RNA–Protein interactions for RNA: ENST00000517393.1

POLB-202, Transcript of DNA polymerase beta, humanhuman

TSL 3

Gene POLB, Length 401 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLB-202ENST00000517393 AEBP2Q6ZN18 517 aaPredicted RBP16.11■□□□□ 0.17
POLB-202ENST00000517393 CHIC1Q5VXU3 224 aa15.48■□□□□ 0.07
POLB-202ENST00000517393 SENP3Q9H4L4 574 aaPredicted RBP13.89□□□□□ -0.19
POLB-202ENST00000517393 PHF23Q9BUL5 403 aaPredicted RBP13.65□□□□□ -0.22
POLB-202ENST00000517393 FOXD1Q16676 465 aa12.82□□□□□ -0.36
POLB-202ENST00000517393 PLPPR3Q6T4P5 718 aa12.48□□□□□ -0.41
POLB-202ENST00000517393 MSH5O43196 834 aa12.1□□□□□ -0.47
POLB-202ENST00000517393 PIAS4Q8N2W9 510 aaPredicted RBP12.05□□□□□ -0.48
POLB-202ENST00000517393 PPP6R1Q9UPN7 881 aa12□□□□□ -0.49
POLB-202ENST00000517393 ADRA2BP18089 450 aa11.99□□□□□ -0.49
POLB-202ENST00000517393 POTEDQ86YR6 584 aa11.54□□□□□ -0.56
POLB-202ENST00000517393 SCAF1Q9H7N4 1312 aaKnown RBP11.17□□□□□ -0.62
POLB-202ENST00000517393 DMRT2Q9Y5R5 561 aa10.98□□□□□ -0.65
POLB-202ENST00000517393 MAPK8IP2Q13387 824 aaPredicted RBP10.96□□□□□ -0.65
POLB-202ENST00000517393 PPP4R3CPQ6ZMV5 832 aa10.88□□□□□ -0.67
POLB-202ENST00000517393 CNKSR2Q8WXI2 1034 aa10.71□□□□□ -0.69
POLB-202ENST00000517393 HOXD11P31277 338 aaPredicted RBP10.62□□□□□ -0.71
POLB-202ENST00000517393 NCBP3Q53F19 620 aaKnown RBP10.6□□□□□ -0.71
POLB-202ENST00000517393 RNF216Q9NWF9 866 aaPredicted RBP10.59□□□□□ -0.71
POLB-202ENST00000517393 DCAF8L1A6NGE4 600 aa10.52□□□□□ -0.73
POLB-202ENST00000517393 DNAJC5BQ9UF47 199 aa10.34□□□□□ -0.75
POLB-202ENST00000517393 NPM3O75607 178 aaKnown RBP10.32□□□□□ -0.76
POLB-202ENST00000517393 CACNB1Q02641 598 aaPredicted RBP10.28□□□□□ -0.76
POLB-202ENST00000517393 RNF39Q9H2S5 420 aa10.26□□□□□ -0.77
POLB-202ENST00000517393 C1QBPQ07021 282 aaKnown RBP10.19□□□□□ -0.78
POLB-202ENST00000517393 KCNA4P22459 653 aa10.16□□□□□ -0.78
POLB-202ENST00000517393 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.14□□□□□ -0.79
POLB-202ENST00000517393 U3KPZ7 1027 aaPredicted RBP9.86□□□□□ -0.83
POLB-202ENST00000517393 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.8□□□□□ -0.84
POLB-202ENST00000517393 APLP2Q06481 763 aa9.8□□□□□ -0.84
POLB-202ENST00000517393 HNRNPUL2Q1KMD3 747 aaKnown RBP9.8□□□□□ -0.84
POLB-202ENST00000517393 SLC4A2P04920 1241 aa9.79□□□□□ -0.84
POLB-202ENST00000517393 CAPN15O75808 1086 aa9.72□□□□□ -0.85
POLB-202ENST00000517393 SAMD1Q6SPF0 538 aaPredicted RBP9.7□□□□□ -0.86
POLB-202ENST00000517393 SLC4A1APQ9BWU0 796 aaKnown RBP9.68□□□□□ -0.86
POLB-202ENST00000517393 SPINK5Q9NQ38 1064 aaPredicted RBP9.67□□□□□ -0.86
POLB-202ENST00000517393 ZNF219Q9P2Y4 722 aaPredicted RBP9.65□□□□□ -0.86
POLB-202ENST00000517393 DSG3P32926 999 aa9.63□□□□□ -0.87
POLB-202ENST00000517393 MYCNP04198 464 aaPredicted RBP9.61□□□□□ -0.87
POLB-202ENST00000517393 TRHP20396 242 aaPredicted RBP9.57□□□□□ -0.88
POLB-202ENST00000517393 FOXD4L1Q9NU39 408 aa9.54□□□□□ -0.88
POLB-202ENST00000517393 ABCB7O75027 752 aa9.43□□□□□ -0.9
POLB-202ENST00000517393 POLA2Q14181 598 aa9.33□□□□□ -0.92
POLB-202ENST00000517393 ATXN8OSP0DMR3 200 aa9.3□□□□□ -0.92
POLB-202ENST00000517393 RBM42Q9BTD8 480 aaKnown RBP9.3□□□□□ -0.92
POLB-202ENST00000517393 ZBTB22O15209 634 aa9.29□□□□□ -0.92
POLB-202ENST00000517393 ZBTB12Q9Y330 459 aaPredicted RBP9.29□□□□□ -0.92
POLB-202ENST00000517393 ATF5Q9Y2D1 282 aaPredicted RBP9.23□□□□□ -0.93
POLB-202ENST00000517393 POTEHQ6S545 545 aa9.1□□□□□ -0.95
POLB-202ENST00000517393 AKT1S1Q96B36 256 aa9.06□□□□□ -0.96
POLB-202ENST00000517393 FBLN2P98095 1184 aa9.05□□□□□ -0.96
POLB-202ENST00000517393 OSCARQ8IYS5 282 aa9.01□□□□□ -0.97
POLB-202ENST00000517393 CSRNP3Q8WYN3 585 aa8.99□□□□□ -0.97
POLB-202ENST00000517393 CHRDL2Q6WN34 429 aa8.97□□□□□ -0.97
POLB-202ENST00000517393 SPDYE2BA6NHP3 402 aa8.95□□□□□ -0.98
POLB-202ENST00000517393 SPDYE6P0CI01 402 aa8.95□□□□□ -0.98
POLB-202ENST00000517393 SPDYE2Q495Y8 402 aa8.95□□□□□ -0.98
POLB-202ENST00000517393 EHMT2Q96KQ7 1210 aa8.93□□□□□ -0.98
POLB-202ENST00000517393 REM2Q8IYK8 340 aaPredicted RBP8.92□□□□□ -0.98
POLB-202ENST00000517393 MKRN4PQ13434 485 aaPredicted RBP8.84□□□□□ -0.99
POLB-202ENST00000517393 ZNF692Q9BU19 519 aaPredicted RBP8.83□□□□□ -1
POLB-202ENST00000517393 PITPNM1O00562 1244 aa8.79□□□□□ -1
POLB-202ENST00000517393 SSUH2Q9Y2M2 353 aa8.79□□□□□ -1
POLB-202ENST00000517393 SPDYE1Q8NFV5 336 aaPredicted RBP8.78□□□□□ -1
POLB-202ENST00000517393 PIP4P2Q8N4L2 257 aa8.75□□□□□ -1.01
POLB-202ENST00000517393 FXR2P51116 673 aaKnown RBP eCLIP8.73□□□□□ -1.01
POLB-202ENST00000517393 CLEC11AQ9Y240 323 aa8.7□□□□□ -1.02
POLB-202ENST00000517393 PABPN1Q86U42 306 aaKnown RBP eCLIP8.67□□□□□ -1.02
POLB-202ENST00000517393 HAX1O00165 279 aa8.61□□□□□ -1.03
POLB-202ENST00000517393 PRR29P0C7W0 189 aa8.6□□□□□ -1.03
POLB-202ENST00000517393 PRKAR2AP13861 404 aaKnown RBP8.6□□□□□ -1.03
POLB-202ENST00000517393 SP7Q8TDD2 431 aaPredicted RBP8.58□□□□□ -1.04
POLB-202ENST00000517393 SPDYE4A6NLX3 237 aa8.56□□□□□ -1.04
POLB-202ENST00000517393 STAG3Q9UJ98 1225 aa8.56□□□□□ -1.04
POLB-202ENST00000517393 CHADLQ6NUI6 762 aa8.45□□□□□ -1.06
POLB-202ENST00000517393 C19orf67A6NJJ6 358 aa8.44□□□□□ -1.06
POLB-202ENST00000517393 FARP1Q9Y4F1 1045 aaPredicted RBP8.41□□□□□ -1.06
POLB-202ENST00000517393 CLCN6P51797 869 aa8.37□□□□□ -1.07
POLB-202ENST00000517393 EVX2Q03828 476 aa8.37□□□□□ -1.07
POLB-202ENST00000517393 CD44P16070 742 aaKnown RBP8.34□□□□□ -1.07
POLB-202ENST00000517393 PROM2Q8N271 834 aa8.34□□□□□ -1.07
POLB-202ENST00000517393 CREBZFQ9NS37 354 aa8.34□□□□□ -1.07
POLB-202ENST00000517393 NPM1P06748 294 aaKnown RBP eCLIP8.32□□□□□ -1.08
POLB-202ENST00000517393 PAK3O75914 559 aaPredicted RBP8.29□□□□□ -1.08
POLB-202ENST00000517393 GABBR2O75899 941 aa8.28□□□□□ -1.08
POLB-202ENST00000517393 PLEKHG5O94827 1062 aa8.27□□□□□ -1.09
POLB-202ENST00000517393 ZNF579Q8NAF0 562 aaKnown RBP8.23□□□□□ -1.09
POLB-202ENST00000517393 ZRANB1Q9UGI0 708 aa8.23□□□□□ -1.09
POLB-202ENST00000517393 MNX1P50219 401 aaPredicted RBP8.19□□□□□ -1.1
POLB-202ENST00000517393 FKBP8Q14318 412 aa8.18□□□□□ -1.1
POLB-202ENST00000517393 MIER1Q8N108 512 aa8.17□□□□□ -1.1
POLB-202ENST00000517393 DCBLD2Q96PD2 775 aa8.15□□□□□ -1.1
POLB-202ENST00000517393 ZBTB47Q9UFB7 747 aaPredicted RBP8.15□□□□□ -1.1
POLB-202ENST00000517393 PLCD3Q8N3E9 789 aa8.13□□□□□ -1.11
POLB-202ENST00000517393 FBXO3Q9UK99 471 aa8.12□□□□□ -1.11
POLB-202ENST00000517393 PHF12Q96QT6 1004 aa8.06□□□□□ -1.12
POLB-202ENST00000517393 TSPYL2Q9H2G4 693 aaPredicted RBP8.06□□□□□ -1.12
POLB-202ENST00000517393 GALR2O43603 387 aaPredicted RBP8.05□□□□□ -1.12
POLB-202ENST00000517393 POTEIP0CG38 1075 aa8.05□□□□□ -1.12
POLB-202ENST00000517393 LHX8Q68G74 356 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms