-207ENST00000539047 LYG1Q8N1E2 194 aa12.64□□□□□ -0.39
VAMP1-207ENST00000539047 C12orf45Q8N5I9 185 aaPredicted RBP12.64□□□□□ -0.39
VAMP1-207ENST00000539047 DRAM1Q8N682 238 aa12.64□□□□□ -0.39
VAMP1-207ENST00000539047 ZNF596Q8TC21 504 aa12.64□□□□□ -0.39
VAMP1-207ENST00000539047 LEAP2Q969E1 77 aa12.64□□□□□ -0.39
VAMP1-207ENST00000539047 HSD17B10Q99714 261 aaKnown RBP12.64□□□□□ -0.39
VAMP1-207ENST00000539047 RNF150Q9ULK6 438 aa12.64□□□□□ -0.39
VAMP1-207ENST00000539047 POLR3KQ9Y2Y1 108 aaPredicted RBP12.64□□□□□ -0.39
VAMP1-207ENST00000539047 POLQO75417 2590 aa12.64□□□□□ -0.39
VAMP1-207ENST00000539047 C3orf85A0A1B0GTC6 90 aa12.63□□□□□ -0.39
VAMP1-207ENST00000539047 B4DSR2 109 aa12.63□□□□□ -0.39
VAMP1-207ENST00000539047 PFDN1O60925 122 aa12.63□□□□□ -0.39
VAMP1-207ENST00000539047 IGHV3-7P01780 117 aa12.63□□□□□ -0.39
VAMP1-207ENST00000539047 MSMBP08118 114 aa12.63□□□□□ -0.39
VAMP1-207ENST00000539047 TRAPPC2P0DI81 140 aa12.63□□□□□ -0.39
VAMP1-207ENST00000539047 TRAPPC2BP0DI82 140 aa12.63□□□□□ -0.39
VAMP1-207ENST00000539047 ZNF16P17020 682 aaPredicted RBP12.63□□□□□ -0.39
VAMP1-207ENST00000539047 ZFP36P26651 326 aaKnown RBP12.63□□□□□ -0.39
VAMP1-207ENST00000539047 DVL1P1P54792 670 aaPredicted RBP12.63□□□□□ -0.39
VAMP1-207ENST00000539047 DHODHQ02127 395 aa12.63□□□□□ -0.39
VAMP1-207ENST00000539047 SLC9A3R2Q15599 337 aa12.63□□□□□ -0.39
VAMP1-207ENST00000539047 LIN54Q6MZP7 749 aa12.63□□□□□ -0.39
VAMP1-207ENST00000539047 ZNF66Q6ZN08 573 aa12.63□□□□□ -0.39
VAMP1-207ENST00000539047 ABHD12Q8N2K0 398 aa12.63□□□□□ -0.39
VAMP1-207ENST00000539047 UXS1Q8NBZ7 420 aa12.63□□□□□ -0.39
VAMP1-207ENST00000539047 ZNF439Q8NDP4 499 aa12.63□□□□□ -0.39
VAMP1-207ENST00000539047 OR52B4Q8NGK2 314 aa12.63□□□□□ -0.39
VAMP1-207ENST00000539047 TMEM230Q96A57 120 aa12.63□□□□□ -0.39
VAMP1-207ENST00000539047 ABHD14BQ96IU4 210 aa12.63□□□□□ -0.39
VAMP1-207ENST00000539047 Q96MF0 132 aa12.63□□□□□ -0.39
VAMP1-207ENST00000539047 IFI27L2Q9H2X8 130 aa12.63□□□□□ -0.39
VAMP1-207ENST00000539047 LPAR2Q9HBW0 351 aa12.63□□□□□ -0.39
VAMP1-207ENST00000539047 MALRD1Q5VYJ5 2156 aa12.63□□□□□ -0.39
VAMP1-207ENST00000539047 IGHV2-26A0A0B4J1V2 119 aa12.62□□□□□ -0.39
VAMP1-207ENST00000539047 TRAV20A0A0B4J274 112 aa12.62□□□□□ -0.39
VAMP1-207ENST00000539047 HMX3A6NHT5 357 aa12.62□□□□□ -0.39
VAMP1-207ENST00000539047 FAM157AC9JC47 383 aa12.62□□□□□ -0.39
VAMP1-207ENST00000539047 H0Y980 276 aa12.62□□□□□ -0.39
VAMP1-207ENST00000539047 J3QR06 171 aa12.62□□□□□ -0.39
VAMP1-207ENST00000539047 TNFSF12O43508 249 aa12.62□□□□□ -0.39
VAMP1-207ENST00000539047 PGLYRP1O75594 196 aaPredicted RBP12.62□□□□□ -0.39
VAMP1-207ENST00000539047 TOX4O94842 621 aa12.62□□□□□ -0.39
VAMP1-207ENST00000539047 COX7A1P24310 79 aa12.62□□□□□ -0.39
VAMP1-207ENST00000539047 LOXL1Q08397 574 aaPredicted RBP12.62□□□□□ -0.39
VAMP1-207ENST00000539047 CT45A1Q5HYN5 189 aa12.62□□□□□ -0.39
VAMP1-207ENST00000539047 FAM71F2Q6NXP2 309 aa12.62□□□□□ -0.39
VAMP1-207ENST00000539047 CADM3Q8N126 398 aa12.62□□□□□ -0.39
VAMP1-207ENST00000539047 LINC00311Q8N616 119 aa12.62□□□□□ -0.39
VAMP1-207ENST00000539047 TCTEX1D1Q8N7M0 179 aa12.62□□□□□ -0.39
VAMP1-207ENST00000539047 OR51H1Q8NH63 302 aa12.62□□□□□ -0.39
VAMP1-207ENST00000539047 CT45A3Q8NHU0 189 aa12.62□□□□□ -0.39
VAMP1-207ENST00000539047 TCTEX1D2Q8WW35 142 aa12.62□□□□□ -0.39
VAMP1-207ENST00000539047 GALNT14Q96FL9 552 aa12.62□□□□□ -0.39
VAMP1-207ENST00000539047 ADTRPQ96IZ2 230 aa12.62□□□□□ -0.39
VAMP1-207ENST00000539047 GAB2Q9UQC2 676 aa12.62□□□□□ -0.39
VAMP1-207ENST00000539047 PRELID3BQ9Y3B1 194 aa12.62□□□□□ -0.39
VAMP1-207ENST00000539047 CSMD2Q7Z408 3487 aa12.61□□□□□ -0.39
VAMP1-207ENST00000539047 SAA2-SAA4A0A096LPE2 208 aa12.61□□□□□ -0.39
VAMP1-207ENST00000539047 A0A0B4J2A0 478 aa12.61□□□□□ -0.39
VAMP1-207ENST00000539047 A0A1W2PPE3 182 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms