RNA–Protein interactions for RNA: ENST00000538862.6

CDCA3-207, Transcript of cell division cycle associated 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDCA3, Length 1,943 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-207ENST00000538862 ERVK11-1P61568 191 aa12.29□□□□□ -0.44
CDCA3-207ENST00000538862 ICAM4Q14773 271 aa12.29□□□□□ -0.44
CDCA3-207ENST00000538862 TESK1Q15569 626 aa12.29□□□□□ -0.44
CDCA3-207ENST00000538862 HAGHQ16775 308 aa12.29□□□□□ -0.44
CDCA3-207ENST00000538862 TBC1D28Q2M2D7 210 aa12.29□□□□□ -0.44
CDCA3-207ENST00000538862 KHDC3LQ587J8 217 aa12.29□□□□□ -0.44
CDCA3-207ENST00000538862 OR10G4Q8NGN3 311 aa12.29□□□□□ -0.44
CDCA3-207ENST00000538862 CLDND2Q8NHS1 167 aa12.29□□□□□ -0.44
CDCA3-207ENST00000538862 RNASE11Q8TAA1 199 aaKnown RBP12.29□□□□□ -0.44
CDCA3-207ENST00000538862 IL1F10Q8WWZ1 152 aa12.29□□□□□ -0.44
CDCA3-207ENST00000538862 TCEAL7Q9BRU2 100 aa12.29□□□□□ -0.44
CDCA3-207ENST00000538862 C12orf49Q9H741 205 aa12.29□□□□□ -0.44
CDCA3-207ENST00000538862 OR1A1Q9P1Q5 309 aa12.29□□□□□ -0.44
CDCA3-207ENST00000538862 LIPGQ9Y5X9 500 aa12.29□□□□□ -0.44
CDCA3-207ENST00000538862 SVILO95425 2214 aa12.29□□□□□ -0.44
CDCA3-207ENST00000538862 UBR5O95071 2799 aaPredicted RBP12.29□□□□□ -0.44
CDCA3-207ENST00000538862 SLC33A1O00400 549 aaPredicted RBP12.28□□□□□ -0.44
CDCA3-207ENST00000538862 SYNGR2O43760 224 aa12.28□□□□□ -0.44
CDCA3-207ENST00000538862 IGHV2-5P01817 119 aa12.28□□□□□ -0.44
CDCA3-207ENST00000538862 CD46P15529 392 aa12.28□□□□□ -0.44
CDCA3-207ENST00000538862 MRPL49Q13405 166 aaKnown RBP12.28□□□□□ -0.44
CDCA3-207ENST00000538862 ADAM5Q6NVV9 412 aa12.28□□□□□ -0.44
CDCA3-207ENST00000538862 WDYHV1Q96HA8 205 aa12.28□□□□□ -0.44
CDCA3-207ENST00000538862 OR51B6Q9H340 312 aa12.28□□□□□ -0.44
CDCA3-207ENST00000538862 RNF150Q9ULK6 438 aa12.28□□□□□ -0.44
CDCA3-207ENST00000538862 COL12A1Q99715 3063 aa12.28□□□□□ -0.44
CDCA3-207ENST00000538862 OR2H2O95918 312 aa12.27□□□□□ -0.44
CDCA3-207ENST00000538862 IFNA17P01571 189 aa12.27□□□□□ -0.44
CDCA3-207ENST00000538862 IGKV1-39P01597 117 aa12.27□□□□□ -0.44
CDCA3-207ENST00000538862 IGKV1D-39P04432 117 aa12.27□□□□□ -0.44
CDCA3-207ENST00000538862 S100A9P06702 114 aaKnown RBP12.27□□□□□ -0.44
CDCA3-207ENST00000538862 S100PP25815 95 aa12.27□□□□□ -0.44
CDCA3-207ENST00000538862 HEPN1Q6WQI6 88 aa12.27□□□□□ -0.44
CDCA3-207ENST00000538862 Q6ZRM9 215 aa12.27□□□□□ -0.44
CDCA3-207ENST00000538862 THNSL2Q86YJ6 484 aa12.27□□□□□ -0.44
CDCA3-207ENST00000538862 ZADH2Q8N4Q0 377 aa12.27□□□□□ -0.44
CDCA3-207ENST00000538862 SCCPDHQ8NBX0 429 aa12.27□□□□□ -0.44
CDCA3-207ENST00000538862 RAB39BQ96DA2 213 aa12.27□□□□□ -0.44
CDCA3-207ENST00000538862 MUCL1Q96DR8 90 aa12.27□□□□□ -0.44
CDCA3-207ENST00000538862 MBNL3Q9NUK0 354 aaKnown RBP12.27□□□□□ -0.44
CDCA3-207ENST00000538862 LIN7CQ9NUP9 197 aaKnown RBP12.27□□□□□ -0.44
CDCA3-207ENST00000538862 CACNG5Q9UF02 275 aa12.27□□□□□ -0.44
CDCA3-207ENST00000538862 WIPI2Q9Y4P8 454 aa12.27□□□□□ -0.44
CDCA3-207ENST00000538862 A0A1W2PPE3 182 aa12.27□□□□□ -0.45
CDCA3-207ENST00000538862 OR8U8P0C7N1 319 aa12.27□□□□□ -0.45
CDCA3-207ENST00000538862 ZNF146Q15072 292 aa12.27□□□□□ -0.45
CDCA3-207ENST00000538862 ACSF3Q4G176 576 aaPredicted RBP12.27□□□□□ -0.45
CDCA3-207ENST00000538862 SLC25A24Q6NUK1 477 aa12.27□□□□□ -0.45
CDCA3-207ENST00000538862 IGFL3Q6UXB1 125 aa12.27□□□□□ -0.45
CDCA3-207ENST00000538862 ZNF429Q86V71 674 aa12.27□□□□□ -0.45
CDCA3-207ENST00000538862 SCGB1C1Q8TD33 95 aa12.27□□□□□ -0.45
CDCA3-207ENST00000538862 TVP23CQ96ET8 276 aa12.27□□□□□ -0.45
CDCA3-207ENST00000538862 PSMG3Q9BT73 122 aaPredicted RBP12.27□□□□□ -0.45
CDCA3-207ENST00000538862 SEBOXQ9HB31 216 aaPredicted RBP12.27□□□□□ -0.45
CDCA3-207ENST00000538862 GSN-AS1Q9NRJ2 163 aa12.27□□□□□ -0.45
CDCA3-207ENST00000538862 TRAPPC2LQ9UL33 140 aa12.27□□□□□ -0.45
CDCA3-207ENST00000538862 SIRPB1O00241 398 aa12.26□□□□□ -0.45
CDCA3-207ENST00000538862 SH2D1BO14796 132 aa12.26□□□□□ -0.45
CDCA3-207ENST00000538862 IGKV1-5P01602 117 aa12.26□□□□□ -0.45
CDCA3-207ENST00000538862 PGA5P0DJD9 388 aa12.26□□□□□ -0.45
CDCA3-207ENST00000538862 UBE2KP61086 200 aa12.26□□□□□ -0.45
CDCA3-207ENST00000538862 PPP1CBP62140 327 aa12.26□□□□□ -0.45
CDCA3-207ENST00000538862 FABP9Q0Z7S8 132 aa12.26□□□□□ -0.45
CDCA3-207ENST00000538862 SPATA46Q5T0L3 261 aa12.26□□□□□ -0.45
CDCA3-207ENST00000538862 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.26□□□□□ -0.45
CDCA3-207ENST00000538862 SLC35E3Q7Z769 313 aa12.26□□□□□ -0.45
CDCA3-207ENST00000538862 WDR86Q86TI4 376 aa12.26□□□□□ -0.45
CDCA3-207ENST00000538862 NIPSNAP3BQ9BS92 247 aa12.26□□□□□ -0.45
CDCA3-207ENST00000538862 DEFB127Q9H1M4 99 aa12.26□□□□□ -0.45
CDCA3-207ENST00000538862 SIRT7Q9NRC8 400 aa12.26□□□□□ -0.45
CDCA3-207ENST00000538862 MED12LQ86YW9 2145 aa12.26□□□□□ -0.45
CDCA3-207ENST00000538862 DOCK7Q96N67 2140 aa12.26□□□□□ -0.45
CDCA3-207ENST00000538862 LOC102723971A0A1B0GUV8 181 aa12.25□□□□□ -0.45
CDCA3-207ENST00000538862 A0A1W2PR80 420 aa12.25□□□□□ -0.45
CDCA3-207ENST00000538862 CXorf65A6NEN9 183 aa12.25□□□□□ -0.45
CDCA3-207ENST00000538862 RNF212BA8MTL3 300 aa12.25□□□□□ -0.45
CDCA3-207ENST00000538862 H3BP45 60 aa12.25□□□□□ -0.45
CDCA3-207ENST00000538862 AP4M1O00189 453 aa12.25□□□□□ -0.45
CDCA3-207ENST00000538862 SMPD2O60906 423 aa12.25□□□□□ -0.45
CDCA3-207ENST00000538862 TAGLN2P37802 199 aaKnown RBP12.25□□□□□ -0.45
CDCA3-207ENST00000538862 RAB4BP61018 213 aa12.25□□□□□ -0.45
CDCA3-207ENST00000538862 HBG1P69891 147 aa12.25□□□□□ -0.45
CDCA3-207ENST00000538862 HBG2P69892 147 aa12.25□□□□□ -0.45
CDCA3-207ENST00000538862 TMEM267Q0VDI3 215 aaPredicted RBP12.25□□□□□ -0.45
CDCA3-207ENST00000538862 ZNF585BQ52M93 769 aa12.25□□□□□ -0.45
CDCA3-207ENST00000538862 IGFL2Q6UWQ7 119 aa12.25□□□□□ -0.45
CDCA3-207ENST00000538862 CYB561D1Q8N8Q1 229 aa12.25□□□□□ -0.45
CDCA3-207ENST00000538862 MBD3L1Q8WWY6 194 aa12.25□□□□□ -0.45
CDCA3-207ENST00000538862 PARD6GQ9BYG4 376 aaPredicted RBP12.25□□□□□ -0.45
CDCA3-207ENST00000538862 PSENENQ9NZ42 101 aa12.25□□□□□ -0.45
CDCA3-207ENST00000538862 PPP1R3CQ9UQK1 317 aa12.25□□□□□ -0.45
CDCA3-207ENST00000538862 RBM7Q9Y580 266 aaKnown RBP12.25□□□□□ -0.45
CDCA3-207ENST00000538862 TRGV5A0A0B4J1U4 118 aa12.25□□□□□ -0.45
CDCA3-207ENST00000538862 FAM90A26D6RGX4 464 aa12.25□□□□□ -0.45
CDCA3-207ENST00000538862 RAC2P15153 192 aa12.25□□□□□ -0.45
CDCA3-207ENST00000538862 DLK1P80370 383 aa12.25□□□□□ -0.45
CDCA3-207ENST00000538862 SERF2P84101 59 aa12.25□□□□□ -0.45
CDCA3-207ENST00000538862 GABRA6Q16445 453 aa12.25□□□□□ -0.45
CDCA3-207ENST00000538862 IZUMO4Q1ZYL8 232 aa12.25□□□□□ -0.45
CDCA3-207ENST00000538862 LRRC75BQ2VPJ9 315 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms