RNA–Protein interactions for RNA: ENST00000528563.5

HIF3A-211, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 2

Gene HIF3A, Length 1,486 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-211ENST00000528563 SLC25A38Q96DW6 304 aa13.36□□□□□ -0.27
HIF3A-211ENST00000528563 RBMXL1Q96E39 390 aaKnown RBP13.36□□□□□ -0.27
HIF3A-211ENST00000528563 FUNDC2Q9BWH2 189 aa13.36□□□□□ -0.27
HIF3A-211ENST00000528563 PIPOXQ9P0Z9 390 aa13.36□□□□□ -0.27
HIF3A-211ENST00000528563 ZNF230Q9UIE0 474 aaPredicted RBP13.36□□□□□ -0.27
HIF3A-211ENST00000528563 RAB29O14966 203 aa13.36□□□□□ -0.27
HIF3A-211ENST00000528563 DIRAS3O95661 229 aa13.36□□□□□ -0.27
HIF3A-211ENST00000528563 GSTT2P0CG29 244 aa13.36□□□□□ -0.27
HIF3A-211ENST00000528563 GSTT2BP0CG30 244 aa13.36□□□□□ -0.27
HIF3A-211ENST00000528563 LSAMPQ13449 338 aa13.36□□□□□ -0.27
HIF3A-211ENST00000528563 KIR2DS1Q14954 304 aa13.36□□□□□ -0.27
HIF3A-211ENST00000528563 ZNF260Q3ZCT1 412 aa13.36□□□□□ -0.27
HIF3A-211ENST00000528563 IGSF11Q5DX21 431 aa13.36□□□□□ -0.27
HIF3A-211ENST00000528563 HACD4Q5VWC8 232 aa13.36□□□□□ -0.27
HIF3A-211ENST00000528563 TREML4Q6UXN2 200 aa13.36□□□□□ -0.27
HIF3A-211ENST00000528563 CROCCP3Q8IVE0 287 aa13.36□□□□□ -0.27
HIF3A-211ENST00000528563 EDARADDQ8WWZ3 215 aa13.36□□□□□ -0.27
HIF3A-211ENST00000528563 NABP2Q9BQ15 211 aa13.36□□□□□ -0.27
HIF3A-211ENST00000528563 MRPL20Q9BYC9 149 aaKnown RBP13.36□□□□□ -0.27
HIF3A-211ENST00000528563 PROP1O75360 226 aa13.35□□□□□ -0.27
HIF3A-211ENST00000528563 PEX14O75381 377 aa13.35□□□□□ -0.27
HIF3A-211ENST00000528563 GSTP1P09211 210 aaKnown RBP13.35□□□□□ -0.27
HIF3A-211ENST00000528563 TALDO1P37837 337 aa13.35□□□□□ -0.27
HIF3A-211ENST00000528563 SERPINB10P48595 397 aa13.35□□□□□ -0.27
HIF3A-211ENST00000528563 HIST2H2BDQ6DRA6 164 aa13.35□□□□□ -0.27
HIF3A-211ENST00000528563 FAM71F2Q6NXP2 309 aa13.35□□□□□ -0.27
HIF3A-211ENST00000528563 Q8N9W7 124 aa13.35□□□□□ -0.27
HIF3A-211ENST00000528563 OR8H1Q8NGG4 311 aa13.35□□□□□ -0.27
HIF3A-211ENST00000528563 MAFIPQ8WZ33 124 aa13.35□□□□□ -0.27
HIF3A-211ENST00000528563 ABHD14BQ96IU4 210 aa13.35□□□□□ -0.27
HIF3A-211ENST00000528563 RDH8Q9NYR8 311 aa13.35□□□□□ -0.27
HIF3A-211ENST00000528563 SPATA2Q9UM82 520 aa13.35□□□□□ -0.27
HIF3A-211ENST00000528563 NOTCH1P46531 2555 aa13.35□□□□□ -0.27
HIF3A-211ENST00000528563 IGKV1D-8A0A087WSZ0 117 aa13.34□□□□□ -0.27
HIF3A-211ENST00000528563 TRBV6-7A0A0A0MS04 114 aa13.34□□□□□ -0.27
HIF3A-211ENST00000528563 NCBP2LA6PVI3 153 aaKnown RBP13.34□□□□□ -0.27
HIF3A-211ENST00000528563 CD28P10747 220 aa13.34□□□□□ -0.27
HIF3A-211ENST00000528563 DTYMKP23919 212 aa13.34□□□□□ -0.27
HIF3A-211ENST00000528563 F2RL1P55085 397 aa13.34□□□□□ -0.27
HIF3A-211ENST00000528563 PITPNAQ00169 270 aa13.34□□□□□ -0.27
HIF3A-211ENST00000528563 RPL39P5Q59GN2 51 aa13.34□□□□□ -0.27
HIF3A-211ENST00000528563 C9orf152Q5JTZ5 239 aa13.34□□□□□ -0.27
HIF3A-211ENST00000528563 CENPVQ7Z7K6 275 aaPredicted RBP13.34□□□□□ -0.27
HIF3A-211ENST00000528563 OR5AU1Q8NGC0 362 aa13.34□□□□□ -0.27
HIF3A-211ENST00000528563 S1PR3Q99500 378 aa13.34□□□□□ -0.27
HIF3A-211ENST00000528563 CABLES2Q9BTV7 478 aa13.34□□□□□ -0.27
HIF3A-211ENST00000528563 DCSTAMPQ9H295 470 aa13.34□□□□□ -0.27
HIF3A-211ENST00000528563 RNF150Q9ULK6 438 aa13.34□□□□□ -0.27
HIF3A-211ENST00000528563 TMEM235A6NFC5 223 aa13.33□□□□□ -0.28
HIF3A-211ENST00000528563 FBXO24O75426 580 aa13.33□□□□□ -0.28
HIF3A-211ENST00000528563 IGHG2P01859 326 aa13.33□□□□□ -0.28
HIF3A-211ENST00000528563 CT45A6P0DMU7 189 aa13.33□□□□□ -0.28
HIF3A-211ENST00000528563 CT45A5P0DMU8 189 aa13.33□□□□□ -0.28
HIF3A-211ENST00000528563 CT45A7P0DMV0 189 aa13.33□□□□□ -0.28
HIF3A-211ENST00000528563 PNLIPRP3Q17RR3 467 aa13.33□□□□□ -0.28
HIF3A-211ENST00000528563 OR10J5Q8NHC4 309 aa13.33□□□□□ -0.28
HIF3A-211ENST00000528563 RITA1Q96K30 269 aa13.33□□□□□ -0.28
HIF3A-211ENST00000528563 LIN7CQ9NUP9 197 aaKnown RBP13.33□□□□□ -0.28
HIF3A-211ENST00000528563 TET2Q6N021 2002 aaPredicted RBP13.33□□□□□ -0.28
HIF3A-211ENST00000528563 TRAV18A0A075B6X5 111 aa13.32□□□□□ -0.28
HIF3A-211ENST00000528563 A0A0A6YYH2 397 aa13.32□□□□□ -0.28
HIF3A-211ENST00000528563 A6NJ64 397 aa13.32□□□□□ -0.28
HIF3A-211ENST00000528563 LINC01548A6NM66 108 aa13.32□□□□□ -0.28
HIF3A-211ENST00000528563 BET1O15155 118 aa13.32□□□□□ -0.28
HIF3A-211ENST00000528563 SSX5O60225 188 aa13.32□□□□□ -0.28
HIF3A-211ENST00000528563 NCS1P62166 190 aa13.32□□□□□ -0.28
HIF3A-211ENST00000528563 CD83Q01151 205 aa13.32□□□□□ -0.28
HIF3A-211ENST00000528563 C2orf68Q2NKX9 166 aa13.32□□□□□ -0.28
HIF3A-211ENST00000528563 FAM71E2Q8N5Q1 922 aa13.32□□□□□ -0.28
HIF3A-211ENST00000528563 NUDCD2Q8WVJ2 157 aa13.32□□□□□ -0.28
HIF3A-211ENST00000528563 SLC25A46Q96AG3 418 aa13.32□□□□□ -0.28
HIF3A-211ENST00000528563 ST6GALNAC5Q9BVH7 336 aa13.32□□□□□ -0.28
HIF3A-211ENST00000528563 ABCG5Q9H222 651 aa13.32□□□□□ -0.28
HIF3A-211ENST00000528563 ADARB2-AS1A8MUL3 147 aa13.31□□□□□ -0.28
HIF3A-211ENST00000528563 TSPAN15O95858 294 aa13.31□□□□□ -0.28
HIF3A-211ENST00000528563 VBP1P61758 197 aa13.31□□□□□ -0.28
HIF3A-211ENST00000528563 TCTEX1D4Q5JR98 221 aa13.31□□□□□ -0.28
HIF3A-211ENST00000528563 ANKRD13BQ86YJ7 626 aa13.31□□□□□ -0.28
HIF3A-211ENST00000528563 OR5AN1Q8NGI8 311 aa13.31□□□□□ -0.28
HIF3A-211ENST00000528563 PHF21AQ96BD5 680 aa13.31□□□□□ -0.28
HIF3A-211ENST00000528563 CITED2Q99967 270 aaPredicted RBP13.31□□□□□ -0.28
HIF3A-211ENST00000528563 MMP27Q9H306 513 aa13.31□□□□□ -0.28
HIF3A-211ENST00000528563 DIABLOQ9NR28 239 aa13.31□□□□□ -0.28
HIF3A-211ENST00000528563 ZNF221Q9UK13 617 aa13.31□□□□□ -0.28
HIF3A-211ENST00000528563 GAB2Q9UQC2 676 aa13.31□□□□□ -0.28
HIF3A-211ENST00000528563 TFAP2AP05549 437 aa13.3□□□□□ -0.28
HIF3A-211ENST00000528563 CSF1P09603 554 aa13.3□□□□□ -0.28
HIF3A-211ENST00000528563 MC5RP33032 325 aa13.3□□□□□ -0.28
HIF3A-211ENST00000528563 ACTBP60709 375 aa13.3□□□□□ -0.28
HIF3A-211ENST00000528563 C10orf99Q6UWK7 81 aa13.3□□□□□ -0.28
HIF3A-211ENST00000528563 RASL11BQ9BPW5 248 aa13.3□□□□□ -0.28
HIF3A-211ENST00000528563 MRPS26Q9BYN8 205 aaKnown RBP13.3□□□□□ -0.28
HIF3A-211ENST00000528563 MEGF8Q7Z7M0 2845 aa13.3□□□□□ -0.28
HIF3A-211ENST00000528563 OR8U9P0C7N5 309 aa13.29□□□□□ -0.28
HIF3A-211ENST00000528563 GPR12P47775 334 aa13.29□□□□□ -0.28
HIF3A-211ENST00000528563 ALDH3B2P48448 385 aa13.29□□□□□ -0.28
HIF3A-211ENST00000528563 GNG2P59768 71 aa13.29□□□□□ -0.28
HIF3A-211ENST00000528563 CTF1Q16619 201 aa13.29□□□□□ -0.28
HIF3A-211ENST00000528563 SLC35E3Q7Z769 313 aa13.29□□□□□ -0.28
HIF3A-211ENST00000528563 NDUFA11Q86Y39 141 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms