RNA–Protein interactions for RNA: ENST00000517393.1

POLB-202, Transcript of DNA polymerase beta, humanhuman

TSL 3

Gene POLB, Length 401 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLB-202ENST00000517393 DCXRQ7Z4W1 244 aa-0.32□□□□□ -2.46
POLB-202ENST00000517393 C15orf53Q8NAA6 179 aa-0.32□□□□□ -2.46
POLB-202ENST00000517393 ACBD4Q8NC06 268 aa-0.32□□□□□ -2.46
POLB-202ENST00000517393 FNDC9Q8TBE3 224 aa-0.32□□□□□ -2.46
POLB-202ENST00000517393 DOK4Q8TEW6 326 aa-0.32□□□□□ -2.46
POLB-202ENST00000517393 BIRC8Q96P09 236 aa-0.32□□□□□ -2.46
POLB-202ENST00000517393 HBEGFQ99075 208 aa-0.32□□□□□ -2.46
POLB-202ENST00000517393 VAT1Q99536 393 aa-0.32□□□□□ -2.46
POLB-202ENST00000517393 SUCNR1Q9BXA5 334 aa-0.32□□□□□ -2.46
POLB-202ENST00000517393 AUNIPQ9H7T9 357 aa-0.32□□□□□ -2.46
POLB-202ENST00000517393 MRPL22Q9NWU5 206 aaKnown RBP-0.32□□□□□ -2.46
POLB-202ENST00000517393 SNX12Q9UMY4 172 aa-0.32□□□□□ -2.46
POLB-202ENST00000517393 UTP20O75691 2785 aaKnown RBP-0.32□□□□□ -2.46
POLB-202ENST00000517393 NBASA2RRP1 2371 aa-0.32□□□□□ -2.46
POLB-202ENST00000517393 ARFGEF3Q5TH69 2177 aa-0.32□□□□□ -2.46
POLB-202ENST00000517393 AKAP6Q13023 2319 aa-0.32□□□□□ -2.46
POLB-202ENST00000517393 KIAA2026Q5HYC2 2103 aa-0.32□□□□□ -2.46
POLB-202ENST00000517393 ABCA1O95477 2261 aa-0.33□□□□□ -2.46
POLB-202ENST00000517393 CENPEQ02224 2701 aa-0.33□□□□□ -2.46
POLB-202ENST00000517393 DMXL2Q8TDJ6 3036 aa-0.33□□□□□ -2.46
POLB-202ENST00000517393 ZFC3H1O60293 1989 aaKnown RBP-0.33□□□□□ -2.46
POLB-202ENST00000517393 BOLA2-SMG1P6H3BVE0 249 aa-0.33□□□□□ -2.46
POLB-202ENST00000517393 FGF4P08620 206 aa-0.33□□□□□ -2.46
POLB-202ENST00000517393 IVDP26440 423 aa-0.33□□□□□ -2.46
POLB-202ENST00000517393 ARR3P36575 388 aa-0.33□□□□□ -2.46
POLB-202ENST00000517393 CSKP41240 450 aa-0.33□□□□□ -2.46
POLB-202ENST00000517393 XCL1P47992 114 aa-0.33□□□□□ -2.46
POLB-202ENST00000517393 REG1BP48304 166 aa-0.33□□□□□ -2.46
POLB-202ENST00000517393 MP68P56378 58 aa-0.33□□□□□ -2.46
POLB-202ENST00000517393 RAB2AP61019 212 aa-0.33□□□□□ -2.46
POLB-202ENST00000517393 DEFA5Q01523 94 aa-0.33□□□□□ -2.46
POLB-202ENST00000517393 XRCC4Q13426 336 aa-0.33□□□□□ -2.46
POLB-202ENST00000517393 RCN1Q15293 331 aa-0.33□□□□□ -2.46
POLB-202ENST00000517393 Q1T7F1 81 aa-0.33□□□□□ -2.46
POLB-202ENST00000517393 MAJINQ3KP22 176 aa-0.33□□□□□ -2.46
POLB-202ENST00000517393 KRTAP6-2Q3LI66 62 aa-0.33□□□□□ -2.46
POLB-202ENST00000517393 ZBTB8OSQ8IWT0 167 aa-0.33□□□□□ -2.46
POLB-202ENST00000517393 DRAXINQ8NBI3 349 aaPredicted RBP-0.33□□□□□ -2.46
POLB-202ENST00000517393 SLC30A7Q8NEW0 376 aa-0.33□□□□□ -2.46
POLB-202ENST00000517393 SLC7A6Q92536 515 aa-0.33□□□□□ -2.46
POLB-202ENST00000517393 C11orf70Q9BRQ4 267 aa-0.33□□□□□ -2.46
POLB-202ENST00000517393 VCX3BQ9H321 246 aa-0.33□□□□□ -2.46
POLB-202ENST00000517393 C11orf49Q9H6J7 331 aa-0.33□□□□□ -2.46
POLB-202ENST00000517393 PLAC8Q9NZF1 115 aa-0.33□□□□□ -2.46
POLB-202ENST00000517393 TBL2Q9Y4P3 447 aaKnown RBP-0.33□□□□□ -2.46
POLB-202ENST00000517393 NCOA6Q14686 2063 aaPredicted RBP-0.33□□□□□ -2.46
POLB-202ENST00000517393 NEURL4Q96JN8 1562 aa-0.33□□□□□ -2.46
POLB-202ENST00000517393 MED13LQ71F56 2210 aa-0.33□□□□□ -2.46
POLB-202ENST00000517393 SMARCA4P51532 1647 aa-0.34□□□□□ -2.46
POLB-202ENST00000517393 ADAMTSL1Q8N6G6 1762 aa-0.34□□□□□ -2.46
POLB-202ENST00000517393 FAM183AA6NL82 134 aa-0.34□□□□□ -2.46
POLB-202ENST00000517393 B4DEV8 164 aa-0.34□□□□□ -2.46
POLB-202ENST00000517393 C9J4A7 227 aa-0.34□□□□□ -2.46
POLB-202ENST00000517393 FGF16O43320 207 aa-0.34□□□□□ -2.46
POLB-202ENST00000517393 SERPINA7P05543 415 aa-0.34□□□□□ -2.46
POLB-202ENST00000517393 NPPCP23582 126 aa-0.34□□□□□ -2.46
POLB-202ENST00000517393 PSMA1P25786 263 aaKnown RBP-0.34□□□□□ -2.46
POLB-202ENST00000517393 TSPOP30536 169 aa-0.34□□□□□ -2.46
POLB-202ENST00000517393 TSPEAR-AS2P59090 65 aa-0.34□□□□□ -2.46
POLB-202ENST00000517393 HBG1P69891 147 aa-0.34□□□□□ -2.46
POLB-202ENST00000517393 HBG2P69892 147 aa-0.34□□□□□ -2.46
POLB-202ENST00000517393 ACACAQ13085 2346 aa-0.34□□□□□ -2.46
POLB-202ENST00000517393 CIRBPQ14011 172 aaKnown RBP-0.34□□□□□ -2.46
POLB-202ENST00000517393 KLK9Q2XQG4 91 aa-0.34□□□□□ -2.46
POLB-202ENST00000517393 HNRNPA1L2Q32P51 320 aaKnown RBP-0.34□□□□□ -2.46
POLB-202ENST00000517393 LELP1Q5T871 98 aa-0.34□□□□□ -2.46
POLB-202ENST00000517393 CSPG4Q6UVK1 2322 aa-0.34□□□□□ -2.46
POLB-202ENST00000517393 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP-0.34□□□□□ -2.46
POLB-202ENST00000517393 GATD1Q8NB37 220 aa-0.34□□□□□ -2.46
POLB-202ENST00000517393 LINC00526Q96FQ7 95 aa-0.34□□□□□ -2.46
POLB-202ENST00000517393 EBPLQ9BY08 206 aa-0.34□□□□□ -2.46
POLB-202ENST00000517393 CEP250Q9BV73 2442 aa-0.34□□□□□ -2.46
POLB-202ENST00000517393 PCDH15Q96QU1 1955 aa-0.34□□□□□ -2.46
POLB-202ENST00000517393 NBEAQ8NFP9 2946 aa-0.34□□□□□ -2.46
POLB-202ENST00000517393 EYSQ5T1H1 3165 aa-0.35□□□□□ -2.46
POLB-202ENST00000517393 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP-0.35□□□□□ -2.469e-11■■■■■ 68.9
POLB-202ENST00000517393 CHD7Q9P2D1 2997 aa-0.35□□□□□ -2.47
POLB-202ENST00000517393 FLGP20930 4061 aaPredicted RBP-0.35□□□□□ -2.47
POLB-202ENST00000517393 MYH11P35749 1972 aa-0.35□□□□□ -2.47
POLB-202ENST00000517393 BPTFQ12830 3046 aa-0.35□□□□□ -2.47
POLB-202ENST00000517393 TRAV25A0A0B4J276 109 aa-0.35□□□□□ -2.47
POLB-202ENST00000517393 J3QLI3 93 aa-0.35□□□□□ -2.47
POLB-202ENST00000517393 MPHOSPH10O00566 681 aaKnown RBP-0.35□□□□□ -2.47
POLB-202ENST00000517393 SPINK1P00995 79 aa-0.35□□□□□ -2.47
POLB-202ENST00000517393 IGKV5-2P06315 115 aa-0.35□□□□□ -2.47
POLB-202ENST00000517393 PPP1CCP36873 323 aaKnown RBP-0.35□□□□□ -2.47
POLB-202ENST00000517393 CD79BP40259 229 aa-0.35□□□□□ -2.47
POLB-202ENST00000517393 RAB38P57729 211 aa-0.35□□□□□ -2.47
POLB-202ENST00000517393 GABARAPL2P60520 117 aa-0.35□□□□□ -2.47
POLB-202ENST00000517393 PLPPR5Q32ZL2 321 aa-0.35□□□□□ -2.47
POLB-202ENST00000517393 HES3Q5TGS1 186 aa-0.35□□□□□ -2.47
POLB-202ENST00000517393 EBLN2Q6P2I7 272 aa-0.35□□□□□ -2.47
POLB-202ENST00000517393 SPINK6Q6UWN8 80 aa-0.35□□□□□ -2.47
POLB-202ENST00000517393 C7orf65Q6ZTY9 151 aa-0.35□□□□□ -2.47
POLB-202ENST00000517393 PROKR2Q8NFJ6 384 aa-0.35□□□□□ -2.47
POLB-202ENST00000517393 OR4P4Q8NGL7 312 aa-0.35□□□□□ -2.47
POLB-202ENST00000517393 OR9I1Q8NGQ6 314 aa-0.35□□□□□ -2.47
POLB-202ENST00000517393 TSKUQ8WUA8 353 aa-0.35□□□□□ -2.47
POLB-202ENST00000517393 BPIFA3Q9BQP9 254 aa-0.35□□□□□ -2.47
POLB-202ENST00000517393 NIT2Q9NQR4 276 aa-0.35□□□□□ -2.47
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms