RNA–Protein interactions for RNA: ENST00000518538.5

VEGFA-217, Transcript of vascular endothelial growth factor A, humanhuman

TSL 2

Gene VEGFA, Length 535 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-217ENST00000518538 EBI3Q14213 229 aa17.57■□□□□ 0.4
VEGFA-217ENST00000518538 HES1Q14469 280 aa17.57■□□□□ 0.4
VEGFA-217ENST00000518538 IGSF11Q5DX21 431 aa17.57■□□□□ 0.4
VEGFA-217ENST00000518538 FAM71F2Q6NXP2 309 aa17.57■□□□□ 0.4
VEGFA-217ENST00000518538 SHISA2Q6UWI4 295 aa17.57■□□□□ 0.4
VEGFA-217ENST00000518538 RAB2BQ8WUD1 216 aa17.57■□□□□ 0.4
VEGFA-217ENST00000518538 AGMATQ9BSE5 352 aa17.57■□□□□ 0.4
VEGFA-217ENST00000518538 ST6GALNAC5Q9BVH7 336 aa17.57■□□□□ 0.4
VEGFA-217ENST00000518538 PRSS22Q9GZN4 317 aa17.57■□□□□ 0.4
VEGFA-217ENST00000518538 C11orf54Q9H0W9 315 aaPredicted RBP17.57■□□□□ 0.4
VEGFA-217ENST00000518538 GHITMQ9H3K2 345 aa17.57■□□□□ 0.4
VEGFA-217ENST00000518538 AUNIPQ9H7T9 357 aa17.57■□□□□ 0.4
VEGFA-217ENST00000518538 COMMD3Q9UBI1 195 aa17.57■□□□□ 0.4
VEGFA-217ENST00000518538 SCOCQ9UIL1 159 aa17.57■□□□□ 0.4
VEGFA-217ENST00000518538 TRBV6-7A0A0A0MS04 114 aa17.56■□□□□ 0.4
VEGFA-217ENST00000518538 M0QZK8 103 aa17.56■□□□□ 0.4
VEGFA-217ENST00000518538 RAB29O14966 203 aa17.56■□□□□ 0.4
VEGFA-217ENST00000518538 BET1O15155 118 aa17.56■□□□□ 0.4
VEGFA-217ENST00000518538 TMBIM6P55061 237 aa17.56■□□□□ 0.4
VEGFA-217ENST00000518538 C11orf88Q6PI97 169 aa17.56■□□□□ 0.4
VEGFA-217ENST00000518538 OR10J5Q8NHC4 309 aa17.56■□□□□ 0.4
VEGFA-217ENST00000518538 AP3S1Q92572 193 aa17.56■□□□□ 0.4
VEGFA-217ENST00000518538 CMTM3Q96MX0 182 aa17.56■□□□□ 0.4
VEGFA-217ENST00000518538 BCL7BQ9BQE9 202 aa17.56■□□□□ 0.4
VEGFA-217ENST00000518538 RDH8Q9NYR8 311 aa17.56■□□□□ 0.4
VEGFA-217ENST00000518538 SIGLEC9Q9Y336 463 aa17.56■□□□□ 0.4
VEGFA-217ENST00000518538 MOB4Q9Y3A3 225 aa17.56■□□□□ 0.4
VEGFA-217ENST00000518538 IGKV1D-8A0A087WSZ0 117 aa17.55■□□□□ 0.4
VEGFA-217ENST00000518538 OR3A3P47888 321 aa17.55■□□□□ 0.4
VEGFA-217ENST00000518538 BLCAPP62952 87 aa17.55■□□□□ 0.4
VEGFA-217ENST00000518538 OR2T10Q8NGZ9 312 aa17.55■□□□□ 0.4
VEGFA-217ENST00000518538 HAX1O00165 279 aa17.54■□□□□ 0.4
VEGFA-217ENST00000518538 ZNF182P17025 639 aaPredicted RBP17.54■□□□□ 0.4
VEGFA-217ENST00000518538 LSAMPQ13449 338 aa17.54■□□□□ 0.4
VEGFA-217ENST00000518538 HNF4GQ14541 408 aa17.54■□□□□ 0.4
VEGFA-217ENST00000518538 TMEM69Q5SWH9 247 aa17.54■□□□□ 0.4
VEGFA-217ENST00000518538 MZT2AQ6P582 158 aa17.54■□□□□ 0.4
VEGFA-217ENST00000518538 ABHD14BQ96IU4 210 aa17.54■□□□□ 0.4
VEGFA-217ENST00000518538 EAF1Q96JC9 268 aaPredicted RBP17.54■□□□□ 0.4
VEGFA-217ENST00000518538 S1PR3Q99500 378 aa17.54■□□□□ 0.4
VEGFA-217ENST00000518538 NABP2Q9BQ15 211 aa17.54■□□□□ 0.4
VEGFA-217ENST00000518538 ZNF251Q9BRH9 671 aa17.54■□□□□ 0.4
VEGFA-217ENST00000518538 GINS4Q9BRT9 223 aa17.54■□□□□ 0.4
VEGFA-217ENST00000518538 MRPL20Q9BYC9 149 aaKnown RBP17.54■□□□□ 0.4
VEGFA-217ENST00000518538 ZNF736B4DX44 427 aaPredicted RBP17.53■□□□□ 0.4
VEGFA-217ENST00000518538 MOSP00540 346 aa17.53■□□□□ 0.4
VEGFA-217ENST00000518538 APOA1P02647 267 aa17.53■□□□□ 0.4
VEGFA-217ENST00000518538 AMY1AP04745 511 aa17.53■□□□□ 0.4
VEGFA-217ENST00000518538 AMY2AP04746 511 aa17.53■□□□□ 0.4
VEGFA-217ENST00000518538 EIF4EP06730 217 aaKnown RBP17.53■□□□□ 0.4
VEGFA-217ENST00000518538 CTXN2P0C2S0 81 aa17.53■□□□□ 0.4
VEGFA-217ENST00000518538 SPCS2Q15005 226 aa17.53■□□□□ 0.4
VEGFA-217ENST00000518538 Q6ZS46 218 aa17.53■□□□□ 0.4
VEGFA-217ENST00000518538 Q8N6K4 173 aa17.53■□□□□ 0.4
VEGFA-217ENST00000518538 FGF16O43320 207 aa17.52■□□□□ 0.4
VEGFA-217ENST00000518538 NOL3O60936 208 aaKnown RBP17.52■□□□□ 0.4
VEGFA-217ENST00000518538 TAS2R20P59543 309 aa17.52■□□□□ 0.4
VEGFA-217ENST00000518538 ABCA11PQ4W5N1 156 aa17.52■□□□□ 0.4
VEGFA-217ENST00000518538 RPL39P5Q59GN2 51 aa17.52■□□□□ 0.4
VEGFA-217ENST00000518538 CNIH2Q6PI25 160 aa17.52■□□□□ 0.4
VEGFA-217ENST00000518538 H1FOOQ8IZA3 346 aaPredicted RBP17.52■□□□□ 0.4
VEGFA-217ENST00000518538 SERTAD4Q9NUC0 356 aa17.52■□□□□ 0.4
VEGFA-217ENST00000518538 ANXA10Q9UJ72 324 aa17.52■□□□□ 0.4
VEGFA-217ENST00000518538 ZNF221Q9UK13 617 aa17.52■□□□□ 0.4
VEGFA-217ENST00000518538 TENM1Q9UKZ4 2725 aa17.52■□□□□ 0.39
VEGFA-217ENST00000518538 HPGDSO60760 199 aa17.51■□□□□ 0.39
VEGFA-217ENST00000518538 PTHLHP12272 177 aa17.51■□□□□ 0.39
VEGFA-217ENST00000518538 SOX6P35712 828 aa17.51■□□□□ 0.39
VEGFA-217ENST00000518538 CBX5P45973 191 aa17.51■□□□□ 0.39
VEGFA-217ENST00000518538 KRTAP10-3P60369 221 aa17.51■□□□□ 0.39
VEGFA-217ENST00000518538 HOGA1Q86XE5 327 aa17.51■□□□□ 0.39
VEGFA-217ENST00000518538 C5orf56Q8N8D9 126 aa17.51■□□□□ 0.39
VEGFA-217ENST00000518538 CITED1Q99966 193 aa17.51■□□□□ 0.39
VEGFA-217ENST00000518538 RNF150Q9ULK6 438 aa17.51■□□□□ 0.39
VEGFA-217ENST00000518538 SMIM31A0A1B0GVY4 71 aa17.5■□□□□ 0.39
VEGFA-217ENST00000518538 GPR12P47775 334 aa17.5■□□□□ 0.39
VEGFA-217ENST00000518538 SRSF4Q08170 494 aaKnown RBP17.5■□□□□ 0.39
VEGFA-217ENST00000518538 ARSJQ5FYB0 599 aaPredicted RBP17.5■□□□□ 0.39
VEGFA-217ENST00000518538 GVQW1Q8N7I0 195 aa17.5■□□□□ 0.39
VEGFA-217ENST00000518538 ZNF436-AS1Q8NC38 126 aaPredicted RBP17.5■□□□□ 0.39
VEGFA-217ENST00000518538 BEST4Q8NFU0 473 aa17.5■□□□□ 0.39
VEGFA-217ENST00000518538 OR8H1Q8NGG4 311 aa17.5■□□□□ 0.39
VEGFA-217ENST00000518538 OR8U9P0C7N5 309 aa17.49■□□□□ 0.39
VEGFA-217ENST00000518538 CT45A6P0DMU7 189 aa17.49■□□□□ 0.39
VEGFA-217ENST00000518538 CT45A5P0DMU8 189 aa17.49■□□□□ 0.39
VEGFA-217ENST00000518538 CT45A7P0DMV0 189 aa17.49■□□□□ 0.39
VEGFA-217ENST00000518538 ELK1P19419 428 aa17.49■□□□□ 0.39
VEGFA-217ENST00000518538 VDAC2P45880 294 aaPredicted RBP17.49■□□□□ 0.39
VEGFA-217ENST00000518538 KLHDC1Q8N7A1 406 aa17.49■□□□□ 0.39
VEGFA-217ENST00000518538 OR8U1Q8NH10 309 aa17.49■□□□□ 0.39
VEGFA-217ENST00000518538 ISOC1Q96CN7 298 aa17.49■□□□□ 0.39
VEGFA-217ENST00000518538 OR2D2Q9H210 308 aa17.49■□□□□ 0.39
VEGFA-217ENST00000518538 GAB2Q9UQC2 676 aa17.49■□□□□ 0.39
VEGFA-217ENST00000518538 OR5H14A6NHG9 310 aa17.48■□□□□ 0.39
VEGFA-217ENST00000518538 NCBP2LA6PVI3 153 aaKnown RBP17.48■□□□□ 0.39
VEGFA-217ENST00000518538 PROP1O75360 226 aa17.48■□□□□ 0.39
VEGFA-217ENST00000518538 RBM7Q9Y580 266 aaKnown RBP17.48■□□□□ 0.39
VEGFA-217ENST00000518538 SH2D7A6NKC9 451 aaPredicted RBP17.47■□□□□ 0.39
VEGFA-217ENST00000518538 H3BMQ9 156 aa17.47■□□□□ 0.39
VEGFA-217ENST00000518538 HLA-DQB1P01920 261 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms