RNA–Protein interactions for RNA: ENST00000514536.5

USP46-209, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 2

Gene USP46, Length 1,589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-209ENST00000514536 RAB2BQ8WUD1 216 aa11.16□□□□□ -0.62
USP46-209ENST00000514536 EDARADDQ8WWZ3 215 aa11.16□□□□□ -0.62
USP46-209ENST00000514536 ACOT12Q8WYK0 555 aa11.16□□□□□ -0.62
USP46-209ENST00000514536 RBMXL1Q96E39 390 aaKnown RBP11.16□□□□□ -0.62
USP46-209ENST00000514536 ABHD14BQ96IU4 210 aa11.16□□□□□ -0.62
USP46-209ENST00000514536 CABLES2Q9BTV7 478 aa11.16□□□□□ -0.62
USP46-209ENST00000514536 ZNF747Q9BV97 191 aa11.16□□□□□ -0.62
USP46-209ENST00000514536 IFI27L2Q9H2X8 130 aa11.16□□□□□ -0.62
USP46-209ENST00000514536 RANBP3Q9H6Z4 567 aaPredicted RBP11.16□□□□□ -0.62
USP46-209ENST00000514536 RNF150Q9ULK6 438 aa11.16□□□□□ -0.62
USP46-209ENST00000514536 SAA2-SAA4A0A096LPE2 208 aa11.15□□□□□ -0.62
USP46-209ENST00000514536 TRBV6-7A0A0A0MS04 114 aa11.15□□□□□ -0.62
USP46-209ENST00000514536 ITGB1BP1O14713 200 aa11.15□□□□□ -0.62
USP46-209ENST00000514536 TXNL1O43396 289 aa11.15□□□□□ -0.62
USP46-209ENST00000514536 SAA2P0DJI9 122 aaPredicted RBP11.15□□□□□ -0.62
USP46-209ENST00000514536 TMEM11P17152 192 aa11.15□□□□□ -0.62
USP46-209ENST00000514536 HABP2Q14520 560 aaPredicted RBP11.15□□□□□ -0.62
USP46-209ENST00000514536 TMEM69Q5SWH9 247 aa11.15□□□□□ -0.62
USP46-209ENST00000514536 MZT2AQ6P582 158 aa11.15□□□□□ -0.62
USP46-209ENST00000514536 NBEAL1Q6ZS30 2694 aa11.15□□□□□ -0.62
USP46-209ENST00000514536 C16orf82Q7Z2V1 217 aa11.15□□□□□ -0.62
USP46-209ENST00000514536 AKR1E2Q96JD6 320 aa11.15□□□□□ -0.62
USP46-209ENST00000514536 CMTM3Q96MX0 182 aa11.15□□□□□ -0.62
USP46-209ENST00000514536 AGMATQ9BSE5 352 aa11.15□□□□□ -0.62
USP46-209ENST00000514536 PRSS22Q9GZN4 317 aa11.15□□□□□ -0.62
USP46-209ENST00000514536 PIPOXQ9P0Z9 390 aa11.15□□□□□ -0.62
USP46-209ENST00000514536 RAB29O14966 203 aa11.14□□□□□ -0.63
USP46-209ENST00000514536 HPGDSO60760 199 aa11.14□□□□□ -0.63
USP46-209ENST00000514536 CD1BP29016 333 aa11.14□□□□□ -0.63
USP46-209ENST00000514536 TAS2R20P59543 309 aa11.14□□□□□ -0.63
USP46-209ENST00000514536 EBI3Q14213 229 aa11.14□□□□□ -0.63
USP46-209ENST00000514536 RPL39P5Q59GN2 51 aa11.14□□□□□ -0.63
USP46-209ENST00000514536 Q6ZS46 218 aa11.14□□□□□ -0.63
USP46-209ENST00000514536 ZNF833PQ6ZTB9 187 aa11.14□□□□□ -0.63
USP46-209ENST00000514536 OR2T6Q8NHC8 308 aa11.14□□□□□ -0.63
USP46-209ENST00000514536 AP3S1Q92572 193 aa11.14□□□□□ -0.63
USP46-209ENST00000514536 EAF1Q96JC9 268 aaPredicted RBP11.14□□□□□ -0.63
USP46-209ENST00000514536 ZNF251Q9BRH9 671 aa11.14□□□□□ -0.63
USP46-209ENST00000514536 GINS4Q9BRT9 223 aa11.14□□□□□ -0.63
USP46-209ENST00000514536 MRPL20Q9BYC9 149 aaKnown RBP11.14□□□□□ -0.63
USP46-209ENST00000514536 TOLLIPQ9H0E2 274 aa11.14□□□□□ -0.63
USP46-209ENST00000514536 ZNF702PQ9H963 129 aa11.14□□□□□ -0.63
USP46-209ENST00000514536 NOL3O60936 208 aaKnown RBP11.13□□□□□ -0.63
USP46-209ENST00000514536 DIRAS3O95661 229 aa11.13□□□□□ -0.63
USP46-209ENST00000514536 APOA1P02647 267 aa11.13□□□□□ -0.63
USP46-209ENST00000514536 FCER2P06734 321 aa11.13□□□□□ -0.63
USP46-209ENST00000514536 ELK1P19419 428 aa11.13□□□□□ -0.63
USP46-209ENST00000514536 PROK1P58294 105 aa11.13□□□□□ -0.63
USP46-209ENST00000514536 SRSF4Q08170 494 aaKnown RBP11.13□□□□□ -0.63
USP46-209ENST00000514536 GVQW1Q8N7I0 195 aa11.13□□□□□ -0.63
USP46-209ENST00000514536 OR2T10Q8NGZ9 312 aa11.13□□□□□ -0.63
USP46-209ENST00000514536 S1PR3Q99500 378 aa11.13□□□□□ -0.63
USP46-209ENST00000514536 NABP2Q9BQ15 211 aa11.13□□□□□ -0.63
USP46-209ENST00000514536 BCL7BQ9BQE9 202 aa11.13□□□□□ -0.63
USP46-209ENST00000514536 GHITMQ9H3K2 345 aa11.13□□□□□ -0.63
USP46-209ENST00000514536 MRPS7Q9Y2R9 242 aaKnown RBP11.13□□□□□ -0.63
USP46-209ENST00000514536 SMIM31A0A1B0GVY4 71 aa11.12□□□□□ -0.63
USP46-209ENST00000514536 MEIS3P1A6NDR6 274 aa11.12□□□□□ -0.63
USP46-209ENST00000514536 SH2D7A6NKC9 451 aaPredicted RBP11.12□□□□□ -0.63
USP46-209ENST00000514536 FAM25AB3EWG3 89 aa11.12□□□□□ -0.63
USP46-209ENST00000514536 FAM25CB3EWG5 89 aa11.12□□□□□ -0.63
USP46-209ENST00000514536 FAM25GB3EWG6 89 aa11.12□□□□□ -0.63
USP46-209ENST00000514536 MOSP00540 346 aa11.12□□□□□ -0.63
USP46-209ENST00000514536 AMY1AP04745 511 aa11.12□□□□□ -0.63
USP46-209ENST00000514536 AMY2AP04746 511 aa11.12□□□□□ -0.63
USP46-209ENST00000514536 CTXN2P0C2S0 81 aa11.12□□□□□ -0.63
USP46-209ENST00000514536 OR8U9P0C7N5 309 aa11.12□□□□□ -0.63
USP46-209ENST00000514536 SOX6P35712 828 aa11.12□□□□□ -0.63
USP46-209ENST00000514536 LSAMPQ13449 338 aa11.12□□□□□ -0.63
USP46-209ENST00000514536 ABCA11PQ4W5N1 156 aa11.12□□□□□ -0.63
USP46-209ENST00000514536 ARSJQ5FYB0 599 aaPredicted RBP11.12□□□□□ -0.63
USP46-209ENST00000514536 CNIH2Q6PI25 160 aa11.12□□□□□ -0.63
USP46-209ENST00000514536 HOGA1Q86XE5 327 aa11.12□□□□□ -0.63
USP46-209ENST00000514536 Q8N2B8 174 aa11.12□□□□□ -0.63
USP46-209ENST00000514536 OR8U1Q8NH10 309 aa11.12□□□□□ -0.63
USP46-209ENST00000514536 WFDC12Q8WWY7 111 aa11.12□□□□□ -0.63
USP46-209ENST00000514536 ISOC1Q96CN7 298 aa11.12□□□□□ -0.63
USP46-209ENST00000514536 ANXA10Q9UJ72 324 aa11.12□□□□□ -0.63
USP46-209ENST00000514536 ZNF221Q9UK13 617 aa11.12□□□□□ -0.63
USP46-209ENST00000514536 MOB4Q9Y3A3 225 aa11.12□□□□□ -0.63
USP46-209ENST00000514536 CEPT1Q9Y6K0 416 aa11.12□□□□□ -0.63
USP46-209ENST00000514536 NCBP2LA6PVI3 153 aaKnown RBP11.11□□□□□ -0.63
USP46-209ENST00000514536 H3BMQ9 156 aa11.11□□□□□ -0.63
USP46-209ENST00000514536 J3QRK9 145 aa11.11□□□□□ -0.63
USP46-209ENST00000514536 M0QZK8 103 aa11.11□□□□□ -0.63
USP46-209ENST00000514536 PROP1O75360 226 aa11.11□□□□□ -0.63
USP46-209ENST00000514536 HLA-DQB1P01920 261 aa11.11□□□□□ -0.63
USP46-209ENST00000514536 CT45A6P0DMU7 189 aa11.11□□□□□ -0.63
USP46-209ENST00000514536 CT45A5P0DMU8 189 aa11.11□□□□□ -0.63
USP46-209ENST00000514536 CT45A7P0DMV0 189 aa11.11□□□□□ -0.63
USP46-209ENST00000514536 GPR12P47775 334 aa11.11□□□□□ -0.63
USP46-209ENST00000514536 KRTAP10-3P60369 221 aa11.11□□□□□ -0.63
USP46-209ENST00000514536 FAM71F2Q6NXP2 309 aa11.11□□□□□ -0.63
USP46-209ENST00000514536 SHISA2Q6UWI4 295 aa11.11□□□□□ -0.63
USP46-209ENST00000514536 H1FOOQ8IZA3 346 aaPredicted RBP11.11□□□□□ -0.63
USP46-209ENST00000514536 BEST4Q8NFU0 473 aa11.11□□□□□ -0.63
USP46-209ENST00000514536 RBM7Q9Y580 266 aaKnown RBP11.11□□□□□ -0.63
USP46-209ENST00000514536 VSIG10L2P0DP72 767 aa11.11□□□□□ -0.63
USP46-209ENST00000514536 NFYAP23511 347 aaPredicted RBP11.11□□□□□ -0.63
USP46-209ENST00000514536 PRSS3P35030 304 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms