RNA–Protein interactions for RNA: ENST00000537164.1

SFSWAP-205, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 961 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-205ENST00000537164 FOXRED2Q8IWF2 684 aa13.57□□□□□ -0.24
SFSWAP-205ENST00000537164 STPG2Q8N412 459 aa13.57□□□□□ -0.24
SFSWAP-205ENST00000537164 NOL4LQ96MY1 436 aaPredicted RBP13.57□□□□□ -0.24
SFSWAP-205ENST00000537164 PARP12Q9H0J9 701 aaKnown RBP13.57□□□□□ -0.24
SFSWAP-205ENST00000537164 OR51E2Q9H255 320 aa13.57□□□□□ -0.24
SFSWAP-205ENST00000537164 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.57□□□□□ -0.24
SFSWAP-205ENST00000537164 OR1A1Q9P1Q5 309 aa13.57□□□□□ -0.24
SFSWAP-205ENST00000537164 ZNF580Q9UK33 172 aa13.57□□□□□ -0.24
SFSWAP-205ENST00000537164 A0A0B4J203 849 aa13.56□□□□□ -0.24
SFSWAP-205ENST00000537164 TCRBV4S1A1TA0A5B7 111 aa13.56□□□□□ -0.24
SFSWAP-205ENST00000537164 LINC01548A6NM66 108 aa13.56□□□□□ -0.24
SFSWAP-205ENST00000537164 AP4M1O00189 453 aa13.56□□□□□ -0.24
SFSWAP-205ENST00000537164 ST8SIA5O15466 376 aa13.56□□□□□ -0.24
SFSWAP-205ENST00000537164 CD3GP09693 182 aa13.56□□□□□ -0.24
SFSWAP-205ENST00000537164 SLC2A2P11168 524 aaPredicted RBP13.56□□□□□ -0.24
SFSWAP-205ENST00000537164 CEACAM6P40199 344 aa13.56□□□□□ -0.24
SFSWAP-205ENST00000537164 ARL6IP1Q15041 203 aa13.56□□□□□ -0.24
SFSWAP-205ENST00000537164 KPRPQ5T749 579 aaPredicted RBP13.56□□□□□ -0.24
SFSWAP-205ENST00000537164 SAMD5Q5TGI4 173 aa13.56□□□□□ -0.24
SFSWAP-205ENST00000537164 Q6ZS49 121 aa13.56□□□□□ -0.24
SFSWAP-205ENST00000537164 COMMD1Q8N668 190 aa13.56□□□□□ -0.24
SFSWAP-205ENST00000537164 WFDC9Q8NEX5 89 aa13.56□□□□□ -0.24
SFSWAP-205ENST00000537164 OR4A4PQ8NGN8 299 aa13.56□□□□□ -0.24
SFSWAP-205ENST00000537164 KCTD7Q96MP8 289 aa13.56□□□□□ -0.24
SFSWAP-205ENST00000537164 RASL11BQ9BPW5 248 aa13.56□□□□□ -0.24
SFSWAP-205ENST00000537164 C11orf54Q9H0W9 315 aaPredicted RBP13.56□□□□□ -0.24
SFSWAP-205ENST00000537164 PRKDCP78527 4128 aaKnown RBP13.56□□□□□ -0.24
SFSWAP-205ENST00000537164 FCGR3AP08637 254 aa13.55□□□□□ -0.24
SFSWAP-205ENST00000537164 GNB3P16520 340 aa13.55□□□□□ -0.24
SFSWAP-205ENST00000537164 SERPINB10P48595 397 aa13.55□□□□□ -0.24
SFSWAP-205ENST00000537164 SCAND1P57086 179 aa13.55□□□□□ -0.24
SFSWAP-205ENST00000537164 ACTBP60709 375 aa13.55□□□□□ -0.24
SFSWAP-205ENST00000537164 SFXN4Q6P4A7 337 aa13.55□□□□□ -0.24
SFSWAP-205ENST00000537164 ZNF329Q86UD4 541 aa13.55□□□□□ -0.24
SFSWAP-205ENST00000537164 NPBQ8NG41 125 aa13.55□□□□□ -0.24
SFSWAP-205ENST00000537164 RBMXL1Q96E39 390 aaKnown RBP13.55□□□□□ -0.24
SFSWAP-205ENST00000537164 CABLES2Q9BTV7 478 aa13.55□□□□□ -0.24
SFSWAP-205ENST00000537164 GON7Q9BXV9 100 aa13.55□□□□□ -0.24
SFSWAP-205ENST00000537164 OR5H14A6NHG9 310 aa13.54□□□□□ -0.24
SFSWAP-205ENST00000537164 HSPA12AO43301 675 aa13.54□□□□□ -0.24
SFSWAP-205ENST00000537164 PROP1O75360 226 aa13.54□□□□□ -0.24
SFSWAP-205ENST00000537164 NDUFA3O95167 84 aa13.54□□□□□ -0.24
SFSWAP-205ENST00000537164 IGF1P05019 195 aa13.54□□□□□ -0.24
SFSWAP-205ENST00000537164 CT45A6P0DMU7 189 aa13.54□□□□□ -0.24
SFSWAP-205ENST00000537164 CT45A5P0DMU8 189 aa13.54□□□□□ -0.24
SFSWAP-205ENST00000537164 CT45A7P0DMV0 189 aa13.54□□□□□ -0.24
SFSWAP-205ENST00000537164 CD36P16671 472 aa13.54□□□□□ -0.24
SFSWAP-205ENST00000537164 SDC2P34741 201 aa13.54□□□□□ -0.24
SFSWAP-205ENST00000537164 SOX6P35712 828 aa13.54□□□□□ -0.24
SFSWAP-205ENST00000537164 SLC35B1P78383 322 aa13.54□□□□□ -0.24
SFSWAP-205ENST00000537164 MRPS15P82914 257 aaKnown RBP13.54□□□□□ -0.24
SFSWAP-205ENST00000537164 KIR2DS1Q14954 304 aa13.54□□□□□ -0.24
SFSWAP-205ENST00000537164 NEDD8Q15843 81 aa13.54□□□□□ -0.24
SFSWAP-205ENST00000537164 PDLIM3Q53GG5 364 aaPredicted RBP13.54□□□□□ -0.24
SFSWAP-205ENST00000537164 RPL39P5Q59GN2 51 aa13.54□□□□□ -0.24
SFSWAP-205ENST00000537164 OR5AN1Q8NGI8 311 aa13.54□□□□□ -0.24
SFSWAP-205ENST00000537164 PHF21AQ96BD5 680 aa13.54□□□□□ -0.24
SFSWAP-205ENST00000537164 ABHD14BQ96IU4 210 aa13.54□□□□□ -0.24
SFSWAP-205ENST00000537164 RITA1Q96K30 269 aa13.54□□□□□ -0.24
SFSWAP-205ENST00000537164 CENPOQ9BU64 300 aa13.54□□□□□ -0.24
SFSWAP-205ENST00000537164 ZFP57Q9NU63 452 aa13.54□□□□□ -0.24
SFSWAP-205ENST00000537164 TRBV6-7A0A0A0MS04 114 aa13.53□□□□□ -0.24
SFSWAP-205ENST00000537164 A0A1W2PRX2 142 aa13.53□□□□□ -0.24
SFSWAP-205ENST00000537164 SMIM30A4D0T7 59 aa13.53□□□□□ -0.24
SFSWAP-205ENST00000537164 G3V4G9 280 aa13.53□□□□□ -0.24
SFSWAP-205ENST00000537164 FABP7O15540 132 aa13.53□□□□□ -0.24
SFSWAP-205ENST00000537164 SCGNO76038 276 aa13.53□□□□□ -0.24
SFSWAP-205ENST00000537164 HLA-DRB1P01911 266 aa13.53□□□□□ -0.24
SFSWAP-205ENST00000537164 SLC6A1P30531 599 aa13.53□□□□□ -0.24
SFSWAP-205ENST00000537164 MC5RP33032 325 aa13.53□□□□□ -0.24
SFSWAP-205ENST00000537164 CFHR3Q02985 330 aa13.53□□□□□ -0.24
SFSWAP-205ENST00000537164 MMDQ15546 238 aa13.53□□□□□ -0.24
SFSWAP-205ENST00000537164 BEAN1Q3B7T3 259 aa13.53□□□□□ -0.24
SFSWAP-205ENST00000537164 RNF152Q8N8N0 203 aa13.53□□□□□ -0.24
SFSWAP-205ENST00000537164 HSPB9Q9BQS6 159 aa13.53□□□□□ -0.24
SFSWAP-205ENST00000537164 CHCHD6Q9BRQ6 235 aa13.53□□□□□ -0.24
SFSWAP-205ENST00000537164 ATG5Q9H1Y0 275 aa13.53□□□□□ -0.24
SFSWAP-205ENST00000537164 RDH8Q9NYR8 311 aa13.53□□□□□ -0.24
SFSWAP-205ENST00000537164 DAPK2Q9UIK4 370 aa13.53□□□□□ -0.24
SFSWAP-205ENST00000537164 LINC00527Q9UJ94 153 aa13.53□□□□□ -0.24
SFSWAP-205ENST00000537164 DNAH3Q8TD57 4116 aa13.53□□□□□ -0.24
SFSWAP-205ENST00000537164 H0YJW9 148 aa13.52□□□□□ -0.25
SFSWAP-205ENST00000537164 NBR2O15453 112 aa13.52□□□□□ -0.25
SFSWAP-205ENST00000537164 RRP9O43818 475 aaKnown RBP13.52□□□□□ -0.25
SFSWAP-205ENST00000537164 TMEM127O75204 238 aa13.52□□□□□ -0.25
SFSWAP-205ENST00000537164 TNFAIP8O95379 198 aa13.52□□□□□ -0.25
SFSWAP-205ENST00000537164 DTYMKP23919 212 aa13.52□□□□□ -0.25
SFSWAP-205ENST00000537164 RPL23AP62750 156 aaKnown RBP13.52□□□□□ -0.25
SFSWAP-205ENST00000537164 PNLIPRP3Q17RR3 467 aa13.52□□□□□ -0.25
SFSWAP-205ENST00000537164 TEX38Q6PEX7 206 aa13.52□□□□□ -0.25
SFSWAP-205ENST00000537164 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.52□□□□□ -0.25
SFSWAP-205ENST00000537164 RNF5Q99942 180 aa13.52□□□□□ -0.25
SFSWAP-205ENST00000537164 RNF167Q9H6Y7 350 aa13.52□□□□□ -0.25
SFSWAP-205ENST00000537164 GAB2Q9UQC2 676 aa13.52□□□□□ -0.25
SFSWAP-205ENST00000537164 TRIM64CA6NLI5 447 aa13.51□□□□□ -0.25
SFSWAP-205ENST00000537164 RBBP9O75884 186 aa13.51□□□□□ -0.25
SFSWAP-205ENST00000537164 GSTT2P0CG29 244 aa13.51□□□□□ -0.25
SFSWAP-205ENST00000537164 GSTT2BP0CG30 244 aa13.51□□□□□ -0.25
SFSWAP-205ENST00000537164 PF4V1P10720 104 aa13.51□□□□□ -0.25
SFSWAP-205ENST00000537164 CNTFRP26992 372 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms