RNA–Protein interactions for RNA: ENST00000517494.1

CSGALNACT1-204, Transcript of chondroitin sulfate N-acetylgalactosaminyltransferase 1, humanhuman

TSL 3

Gene CSGALNACT1, Length 766 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT1-204ENST00000517494 MBNL3Q9NUK0 354 aaKnown RBP11.7□□□□□ -0.54
CSGALNACT1-204ENST00000517494 MRPS18AQ9NVS2 196 aaKnown RBP11.7□□□□□ -0.54
CSGALNACT1-204ENST00000517494 BABAM2Q9NXR7 383 aa11.7□□□□□ -0.54
CSGALNACT1-204ENST00000517494 ABRACLQ9P1F3 81 aa11.7□□□□□ -0.54
CSGALNACT1-204ENST00000517494 STEAP1Q9UHE8 339 aa11.7□□□□□ -0.54
CSGALNACT1-204ENST00000517494 GAB2Q9UQC2 676 aa11.7□□□□□ -0.54
CSGALNACT1-204ENST00000517494 TRBV5-5A0A0J9YX44 114 aa11.69□□□□□ -0.54
CSGALNACT1-204ENST00000517494 H3BNX3 289 aa11.69□□□□□ -0.54
CSGALNACT1-204ENST00000517494 OGG1O15527 345 aa11.69□□□□□ -0.54
CSGALNACT1-204ENST00000517494 PDCD6O75340 191 aa11.69□□□□□ -0.54
CSGALNACT1-204ENST00000517494 LALBAP00709 142 aa11.69□□□□□ -0.54
CSGALNACT1-204ENST00000517494 TRGV3P03979 118 aa11.69□□□□□ -0.54
CSGALNACT1-204ENST00000517494 CRIP2P52943 208 aaPredicted RBP11.69□□□□□ -0.54
CSGALNACT1-204ENST00000517494 HTD2P86397 168 aa11.69□□□□□ -0.54
CSGALNACT1-204ENST00000517494 SIGIRRQ6IA17 410 aa11.69□□□□□ -0.54
CSGALNACT1-204ENST00000517494 LFNGQ8NES3 379 aa11.69□□□□□ -0.54
CSGALNACT1-204ENST00000517494 SETD6Q8TBK2 473 aa11.69□□□□□ -0.54
CSGALNACT1-204ENST00000517494 Q96M66 194 aa11.69□□□□□ -0.54
CSGALNACT1-204ENST00000517494 C19orf73Q9NVV2 129 aa11.69□□□□□ -0.54
CSGALNACT1-204ENST00000517494 CNOT2Q9NZN8 540 aaKnown RBP11.69□□□□□ -0.54
CSGALNACT1-204ENST00000517494 FAM90A7PA6NKC0 464 aa11.68□□□□□ -0.54
CSGALNACT1-204ENST00000517494 FAM90A23PA8MXZ1 464 aa11.68□□□□□ -0.54
CSGALNACT1-204ENST00000517494 JTBO76095 146 aa11.68□□□□□ -0.54
CSGALNACT1-204ENST00000517494 IGLV1-51P01701 117 aa11.68□□□□□ -0.54
CSGALNACT1-204ENST00000517494 IFNA6P05013 189 aa11.68□□□□□ -0.54
CSGALNACT1-204ENST00000517494 EGR2P11161 476 aaPredicted RBP11.68□□□□□ -0.54
CSGALNACT1-204ENST00000517494 FSTP19883 344 aa11.68□□□□□ -0.54
CSGALNACT1-204ENST00000517494 DCKP27707 260 aa11.68□□□□□ -0.54
CSGALNACT1-204ENST00000517494 CAPGP40121 348 aa11.68□□□□□ -0.54
CSGALNACT1-204ENST00000517494 YIF1BQ5BJH7 314 aa11.68□□□□□ -0.54
CSGALNACT1-204ENST00000517494 DMKNQ6E0U4 476 aaPredicted RBP11.68□□□□□ -0.54
CSGALNACT1-204ENST00000517494 ZNF554Q86TJ5 538 aa11.68□□□□□ -0.54
CSGALNACT1-204ENST00000517494 GRPEL2Q8TAA5 225 aa11.68□□□□□ -0.54
CSGALNACT1-204ENST00000517494 C9orf16Q9BUW7 83 aa11.68□□□□□ -0.54
CSGALNACT1-204ENST00000517494 TMED9Q9BVK6 235 aa11.68□□□□□ -0.54
CSGALNACT1-204ENST00000517494 TUBA4BQ9H853 241 aa11.68□□□□□ -0.54
CSGALNACT1-204ENST00000517494 CHMP1AQ9HD42 196 aaPredicted RBP11.68□□□□□ -0.54
CSGALNACT1-204ENST00000517494 PIPOXQ9P0Z9 390 aa11.68□□□□□ -0.54
CSGALNACT1-204ENST00000517494 METTL1Q9UBP6 276 aaKnown RBP11.68□□□□□ -0.54
CSGALNACT1-204ENST00000517494 CLEC2DQ9UHP7 191 aa11.68□□□□□ -0.54
CSGALNACT1-204ENST00000517494 NUBP2Q9Y5Y2 271 aa11.68□□□□□ -0.54
CSGALNACT1-204ENST00000517494 C13orf42A0A1B0GVH6 325 aa11.67□□□□□ -0.54
CSGALNACT1-204ENST00000517494 ANKRD34BA5PLL1 514 aa11.67□□□□□ -0.54
CSGALNACT1-204ENST00000517494 OR5H14A6NHG9 310 aa11.67□□□□□ -0.54
CSGALNACT1-204ENST00000517494 RAB29O14966 203 aa11.67□□□□□ -0.54
CSGALNACT1-204ENST00000517494 GPX5O75715 221 aa11.67□□□□□ -0.54
CSGALNACT1-204ENST00000517494 CA2P00918 260 aa11.67□□□□□ -0.54
CSGALNACT1-204ENST00000517494 GLAP06280 429 aa11.67□□□□□ -0.54
CSGALNACT1-204ENST00000517494 CT45A6P0DMU7 189 aa11.67□□□□□ -0.54
CSGALNACT1-204ENST00000517494 CT45A5P0DMU8 189 aa11.67□□□□□ -0.54
CSGALNACT1-204ENST00000517494 CT45A7P0DMV0 189 aa11.67□□□□□ -0.54
CSGALNACT1-204ENST00000517494 VEGFCP49767 419 aa11.67□□□□□ -0.54
CSGALNACT1-204ENST00000517494 CD200R1LQ6Q8B3 271 aa11.67□□□□□ -0.54
CSGALNACT1-204ENST00000517494 ABHD14BQ96IU4 210 aa11.67□□□□□ -0.54
CSGALNACT1-204ENST00000517494 RHOVQ96L33 236 aa11.67□□□□□ -0.54
CSGALNACT1-204ENST00000517494 NEDD4LQ96PU5 975 aa11.67□□□□□ -0.54
CSGALNACT1-204ENST00000517494 SLC29A1Q99808 456 aa11.67□□□□□ -0.54
CSGALNACT1-204ENST00000517494 SLA2Q9H6Q3 261 aa11.67□□□□□ -0.54
CSGALNACT1-204ENST00000517494 EXOSC1Q9Y3B2 195 aaKnown RBP11.67□□□□□ -0.54
CSGALNACT1-204ENST00000517494 WASHC3Q9Y3C0 194 aa11.67□□□□□ -0.54
CSGALNACT1-204ENST00000517494 LYSTQ99698 3801 aa11.67□□□□□ -0.54
CSGALNACT1-204ENST00000517494 H0YJW9 148 aa11.66□□□□□ -0.54
CSGALNACT1-204ENST00000517494 WBP4O75554 376 aaKnown RBP11.66□□□□□ -0.54
CSGALNACT1-204ENST00000517494 TFAP2AP05549 437 aa11.66□□□□□ -0.54
CSGALNACT1-204ENST00000517494 SNRPBP14678 240 aaKnown RBP11.66□□□□□ -0.54
CSGALNACT1-204ENST00000517494 ZP3P21754 424 aa11.66□□□□□ -0.54
CSGALNACT1-204ENST00000517494 RPS11P62280 158 aaKnown RBP eCLIP11.66□□□□□ -0.54
CSGALNACT1-204ENST00000517494 HMGN3Q15651 99 aa11.66□□□□□ -0.54
CSGALNACT1-204ENST00000517494 HAGHQ16775 308 aa11.66□□□□□ -0.54
CSGALNACT1-204ENST00000517494 AKIRIN2Q53H80 203 aa11.66□□□□□ -0.54
CSGALNACT1-204ENST00000517494 FAM71F2Q6NXP2 309 aa11.66□□□□□ -0.54
CSGALNACT1-204ENST00000517494 ZFP1Q6P2D0 407 aa11.66□□□□□ -0.54
CSGALNACT1-204ENST00000517494 GTSCR1Q86UQ5 136 aa11.66□□□□□ -0.54
CSGALNACT1-204ENST00000517494 SULT4A1Q9BR01 284 aa11.66□□□□□ -0.54
CSGALNACT1-204ENST00000517494 PARP12Q9H0J9 701 aaKnown RBP11.66□□□□□ -0.54
CSGALNACT1-204ENST00000517494 RANGRFQ9HD47 186 aaPredicted RBP11.66□□□□□ -0.54
CSGALNACT1-204ENST00000517494 RETNQ9HD89 108 aa11.66□□□□□ -0.54
CSGALNACT1-204ENST00000517494 SLC23A1Q9UHI7 598 aa11.66□□□□□ -0.54
CSGALNACT1-204ENST00000517494 LRRC42Q9Y546 428 aa11.66□□□□□ -0.54
CSGALNACT1-204ENST00000517494 HYDINQ4G0P3 5121 aa11.66□□□□□ -0.54
CSGALNACT1-204ENST00000517494 TRBV5-7A0A0A0MS05 114 aa11.65□□□□□ -0.54
CSGALNACT1-204ENST00000517494 IRGMA1A4Y4 181 aa11.65□□□□□ -0.54
CSGALNACT1-204ENST00000517494 A8MZ25 164 aa11.65□□□□□ -0.54
CSGALNACT1-204ENST00000517494 ARPC1BO15143 372 aaKnown RBP11.65□□□□□ -0.54
CSGALNACT1-204ENST00000517494 CPEP16870 476 aa11.65□□□□□ -0.54
CSGALNACT1-204ENST00000517494 MC5RP33032 325 aa11.65□□□□□ -0.54
CSGALNACT1-204ENST00000517494 MED21Q13503 144 aa11.65□□□□□ -0.54
CSGALNACT1-204ENST00000517494 PSG5Q15238 335 aa11.65□□□□□ -0.54
CSGALNACT1-204ENST00000517494 C6orf141Q5SZD1 244 aa11.65□□□□□ -0.54
CSGALNACT1-204ENST00000517494 DRAXINQ8NBI3 349 aaPredicted RBP11.65□□□□□ -0.54
CSGALNACT1-204ENST00000517494 ZNF555Q8NEP9 628 aa11.65□□□□□ -0.54
CSGALNACT1-204ENST00000517494 PGLYRP3Q96LB9 341 aa11.65□□□□□ -0.54
CSGALNACT1-204ENST00000517494 FAAP24Q9BTP7 215 aa11.65□□□□□ -0.54
CSGALNACT1-204ENST00000517494 DIMT1Q9UNQ2 313 aaKnown RBP11.65□□□□□ -0.54
CSGALNACT1-204ENST00000517494 H0Y980 276 aa11.64□□□□□ -0.55
CSGALNACT1-204ENST00000517494 SLC22A1O15245 554 aa11.64□□□□□ -0.55
CSGALNACT1-204ENST00000517494 RBBP9O75884 186 aa11.64□□□□□ -0.55
CSGALNACT1-204ENST00000517494 SYNJ2BPP57105 145 aa11.64□□□□□ -0.55
CSGALNACT1-204ENST00000517494 DEFA5Q01523 94 aa11.64□□□□□ -0.55
CSGALNACT1-204ENST00000517494 FXYD3Q14802 87 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms