RNA–Protein interactions for RNA: ENST00000535997.6

CHMP1A-202, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2 BASIC

Gene CHMP1A, Length 2,295 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-202ENST00000535997 TMEM41BQ5BJD5 291 aa13.48□□□□□ -0.25
CHMP1A-202ENST00000535997 ATP1A1-AS1Q5TC04 95 aa13.48□□□□□ -0.25
CHMP1A-202ENST00000535997 LCN15Q6UWW0 184 aa13.48□□□□□ -0.25
CHMP1A-202ENST00000535997 TMEM14EPQ6UXP3 125 aa13.48□□□□□ -0.25
CHMP1A-202ENST00000535997 Q8WTZ3 238 aa13.48□□□□□ -0.25
CHMP1A-202ENST00000535997 OBP2BQ9NPH6 170 aa13.48□□□□□ -0.25
CHMP1A-202ENST00000535997 HSPB7Q9UBY9 170 aa13.48□□□□□ -0.25
CHMP1A-202ENST00000535997 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP13.48□□□□□ -0.25
CHMP1A-202ENST00000535997 IGHV3-64DA0A0J9YX35 117 aa13.48□□□□□ -0.25
CHMP1A-202ENST00000535997 ZFP92A6NM28 416 aa13.48□□□□□ -0.25
CHMP1A-202ENST00000535997 C12orf77C9JDV5 145 aa13.48□□□□□ -0.25
CHMP1A-202ENST00000535997 IL2RGP31785 369 aa13.48□□□□□ -0.25
CHMP1A-202ENST00000535997 FAM90A2PQ658T7 463 aa13.48□□□□□ -0.25
CHMP1A-202ENST00000535997 SLC16A13Q7RTY0 426 aa13.48□□□□□ -0.25
CHMP1A-202ENST00000535997 MRGPRGQ86SM5 289 aa13.48□□□□□ -0.25
CHMP1A-202ENST00000535997 TAF15Q92804 592 aaKnown RBP eCLIP13.48□□□□□ -0.25
CHMP1A-202ENST00000535997 ZNF665Q9H7R5 613 aa13.48□□□□□ -0.25
CHMP1A-202ENST00000535997 CLCF1Q9UBD9 225 aa13.48□□□□□ -0.25
CHMP1A-202ENST00000535997 TINAGQ9UJW2 476 aa13.48□□□□□ -0.25
CHMP1A-202ENST00000535997 USF3Q68DE3 2245 aa13.48□□□□□ -0.25
CHMP1A-202ENST00000535997 GTF3C1Q12789 2109 aa13.47□□□□□ -0.25
CHMP1A-202ENST00000535997 OR3A1P47881 315 aa13.47□□□□□ -0.25
CHMP1A-202ENST00000535997 TMPRSS7Q7RTY8 843 aa13.47□□□□□ -0.25
CHMP1A-202ENST00000535997 CENPVQ7Z7K6 275 aaPredicted RBP13.47□□□□□ -0.25
CHMP1A-202ENST00000535997 C11orf53Q8IXP5 236 aa13.47□□□□□ -0.25
CHMP1A-202ENST00000535997 OR1L1Q8NH94 360 aa13.47□□□□□ -0.25
CHMP1A-202ENST00000535997 TMPRSS5Q9H3S3 457 aa13.47□□□□□ -0.25
CHMP1A-202ENST00000535997 TIMM9Q9Y5J7 89 aa13.47□□□□□ -0.25
CHMP1A-202ENST00000535997 PRRC2CQ9Y520 2896 aaKnown RBP13.47□□□□□ -0.25
CHMP1A-202ENST00000535997 M0R296 226 aa13.47□□□□□ -0.25
CHMP1A-202ENST00000535997 RAMP3O60896 148 aa13.47□□□□□ -0.25
CHMP1A-202ENST00000535997 IGHG3P01860 377 aa13.47□□□□□ -0.25
CHMP1A-202ENST00000535997 P0C879 139 aa13.47□□□□□ -0.25
CHMP1A-202ENST00000535997 TUBG1P23258 451 aa13.47□□□□□ -0.25
CHMP1A-202ENST00000535997 ERVFRD-1P60508 538 aa13.47□□□□□ -0.25
CHMP1A-202ENST00000535997 SLC38A11Q08AI6 406 aa13.47□□□□□ -0.25
CHMP1A-202ENST00000535997 KIAA0141Q14154 515 aaPredicted RBP13.47□□□□□ -0.25
CHMP1A-202ENST00000535997 ATP6V1FQ16864 119 aa13.47□□□□□ -0.25
CHMP1A-202ENST00000535997 GCNT2Q8N0V5 402 aa13.47□□□□□ -0.25
CHMP1A-202ENST00000535997 TCTEX1D1Q8N7M0 179 aa13.47□□□□□ -0.25
CHMP1A-202ENST00000535997 CA5BP1Q8WTZ4 195 aa13.47□□□□□ -0.25
CHMP1A-202ENST00000535997 OR2D2Q9H210 308 aa13.47□□□□□ -0.25
CHMP1A-202ENST00000535997 RBKSQ9H477 322 aa13.47□□□□□ -0.25
CHMP1A-202ENST00000535997 TUBG2Q9NRH3 451 aa13.47□□□□□ -0.25
CHMP1A-202ENST00000535997 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.47□□□□□ -0.25
CHMP1A-202ENST00000535997 VAX2Q9UIW0 290 aa13.47□□□□□ -0.25
CHMP1A-202ENST00000535997 DIDO1Q9BTC0 2240 aaKnown RBP13.47□□□□□ -0.25
CHMP1A-202ENST00000535997 KRASP01116 189 aa13.46□□□□□ -0.25
CHMP1A-202ENST00000535997 IGKV3-15P01624 115 aa13.46□□□□□ -0.25
CHMP1A-202ENST00000535997 CXCL1P09341 107 aa13.46□□□□□ -0.25
CHMP1A-202ENST00000535997 HOXA5P20719 270 aa13.46□□□□□ -0.25
CHMP1A-202ENST00000535997 MPV17P39210 176 aa13.46□□□□□ -0.25
CHMP1A-202ENST00000535997 CEBPDP49716 269 aaPredicted RBP13.46□□□□□ -0.25
CHMP1A-202ENST00000535997 CATR1Q13166 79 aa13.46□□□□□ -0.25
CHMP1A-202ENST00000535997 EIF4EBP1Q13541 118 aaPredicted RBP13.46□□□□□ -0.25
CHMP1A-202ENST00000535997 ZNF343Q6P1L6 599 aa13.46□□□□□ -0.25
CHMP1A-202ENST00000535997 PRR7Q8TB68 274 aa13.46□□□□□ -0.25
CHMP1A-202ENST00000535997 LRRC30A6NM36 301 aa13.46□□□□□ -0.26
CHMP1A-202ENST00000535997 MLNRO43193 412 aa13.46□□□□□ -0.26
CHMP1A-202ENST00000535997 CLDN1O95832 211 aa13.46□□□□□ -0.26
CHMP1A-202ENST00000535997 AESQ08117 197 aa13.46□□□□□ -0.26
CHMP1A-202ENST00000535997 GUSBP1Q15486 140 aa13.46□□□□□ -0.26
CHMP1A-202ENST00000535997 NINJ1Q92982 152 aa13.46□□□□□ -0.26
CHMP1A-202ENST00000535997 CXXC4Q9H2H0 198 aa13.46□□□□□ -0.26
CHMP1A-202ENST00000535997 NIT2Q9NQR4 276 aa13.46□□□□□ -0.26
CHMP1A-202ENST00000535997 URGCP-MRPS24S4R325 110 aa13.46□□□□□ -0.26
CHMP1A-202ENST00000535997 CLN5O75503 358 aa13.45□□□□□ -0.26
CHMP1A-202ENST00000535997 IFNA1P01562 189 aa13.45□□□□□ -0.26
CHMP1A-202ENST00000535997 HBZP02008 142 aa13.45□□□□□ -0.26
CHMP1A-202ENST00000535997 FGF8P55075 233 aaPredicted RBP13.45□□□□□ -0.26
CHMP1A-202ENST00000535997 RPL30P62888 115 aaKnown RBP13.45□□□□□ -0.26
CHMP1A-202ENST00000535997 SSX7Q7RTT5 188 aa13.45□□□□□ -0.26
CHMP1A-202ENST00000535997 OR52L2PQ8NGH6 319 aa13.45□□□□□ -0.26
CHMP1A-202ENST00000535997 TRIB1Q96RU8 372 aa13.45□□□□□ -0.26
CHMP1A-202ENST00000535997 SLC39A9Q9NUM3 307 aa13.45□□□□□ -0.26
CHMP1A-202ENST00000535997 MAP1LC3B2A6NCE7 125 aa13.44□□□□□ -0.26
CHMP1A-202ENST00000535997 ZNF891A8MT65 544 aaPredicted RBP13.44□□□□□ -0.26
CHMP1A-202ENST00000535997 IFNL4K9M1U5 179 aa13.44□□□□□ -0.26
CHMP1A-202ENST00000535997 HOXC12P31275 282 aa13.44□□□□□ -0.26
CHMP1A-202ENST00000535997 G6PCP35575 357 aa13.44□□□□□ -0.26
CHMP1A-202ENST00000535997 PMP22Q01453 160 aa13.44□□□□□ -0.26
CHMP1A-202ENST00000535997 ZNF674Q2M3X9 581 aa13.44□□□□□ -0.26
CHMP1A-202ENST00000535997 OR8G2PQ6IF36 304 aa13.44□□□□□ -0.26
CHMP1A-202ENST00000535997 ACP7Q6ZNF0 438 aa13.44□□□□□ -0.26
CHMP1A-202ENST00000535997 ZNF826PQ6ZT77 177 aa13.44□□□□□ -0.26
CHMP1A-202ENST00000535997 OR13D1Q8NGV5 346 aa13.44□□□□□ -0.26
CHMP1A-202ENST00000535997 MAP1LC3BQ9GZQ8 125 aa13.44□□□□□ -0.26
CHMP1A-202ENST00000535997 SDF2L1Q9HCN8 221 aa13.44□□□□□ -0.26
CHMP1A-202ENST00000535997 WNT9BO14905 357 aa13.44□□□□□ -0.26
CHMP1A-202ENST00000535997 ATXN7O15265 892 aaPredicted RBP13.44□□□□□ -0.26
CHMP1A-202ENST00000535997 FABP1P07148 127 aa13.44□□□□□ -0.26
CHMP1A-202ENST00000535997 CDX1P47902 265 aaPredicted RBP13.44□□□□□ -0.26
CHMP1A-202ENST00000535997 CXorf67Q86X51 503 aaPredicted RBP13.44□□□□□ -0.26
CHMP1A-202ENST00000535997 RPP25LQ8N5L8 163 aaKnown RBP13.44□□□□□ -0.26
CHMP1A-202ENST00000535997 ZNF610Q8N9Z0 462 aa13.44□□□□□ -0.26
CHMP1A-202ENST00000535997 C1orf162Q8NEQ5 155 aaPredicted RBP13.44□□□□□ -0.26
CHMP1A-202ENST00000535997 LURAP1Q96LR2 239 aa13.44□□□□□ -0.26
CHMP1A-202ENST00000535997 GSN-AS1Q9NRJ2 163 aa13.44□□□□□ -0.26
CHMP1A-202ENST00000535997 LAMP3Q9UQV4 416 aa13.44□□□□□ -0.26
CHMP1A-202ENST00000535997 TGIF2-C20orf24A0A0A6YYL0 155 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 85.5 ms