RNA–Protein interactions for RNA: ENST00000533946.5

SSBP3-215, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 431 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-215ENST00000533946 ISYNA1Q9NPH2 558 aa7.53□□□□□ -1.2
SSBP3-215ENST00000533946 PCDHB16Q9NRJ7 776 aa7.53□□□□□ -1.2
SSBP3-215ENST00000533946 PLEKHJ1Q9NW61 149 aa7.53□□□□□ -1.2
SSBP3-215ENST00000533946 IGHV7-81A0A0B4J1V7 117 aa7.52□□□□□ -1.21
SSBP3-215ENST00000533946 ATP6V0E1O15342 81 aa7.52□□□□□ -1.21
SSBP3-215ENST00000533946 GSTT2P0CG29 244 aa7.52□□□□□ -1.21
SSBP3-215ENST00000533946 GSTT2BP0CG30 244 aa7.52□□□□□ -1.21
SSBP3-215ENST00000533946 UBBP0CG47 229 aa7.52□□□□□ -1.21
SSBP3-215ENST00000533946 CEACAM6P40199 344 aa7.52□□□□□ -1.21
SSBP3-215ENST00000533946 THBS3P49746 956 aa7.52□□□□□ -1.21
SSBP3-215ENST00000533946 SSBP2P81877 361 aaPredicted RBP7.52□□□□□ -1.21
SSBP3-215ENST00000533946 CD200R1LQ6Q8B3 271 aa7.52□□□□□ -1.21
SSBP3-215ENST00000533946 ZNF367Q7RTV3 350 aa7.52□□□□□ -1.21
SSBP3-215ENST00000533946 ZNF383Q8NA42 475 aa7.52□□□□□ -1.21
SSBP3-215ENST00000533946 KLHL30-AS1Q8NEE0 82 aa7.52□□□□□ -1.21
SSBP3-215ENST00000533946 KCTD7Q96MP8 289 aa7.52□□□□□ -1.21
SSBP3-215ENST00000533946 CLCC1Q96S66 551 aa7.52□□□□□ -1.21
SSBP3-215ENST00000533946 P2RX4Q99571 388 aa7.52□□□□□ -1.21
SSBP3-215ENST00000533946 FAM103A1Q9BTL3 118 aaKnown RBP7.52□□□□□ -1.21
SSBP3-215ENST00000533946 LIN7CQ9NUP9 197 aaKnown RBP7.52□□□□□ -1.21
SSBP3-215ENST00000533946 NDUFB11Q9NX14 153 aa7.52□□□□□ -1.21
SSBP3-215ENST00000533946 KCNIP1Q9NZI2 227 aa7.52□□□□□ -1.21
SSBP3-215ENST00000533946 GHRLQ9UBU3 117 aa7.52□□□□□ -1.21
SSBP3-215ENST00000533946 SLC23A1Q9UHI7 598 aa7.52□□□□□ -1.21
SSBP3-215ENST00000533946 JPT1Q9UK76 154 aa7.52□□□□□ -1.21
SSBP3-215ENST00000533946 RAB26Q9ULW5 256 aa7.52□□□□□ -1.21
SSBP3-215ENST00000533946 V9GY05 133 aa7.52□□□□□ -1.21
SSBP3-215ENST00000533946 J3QRK9 145 aa7.51□□□□□ -1.21
SSBP3-215ENST00000533946 M0QZK8 103 aa7.51□□□□□ -1.21
SSBP3-215ENST00000533946 RAB27BO00194 218 aa7.51□□□□□ -1.21
SSBP3-215ENST00000533946 DENRO43583 198 aaKnown RBP7.51□□□□□ -1.21
SSBP3-215ENST00000533946 CA11O75493 328 aa7.51□□□□□ -1.21
SSBP3-215ENST00000533946 PF4P02776 101 aa7.51□□□□□ -1.21
SSBP3-215ENST00000533946 IGKV1-16P04430 117 aa7.51□□□□□ -1.21
SSBP3-215ENST00000533946 PTHLHP12272 177 aa7.51□□□□□ -1.21
SSBP3-215ENST00000533946 PPIFP30405 207 aaKnown RBP7.51□□□□□ -1.21
SSBP3-215ENST00000533946 LUMP51884 338 aaPredicted RBP7.51□□□□□ -1.21
SSBP3-215ENST00000533946 ARHGDIBP52566 201 aa7.51□□□□□ -1.21
SSBP3-215ENST00000533946 HLA-DRB3P79483 266 aa7.51□□□□□ -1.21
SSBP3-215ENST00000533946 DEFA5Q01523 94 aa7.51□□□□□ -1.21
SSBP3-215ENST00000533946 PJVKQ0ZLH3 352 aa7.51□□□□□ -1.21
SSBP3-215ENST00000533946 MMDQ15546 238 aa7.51□□□□□ -1.21
SSBP3-215ENST00000533946 MRGPRG-AS1Q2M3A8 158 aa7.51□□□□□ -1.21
SSBP3-215ENST00000533946 DTX3Q8N9I9 347 aa7.51□□□□□ -1.21
SSBP3-215ENST00000533946 OR4X2Q8NGF9 303 aa7.51□□□□□ -1.21
SSBP3-215ENST00000533946 OR5H6Q8NGV6 325 aa7.51□□□□□ -1.21
SSBP3-215ENST00000533946 MRAPQ8TCY5 172 aa7.51□□□□□ -1.21
SSBP3-215ENST00000533946 GALMQ96C23 342 aa7.51□□□□□ -1.21
SSBP3-215ENST00000533946 RYR3Q15413 4870 aa7.51□□□□□ -1.21
SSBP3-215ENST00000533946 TNCP24821 2201 aa7.5□□□□□ -1.21
SSBP3-215ENST00000533946 TRBV6-6A0A0A6YYG2 114 aa7.5□□□□□ -1.21
SSBP3-215ENST00000533946 TRDV1A0A1B0GX56 115 aa7.5□□□□□ -1.21
SSBP3-215ENST00000533946 IFITM5A6NNB3 132 aa7.5□□□□□ -1.21
SSBP3-215ENST00000533946 NUDT19A8MXV4 375 aa7.5□□□□□ -1.21
SSBP3-215ENST00000533946 H0YJW9 148 aa7.5□□□□□ -1.21
SSBP3-215ENST00000533946 MFNGO00587 321 aa7.5□□□□□ -1.21
SSBP3-215ENST00000533946 FCER2P06734 321 aa7.5□□□□□ -1.21
SSBP3-215ENST00000533946 PSMB9P28065 219 aa7.5□□□□□ -1.21
SSBP3-215ENST00000533946 SOX6P35712 828 aa7.5□□□□□ -1.21
SSBP3-215ENST00000533946 GNB1P62873 340 aa7.5□□□□□ -1.21
SSBP3-215ENST00000533946 Q3ZCU0 254 aa7.5□□□□□ -1.21
SSBP3-215ENST00000533946 C19orf54Q5BKX5 351 aa7.5□□□□□ -1.21
SSBP3-215ENST00000533946 UBE2UQ5VVX9 321 aa7.5□□□□□ -1.21
SSBP3-215ENST00000533946 C11orf87Q6NUJ2 197 aa7.5□□□□□ -1.21
SSBP3-215ENST00000533946 OR2AK2Q8NG84 335 aa7.5□□□□□ -1.21
SSBP3-215ENST00000533946 CHPT1Q8WUD6 406 aa7.5□□□□□ -1.21
SSBP3-215ENST00000533946 GPHA2Q96T91 129 aa7.5□□□□□ -1.21
SSBP3-215ENST00000533946 RASL11BQ9BPW5 248 aa7.5□□□□□ -1.21
SSBP3-215ENST00000533946 CMSS1Q9BQ75 279 aaKnown RBP7.5□□□□□ -1.21
SSBP3-215ENST00000533946 PARP11Q9NR21 331 aa7.5□□□□□ -1.21
SSBP3-215ENST00000533946 NECAP2Q9NVZ3 263 aa7.5□□□□□ -1.21
SSBP3-215ENST00000533946 TXNL4BQ9NX01 149 aaKnown RBP7.5□□□□□ -1.21
SSBP3-215ENST00000533946 STEAP1Q9UHE8 339 aa7.5□□□□□ -1.21
SSBP3-215ENST00000533946 A3GALT2U3KPV4 340 aa7.5□□□□□ -1.21
SSBP3-215ENST00000533946 TENM3Q9P273 2699 aa7.5□□□□□ -1.21
SSBP3-215ENST00000533946 TRAV1-2A0A0B4J238 106 aa7.49□□□□□ -1.21
SSBP3-215ENST00000533946 SRRM4A7MD48 611 aaKnown RBP7.49□□□□□ -1.21
SSBP3-215ENST00000533946 CCL24O00175 119 aa7.49□□□□□ -1.21
SSBP3-215ENST00000533946 AP4M1O00189 453 aa7.49□□□□□ -1.21
SSBP3-215ENST00000533946 ARPC1BO15143 372 aaKnown RBP7.49□□□□□ -1.21
SSBP3-215ENST00000533946 BET1O15155 118 aa7.49□□□□□ -1.21
SSBP3-215ENST00000533946 NBR2O15453 112 aa7.49□□□□□ -1.21
SSBP3-215ENST00000533946 SSX5O60225 188 aa7.49□□□□□ -1.21
SSBP3-215ENST00000533946 RBMXL2O75526 392 aaKnown RBP7.49□□□□□ -1.21
SSBP3-215ENST00000533946 ARL6IP5O75915 188 aa7.49□□□□□ -1.21
SSBP3-215ENST00000533946 FCGR3AP08637 254 aa7.49□□□□□ -1.21
SSBP3-215ENST00000533946 GADD45AP24522 165 aa7.49□□□□□ -1.21
SSBP3-215ENST00000533946 IL3RAP26951 378 aa7.49□□□□□ -1.21
SSBP3-215ENST00000533946 PSMB8P28062 276 aa7.49□□□□□ -1.21
SSBP3-215ENST00000533946 RAB25P57735 213 aa7.49□□□□□ -1.21
SSBP3-215ENST00000533946 MXD1Q05195 221 aa7.49□□□□□ -1.21
SSBP3-215ENST00000533946 PNLIPRP3Q17RR3 467 aa7.49□□□□□ -1.21
SSBP3-215ENST00000533946 C5orf64Q2M2E5 130 aa7.49□□□□□ -1.21
SSBP3-215ENST00000533946 STEAP3Q658P3 488 aa7.49□□□□□ -1.21
SSBP3-215ENST00000533946 TRAT1Q6PIZ9 186 aa7.49□□□□□ -1.21
SSBP3-215ENST00000533946 ZNF695Q8IW36 515 aa7.49□□□□□ -1.21
SSBP3-215ENST00000533946 RNF152Q8N8N0 203 aa7.49□□□□□ -1.21
SSBP3-215ENST00000533946 NPBQ8NG41 125 aa7.49□□□□□ -1.21
SSBP3-215ENST00000533946 OR10R2Q8NGX6 335 aa7.49□□□□□ -1.21
SSBP3-215ENST00000533946 MYOZ3Q8TDC0 251 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms