RNA–Protein interactions for RNA: ENST00000536398.5

UBE3B-206, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-206ENST00000536398 CD3GP09693 182 aa11.25□□□□□ -0.61
UBE3B-206ENST00000536398 RAB6AP20340 208 aa11.25□□□□□ -0.61
UBE3B-206ENST00000536398 SDC2P34741 201 aa11.25□□□□□ -0.61
UBE3B-206ENST00000536398 MXD1Q05195 221 aa11.25□□□□□ -0.61
UBE3B-206ENST00000536398 KCTD21Q4G0X4 260 aa11.25□□□□□ -0.61
UBE3B-206ENST00000536398 KHDC1LQ5JSQ8 128 aa11.25□□□□□ -0.61
UBE3B-206ENST00000536398 GLDNQ6ZMI3 551 aaPredicted RBP11.25□□□□□ -0.61
UBE3B-206ENST00000536398 C18orf65Q6ZTR6 163 aa11.25□□□□□ -0.61
UBE3B-206ENST00000536398 OR4F17Q8NGA8 305 aa11.25□□□□□ -0.61
UBE3B-206ENST00000536398 OR4X2Q8NGF9 303 aa11.25□□□□□ -0.61
UBE3B-206ENST00000536398 OR4F4Q96R69 305 aa11.25□□□□□ -0.61
UBE3B-206ENST00000536398 HSPB9Q9BQS6 159 aa11.25□□□□□ -0.61
UBE3B-206ENST00000536398 LIN7CQ9NUP9 197 aaKnown RBP11.25□□□□□ -0.61
UBE3B-206ENST00000536398 ZNF230Q9UIE0 474 aaPredicted RBP11.25□□□□□ -0.61
UBE3B-206ENST00000536398 TSSC4Q9Y5U2 329 aaPredicted RBP11.25□□□□□ -0.61
UBE3B-206ENST00000536398 LOC100506127A0A0U1RQW1 187 aa11.24□□□□□ -0.61
UBE3B-206ENST00000536398 TRDCB7Z8K6 153 aa11.24□□□□□ -0.61
UBE3B-206ENST00000536398 HSPA12AO43301 675 aa11.24□□□□□ -0.61
UBE3B-206ENST00000536398 PROP1O75360 226 aa11.24□□□□□ -0.61
UBE3B-206ENST00000536398 FCGR3AP08637 254 aa11.24□□□□□ -0.61
UBE3B-206ENST00000536398 GSTT2P0CG29 244 aa11.24□□□□□ -0.61
UBE3B-206ENST00000536398 GSTT2BP0CG30 244 aa11.24□□□□□ -0.61
UBE3B-206ENST00000536398 CT45A6P0DMU7 189 aa11.24□□□□□ -0.61
UBE3B-206ENST00000536398 CT45A5P0DMU8 189 aa11.24□□□□□ -0.61
UBE3B-206ENST00000536398 CT45A7P0DMV0 189 aa11.24□□□□□ -0.61
UBE3B-206ENST00000536398 SNRPBP14678 240 aaKnown RBP11.24□□□□□ -0.61
UBE3B-206ENST00000536398 HIST1H1DP16402 221 aaKnown RBP11.24□□□□□ -0.61
UBE3B-206ENST00000536398 LINC00205P59089 165 aa11.24□□□□□ -0.61
UBE3B-206ENST00000536398 STPG2Q8N412 459 aa11.24□□□□□ -0.61
UBE3B-206ENST00000536398 FAM71E2Q8N5Q1 922 aa11.24□□□□□ -0.61
UBE3B-206ENST00000536398 RASL11BQ9BPW5 248 aa11.24□□□□□ -0.61
UBE3B-206ENST00000536398 AGMATQ9BSE5 352 aa11.24□□□□□ -0.61
UBE3B-206ENST00000536398 ATG5Q9H1Y0 275 aa11.24□□□□□ -0.61
UBE3B-206ENST00000536398 DAPK2Q9UIK4 370 aa11.24□□□□□ -0.61
UBE3B-206ENST00000536398 RAB29O14966 203 aa11.23□□□□□ -0.61
UBE3B-206ENST00000536398 CD36P16671 472 aa11.23□□□□□ -0.61
UBE3B-206ENST00000536398 ZBTB25P24278 435 aa11.23□□□□□ -0.61
UBE3B-206ENST00000536398 RANBP1P43487 201 aa11.23□□□□□ -0.61
UBE3B-206ENST00000536398 ACTBP60709 375 aa11.23□□□□□ -0.61
UBE3B-206ENST00000536398 OXLD1Q5BKU9 147 aa11.23□□□□□ -0.61
UBE3B-206ENST00000536398 IGSF11Q5DX21 431 aa11.23□□□□□ -0.61
UBE3B-206ENST00000536398 SAMD5Q5TGI4 173 aa11.23□□□□□ -0.61
UBE3B-206ENST00000536398 FAM131AQ6UXB0 335 aa11.23□□□□□ -0.61
UBE3B-206ENST00000536398 LCNL1Q6ZST4 164 aa11.23□□□□□ -0.61
UBE3B-206ENST00000536398 TPRA1Q86W33 373 aa11.23□□□□□ -0.61
UBE3B-206ENST00000536398 DRAXINQ8NBI3 349 aaPredicted RBP11.23□□□□□ -0.61
UBE3B-206ENST00000536398 CHPT1Q8WUD6 406 aa11.23□□□□□ -0.61
UBE3B-206ENST00000536398 CENPOQ9BU64 300 aa11.23□□□□□ -0.61
UBE3B-206ENST00000536398 RDH8Q9NYR8 311 aa11.23□□□□□ -0.61
UBE3B-206ENST00000536398 PIPOXQ9P0Z9 390 aa11.23□□□□□ -0.61
UBE3B-206ENST00000536398 DNAH3Q8TD57 4116 aa11.22□□□□□ -0.61
UBE3B-206ENST00000536398 IGKV1D-8A0A087WSZ0 117 aa11.22□□□□□ -0.61
UBE3B-206ENST00000536398 ITGB1BP1O14713 200 aa11.22□□□□□ -0.61
UBE3B-206ENST00000536398 FABP7O15540 132 aa11.22□□□□□ -0.61
UBE3B-206ENST00000536398 PLXNB1O43157 2135 aa11.22□□□□□ -0.61
UBE3B-206ENST00000536398 PRB2P02812 416 aaPredicted RBP11.22□□□□□ -0.61
UBE3B-206ENST00000536398 TGFBR1P36897 503 aa11.22□□□□□ -0.61
UBE3B-206ENST00000536398 MMDQ15546 238 aa11.22□□□□□ -0.61
UBE3B-206ENST00000536398 BEAN1Q3B7T3 259 aa11.22□□□□□ -0.61
UBE3B-206ENST00000536398 PDLIM3Q53GG5 364 aaPredicted RBP11.22□□□□□ -0.61
UBE3B-206ENST00000536398 SFXN4Q6P4A7 337 aa11.22□□□□□ -0.61
UBE3B-206ENST00000536398 FOXRED2Q8IWF2 684 aa11.22□□□□□ -0.61
UBE3B-206ENST00000536398 OR8H1Q8NGG4 311 aa11.22□□□□□ -0.61
UBE3B-206ENST00000536398 PTX4Q96A99 478 aa11.22□□□□□ -0.61
UBE3B-206ENST00000536398 KCTD7Q96MP8 289 aa11.22□□□□□ -0.61
UBE3B-206ENST00000536398 MGAT4AQ9UM21 535 aa11.22□□□□□ -0.61
UBE3B-206ENST00000536398 METTL21EPA6NDL7 271 aa11.21□□□□□ -0.61
UBE3B-206ENST00000536398 H0YJW9 148 aa11.21□□□□□ -0.61
UBE3B-206ENST00000536398 AP4M1O00189 453 aa11.21□□□□□ -0.61
UBE3B-206ENST00000536398 BET1O15155 118 aa11.21□□□□□ -0.61
UBE3B-206ENST00000536398 PF4V1P10720 104 aa11.21□□□□□ -0.61
UBE3B-206ENST00000536398 SOX6P35712 828 aa11.21□□□□□ -0.61
UBE3B-206ENST00000536398 RPL23AP62750 156 aaKnown RBP11.21□□□□□ -0.61
UBE3B-206ENST00000536398 MRPS15P82914 257 aaKnown RBP11.21□□□□□ -0.61
UBE3B-206ENST00000536398 ARFRP1Q13795 201 aa11.21□□□□□ -0.61
UBE3B-206ENST00000536398 CDNFQ49AH0 187 aa11.21□□□□□ -0.61
UBE3B-206ENST00000536398 FAM71F2Q6NXP2 309 aa11.21□□□□□ -0.61
UBE3B-206ENST00000536398 OR4A4PQ8NGN8 299 aa11.21□□□□□ -0.61
UBE3B-206ENST00000536398 OR5H6Q8NGV6 325 aa11.21□□□□□ -0.61
UBE3B-206ENST00000536398 LGALS14Q8TCE9 139 aa11.21□□□□□ -0.61
UBE3B-206ENST00000536398 ZNF107Q9UII5 783 aaPredicted RBP11.21□□□□□ -0.61
UBE3B-206ENST00000536398 NOTCH3Q9UM47 2321 aa11.2□□□□□ -0.62
UBE3B-206ENST00000536398 PNLIPRP3Q17RR3 467 aa11.2□□□□□ -0.62
UBE3B-206ENST00000536398 ETV3LQ6ZN32 361 aa11.2□□□□□ -0.62
UBE3B-206ENST00000536398 WFDC9Q8NEX5 89 aa11.2□□□□□ -0.62
UBE3B-206ENST00000536398 TSPAN14Q8NG11 270 aa11.2□□□□□ -0.62
UBE3B-206ENST00000536398 NPBQ8NG41 125 aa11.2□□□□□ -0.62
UBE3B-206ENST00000536398 EDARADDQ8WWZ3 215 aa11.2□□□□□ -0.62
UBE3B-206ENST00000536398 PHF21AQ96BD5 680 aa11.2□□□□□ -0.62
UBE3B-206ENST00000536398 C5orf30Q96GV9 206 aa11.2□□□□□ -0.62
UBE3B-206ENST00000536398 TRBV6-7A0A0A0MS04 114 aa11.19□□□□□ -0.62
UBE3B-206ENST00000536398 G3V318 75 aa11.19□□□□□ -0.62
UBE3B-206ENST00000536398 FCN1O00602 326 aa11.19□□□□□ -0.62
UBE3B-206ENST00000536398 NBR2O15453 112 aa11.19□□□□□ -0.62
UBE3B-206ENST00000536398 RPLP1P05386 114 aaKnown RBP11.19□□□□□ -0.62
UBE3B-206ENST00000536398 OR8U9P0C7N5 309 aa11.19□□□□□ -0.62
UBE3B-206ENST00000536398 IGLL1P15814 213 aa11.19□□□□□ -0.62
UBE3B-206ENST00000536398 TALDO1P37837 337 aa11.19□□□□□ -0.62
UBE3B-206ENST00000536398 SLC35B1P78383 322 aa11.19□□□□□ -0.62
UBE3B-206ENST00000536398 CFHR3Q02985 330 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms