RNA–Protein interactions for RNA: ENST00000507965.5

ATXN3-210, Transcript of ataxin 3, human

TSL 2

Gene ATXN3, Length 708 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATXN3-210	ENST00000507965	DHDH	Q9UQ10	334 aa		4.28	□□□□□ -1.72
ATXN3-210	ENST00000507965	ST3GAL6	Q9Y274	331 aa		4.28	□□□□□ -1.72
ATXN3-210	ENST00000507965	FBXO7	Q9Y3I1	522 aa		4.28	□□□□□ -1.72
ATXN3-210	ENST00000507965	AP4S1	Q9Y587	144 aa		4.28	□□□□□ -1.72
ATXN3-210	ENST00000507965	WSB1	Q9Y6I7	421 aa		4.28	□□□□□ -1.72
ATXN3-210	ENST00000507965	SMAD5-AS1	Q9Y6J3	95 aa		4.28	□□□□□ -1.72
ATXN3-210	ENST00000507965	HYDIN	Q4G0P3	5121 aa		4.28	□□□□□ -1.72
ATXN3-210	ENST00000507965	TENM2	Q9NT68	2774 aa		4.28	□□□□□ -1.72
ATXN3-210	ENST00000507965	CSMD3	Q7Z407	3707 aa		4.28	□□□□□ -1.73
ATXN3-210	ENST00000507965	TMEM30CP	A0ZSE6	113 aa		4.27	□□□□□ -1.73
ATXN3-210	ENST00000507965	TMEM212	A6NML5	194 aa		4.27	□□□□□ -1.73
ATXN3-210	ENST00000507965	C12orf77	C9JDV5	145 aa		4.27	□□□□□ -1.73
ATXN3-210	ENST00000507965	AIP	O00170	330 aa		4.27	□□□□□ -1.73
ATXN3-210	ENST00000507965	EI24	O14681	340 aa		4.27	□□□□□ -1.73
ATXN3-210	ENST00000507965	SOX15	O60248	233 aa		4.27	□□□□□ -1.73
ATXN3-210	ENST00000507965	SAP30	O75446	220 aa		4.27	□□□□□ -1.73
ATXN3-210	ENST00000507965	IGF1	P05019	195 aa		4.27	□□□□□ -1.73
ATXN3-210	ENST00000507965	OR8U8	P0C7N1	319 aa		4.27	□□□□□ -1.73
ATXN3-210	ENST00000507965	RAB3A	P20336	220 aa		4.27	□□□□□ -1.73
ATXN3-210	ENST00000507965	CD1B	P29016	333 aa		4.27	□□□□□ -1.73
ATXN3-210	ENST00000507965	BLVRB	P30043	206 aa	Predicted RBP	4.27	□□□□□ -1.73
ATXN3-210	ENST00000507965	SOX6	P35712	828 aa		4.27	□□□□□ -1.73
ATXN3-210	ENST00000507965	TIRAP	P58753	221 aa		4.27	□□□□□ -1.73
ATXN3-210	ENST00000507965	ADARB1	P78563	741 aa	Known RBP	4.27	□□□□□ -1.73
ATXN3-210	ENST00000507965	NDP	Q00604	133 aa		4.27	□□□□□ -1.73
ATXN3-210	ENST00000507965	ZNF616	Q08AN1	781 aa		4.27	□□□□□ -1.73
ATXN3-210	ENST00000507965	MMD	Q15546	238 aa		4.27	□□□□□ -1.73
ATXN3-210	ENST00000507965	SRSF7	Q16629	238 aa	Known RBP eCLIP	4.27	□□□□□ -1.73
ATXN3-210	ENST00000507965	KLHL22	Q53GT1	634 aa		4.27	□□□□□ -1.73
ATXN3-210	ENST00000507965	ATAD3C	Q5T2N8	411 aa		4.27	□□□□□ -1.73
ATXN3-210	ENST00000507965	DDI2	Q5TDH0	399 aa		4.27	□□□□□ -1.73
ATXN3-210	ENST00000507965	ADAMTSL5	Q6ZMM2	481 aa		4.27	□□□□□ -1.73
ATXN3-210	ENST00000507965	SLC25A48	Q6ZT89	311 aa	Known RBP	4.27	□□□□□ -1.73
ATXN3-210	ENST00000507965	SERPINA12	Q8IW75	414 aa		4.27	□□□□□ -1.73
ATXN3-210	ENST00000507965	LINC00311	Q8N616	119 aa		4.27	□□□□□ -1.73
ATXN3-210	ENST00000507965	ACBD7	Q8N6N7	88 aa		4.27	□□□□□ -1.73
ATXN3-210	ENST00000507965	ZNF491	Q8N8L2	437 aa		4.27	□□□□□ -1.73
ATXN3-210	ENST00000507965	OR10A7	Q8NGE5	316 aa		4.27	□□□□□ -1.73
ATXN3-210	ENST00000507965	OR5D14	Q8NGL3	314 aa		4.27	□□□□□ -1.73
ATXN3-210	ENST00000507965	OR1N2	Q8NGR9	330 aa		4.27	□□□□□ -1.73
ATXN3-210	ENST00000507965	OR4K15	Q8NH41	348 aa		4.27	□□□□□ -1.73
ATXN3-210	ENST00000507965	OR5AK2	Q8NH90	309 aa		4.27	□□□□□ -1.73
ATXN3-210	ENST00000507965	OR1L1	Q8NH94	360 aa		4.27	□□□□□ -1.73
ATXN3-210	ENST00000507965	NEK7	Q8TDX7	302 aa		4.27	□□□□□ -1.73
ATXN3-210	ENST00000507965	DCUN1D4	Q92564	292 aa		4.27	□□□□□ -1.73
ATXN3-210	ENST00000507965	RITA1	Q96K30	269 aa		4.27	□□□□□ -1.73
ATXN3-210	ENST00000507965	GON7	Q9BXV9	100 aa		4.27	□□□□□ -1.73
ATXN3-210	ENST00000507965	KRTAP1-5	Q9BYS1	174 aa		4.27	□□□□□ -1.73
ATXN3-210	ENST00000507965	VCX	Q9H320	206 aa		4.27	□□□□□ -1.73
ATXN3-210	ENST00000507965	VCX3B	Q9H321	246 aa		4.27	□□□□□ -1.73
ATXN3-210	ENST00000507965	AMBN	Q9NP70	447 aa		4.27	□□□□□ -1.73
ATXN3-210	ENST00000507965	PARP11	Q9NR21	331 aa		4.27	□□□□□ -1.73
ATXN3-210	ENST00000507965	ZNF107	Q9UII5	783 aa	Predicted RBP	4.27	□□□□□ -1.73
ATXN3-210	ENST00000507965	RAB26	Q9ULW5	256 aa		4.27	□□□□□ -1.73
ATXN3-210	ENST00000507965	EXOG	Q9Y2C4	368 aa	Known RBP	4.27	□□□□□ -1.73
ATXN3-210	ENST00000507965	SACS	Q9NZJ4	4579 aa		4.27	□□□□□ -1.73
ATXN3-210	ENST00000507965	LYST	Q99698	3801 aa		4.27	□□□□□ -1.73
ATXN3-210	ENST00000507965	DNAH7	Q8WXX0	4024 aa		4.26	□□□□□ -1.73
ATXN3-210	ENST00000507965	IGHV4OR15-8	A0A075B7B6	117 aa		4.26	□□□□□ -1.73
ATXN3-210	ENST00000507965		A0A087WW49	117 aa		4.26	□□□□□ -1.73
ATXN3-210	ENST00000507965	IGHV7-81	A0A0B4J1V7	117 aa		4.26	□□□□□ -1.73
ATXN3-210	ENST00000507965		F5H697	171 aa		4.26	□□□□□ -1.73
ATXN3-210	ENST00000507965	OVOL1	O14753	267 aa		4.26	□□□□□ -1.73
ATXN3-210	ENST00000507965	ALPL	P05186	524 aa		4.26	□□□□□ -1.73
ATXN3-210	ENST00000507965	LYL1	P12980	280 aa		4.26	□□□□□ -1.73
ATXN3-210	ENST00000507965	GP9	P14770	177 aa		4.26	□□□□□ -1.73
ATXN3-210	ENST00000507965	GABRB1	P18505	474 aa		4.26	□□□□□ -1.73
ATXN3-210	ENST00000507965	IL3RA	P26951	378 aa		4.26	□□□□□ -1.73
ATXN3-210	ENST00000507965	KCNJ3	P48549	501 aa		4.26	□□□□□ -1.73
ATXN3-210	ENST00000507965	ZNF137P	P52743	207 aa		4.26	□□□□□ -1.73
ATXN3-210	ENST00000507965	SNRPG	P62308	76 aa	Known RBP	4.26	□□□□□ -1.73
ATXN3-210	ENST00000507965	MED21	Q13503	144 aa		4.26	□□□□□ -1.73
ATXN3-210	ENST00000507965	ECSCR	Q19T08	205 aa		4.26	□□□□□ -1.73
ATXN3-210	ENST00000507965	CD300E	Q496F6	205 aa	Predicted RBP	4.26	□□□□□ -1.73
ATXN3-210	ENST00000507965	CT45A1	Q5HYN5	189 aa		4.26	□□□□□ -1.73
ATXN3-210	ENST00000507965	NHLRC3	Q5JS37	347 aa		4.26	□□□□□ -1.73
ATXN3-210	ENST00000507965	FAM90A2P	Q658T7	463 aa		4.26	□□□□□ -1.73
ATXN3-210	ENST00000507965	DGAT2L7P	Q6IED9	249 aa		4.26	□□□□□ -1.73
ATXN3-210	ENST00000507965	ASCL4	Q6XD76	172 aa		4.26	□□□□□ -1.73
ATXN3-210	ENST00000507965	ZNF497	Q6ZNH5	498 aa		4.26	□□□□□ -1.73
ATXN3-210	ENST00000507965	SLC16A12	Q6ZSM3	486 aa		4.26	□□□□□ -1.73
ATXN3-210	ENST00000507965	ODF3L1	Q8IXM7	274 aa		4.26	□□□□□ -1.73
ATXN3-210	ENST00000507965	SYS1	Q8N2H4	156 aa		4.26	□□□□□ -1.73
ATXN3-210	ENST00000507965	C8orf31	Q8N9H6	132 aa		4.26	□□□□□ -1.73
ATXN3-210	ENST00000507965		Q8N9P0	234 aa	Predicted RBP	4.26	□□□□□ -1.73
ATXN3-210	ENST00000507965	OR52M1	Q8NGK5	317 aa		4.26	□□□□□ -1.73
ATXN3-210	ENST00000507965	OR52I1	Q8NGK6	324 aa		4.26	□□□□□ -1.73
ATXN3-210	ENST00000507965	OR52N1	Q8NH53	320 aa		4.26	□□□□□ -1.73
ATXN3-210	ENST00000507965	CT45A3	Q8NHU0	189 aa		4.26	□□□□□ -1.73
ATXN3-210	ENST00000507965	ARPC1A	Q92747	370 aa		4.26	□□□□□ -1.73
ATXN3-210	ENST00000507965	DLX4	Q92988	240 aa	Predicted RBP	4.26	□□□□□ -1.73
ATXN3-210	ENST00000507965	TMEM106A	Q96A25	262 aa		4.26	□□□□□ -1.73
ATXN3-210	ENST00000507965	CENPN	Q96H22	339 aa	Predicted RBP	4.26	□□□□□ -1.73
ATXN3-210	ENST00000507965	UBE2E2	Q96LR5	201 aa		4.26	□□□□□ -1.73
ATXN3-210	ENST00000507965	SLC29A1	Q99808	456 aa		4.26	□□□□□ -1.73
ATXN3-210	ENST00000507965	MRPL20	Q9BYC9	149 aa	Known RBP	4.26	□□□□□ -1.73
ATXN3-210	ENST00000507965	PALMD	Q9NP74	551 aa		4.26	□□□□□ -1.73
ATXN3-210	ENST00000507965	IL36G	Q9NZH8	169 aa		4.26	□□□□□ -1.73
ATXN3-210	ENST00000507965	GNG12	Q9UBI6	72 aa		4.26	□□□□□ -1.73
ATXN3-210	ENST00000507965	ZNF580	Q9UK33	172 aa		4.26	□□□□□ -1.73

Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms