RNA–Protein interactions for RNA: ENST00000505976.5

OTUD4-206, Transcript of OTU deubiquitinase 4, human

TSL 5

Gene OTUD4, Length 671 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
OTUD4-206	ENST00000505976	IGLV1-40	P01703	118 aa		13.5	□□□□□ -0.25
OTUD4-206	ENST00000505976	LUM	P51884	338 aa	Predicted RBP	13.5	□□□□□ -0.25
OTUD4-206	ENST00000505976	RPS25	P62851	125 aa	Known RBP	13.5	□□□□□ -0.25
OTUD4-206	ENST00000505976	C9orf66	Q5T8R8	295 aa		13.5	□□□□□ -0.25
OTUD4-206	ENST00000505976	ZNF491	Q8N8L2	437 aa		13.5	□□□□□ -0.25
OTUD4-206	ENST00000505976	TMEM203	Q969S6	136 aa		13.5	□□□□□ -0.25
OTUD4-206	ENST00000505976	HDHD3	Q9BSH5	251 aa	Predicted RBP	13.5	□□□□□ -0.25
OTUD4-206	ENST00000505976	PARP12	Q9H0J9	701 aa	Known RBP	13.5	□□□□□ -0.25
OTUD4-206	ENST00000505976	PLEKHJ1	Q9NW61	149 aa		13.5	□□□□□ -0.25
OTUD4-206	ENST00000505976	SLC23A1	Q9UHI7	598 aa		13.5	□□□□□ -0.25
OTUD4-206	ENST00000505976	AK3	Q9UIJ7	227 aa		13.5	□□□□□ -0.25
OTUD4-206	ENST00000505976	WSB1	Q9Y6I7	421 aa		13.5	□□□□□ -0.25
OTUD4-206	ENST00000505976		I3L521	148 aa		13.49	□□□□□ -0.25
OTUD4-206	ENST00000505976	ITGB1BP1	O14713	200 aa		13.49	□□□□□ -0.25
OTUD4-206	ENST00000505976	RAB29	O14966	203 aa		13.49	□□□□□ -0.25
OTUD4-206	ENST00000505976	RAMP3	O60896	148 aa		13.49	□□□□□ -0.25
OTUD4-206	ENST00000505976	CRIP2	P52943	208 aa	Predicted RBP	13.49	□□□□□ -0.25
OTUD4-206	ENST00000505976	TMEM50B	P56557	158 aa		13.49	□□□□□ -0.25
OTUD4-206	ENST00000505976	RUNX1	Q01196	453 aa		13.49	□□□□□ -0.25
OTUD4-206	ENST00000505976	CD69	Q07108	199 aa		13.49	□□□□□ -0.25
OTUD4-206	ENST00000505976	DCTN2	Q13561	401 aa	Known RBP	13.49	□□□□□ -0.25
OTUD4-206	ENST00000505976	RPL39P5	Q59GN2	51 aa		13.49	□□□□□ -0.25
OTUD4-206	ENST00000505976	C19orf54	Q5BKX5	351 aa		13.49	□□□□□ -0.25
OTUD4-206	ENST00000505976	ASPHD1	Q5U4P2	390 aa		13.49	□□□□□ -0.25
OTUD4-206	ENST00000505976	LIN54	Q6MZP7	749 aa		13.49	□□□□□ -0.25
OTUD4-206	ENST00000505976	FAM131A	Q6UXB0	335 aa		13.49	□□□□□ -0.25
OTUD4-206	ENST00000505976	UBE2E2	Q96LR5	201 aa		13.49	□□□□□ -0.25
OTUD4-206	ENST00000505976	AGMAT	Q9BSE5	352 aa		13.49	□□□□□ -0.25
OTUD4-206	ENST00000505976	URM1	Q9BTM9	101 aa	Known RBP	13.49	□□□□□ -0.25
OTUD4-206	ENST00000505976	RIMS4	Q9H426	269 aa	Predicted RBP	13.49	□□□□□ -0.25
OTUD4-206	ENST00000505976	GNB4	Q9HAV0	340 aa		13.49	□□□□□ -0.25
OTUD4-206	ENST00000505976	CHMP1A	Q9HD42	196 aa	Predicted RBP	13.49	□□□□□ -0.25
OTUD4-206	ENST00000505976	PARP11	Q9NR21	331 aa		13.49	□□□□□ -0.25
OTUD4-206	ENST00000505976	SCOC	Q9UIL1	159 aa		13.49	□□□□□ -0.25
OTUD4-206	ENST00000505976	TPRKB	Q9Y3C4	175 aa		13.49	□□□□□ -0.25
OTUD4-206	ENST00000505976	TRAV41	A0A0B4J266	112 aa		13.48	□□□□□ -0.25
OTUD4-206	ENST00000505976	CT45A6	P0DMU7	189 aa		13.48	□□□□□ -0.25
OTUD4-206	ENST00000505976	CT45A5	P0DMU8	189 aa		13.48	□□□□□ -0.25
OTUD4-206	ENST00000505976	CT45A7	P0DMV0	189 aa		13.48	□□□□□ -0.25
OTUD4-206	ENST00000505976	ARSB	P15848	533 aa		13.48	□□□□□ -0.25
OTUD4-206	ENST00000505976	CPE	P16870	476 aa		13.48	□□□□□ -0.25
OTUD4-206	ENST00000505976	HLA-DRB3	P79483	266 aa		13.48	□□□□□ -0.25
OTUD4-206	ENST00000505976	NDP	Q00604	133 aa		13.48	□□□□□ -0.25
OTUD4-206	ENST00000505976	P2RY14	Q15391	338 aa		13.48	□□□□□ -0.25
OTUD4-206	ENST00000505976	TRAM1	Q15629	374 aa		13.48	□□□□□ -0.25
OTUD4-206	ENST00000505976	MINDY2	Q8NBR6	621 aa		13.48	□□□□□ -0.25
OTUD4-206	ENST00000505976	OR11H1	Q8NG94	326 aa		13.48	□□□□□ -0.25
OTUD4-206	ENST00000505976	SETD6	Q8TBK2	473 aa		13.48	□□□□□ -0.25
OTUD4-206	ENST00000505976	OR1A1	Q9P1Q5	309 aa		13.48	□□□□□ -0.25
OTUD4-206	ENST00000505976	KIAA1456	Q9P272	454 aa		13.48	□□□□□ -0.25
OTUD4-206	ENST00000505976	HSF4	Q9ULV5	492 aa		13.48	□□□□□ -0.25
OTUD4-206	ENST00000505976	AK6	Q9Y3D8	172 aa	Known RBP	13.48	□□□□□ -0.25
OTUD4-206	ENST00000505976	FBXO7	Q9Y3I1	522 aa		13.48	□□□□□ -0.25
OTUD4-206	ENST00000505976	OR5H14	A6NHG9	310 aa		13.47	□□□□□ -0.25
OTUD4-206	ENST00000505976		H0YJW9	148 aa		13.47	□□□□□ -0.25
OTUD4-206	ENST00000505976	RRH	O14718	337 aa		13.47	□□□□□ -0.25
OTUD4-206	ENST00000505976	HSMCR30	P0CW71	290 aa		13.47	□□□□□ -0.25
OTUD4-206	ENST00000505976	MLLT11	Q13015	90 aa	Predicted RBP	13.47	□□□□□ -0.25
OTUD4-206	ENST00000505976	TMEM65	Q6PI78	240 aa		13.47	□□□□□ -0.25
OTUD4-206	ENST00000505976	GLDN	Q6ZMI3	551 aa	Predicted RBP	13.47	□□□□□ -0.25
OTUD4-206	ENST00000505976	ABHD14B	Q96IU4	210 aa		13.47	□□□□□ -0.25
OTUD4-206	ENST00000505976	GHITM	Q9H3K2	345 aa		13.47	□□□□□ -0.25
OTUD4-206	ENST00000505976	PLGRKT	Q9HBL7	147 aa		13.47	□□□□□ -0.25
OTUD4-206	ENST00000505976		Q9N2K0	584 aa		13.47	□□□□□ -0.25
OTUD4-206	ENST00000505976	VSIG4	Q9Y279	399 aa		13.47	□□□□□ -0.25
OTUD4-206	ENST00000505976	LSM4	Q9Y4Z0	139 aa	Known RBP	13.47	□□□□□ -0.25
OTUD4-206	ENST00000505976	SEC14L6	B5MCN3	397 aa		13.46	□□□□□ -0.25
OTUD4-206	ENST00000505976	RGS10	O43665	173 aa		13.46	□□□□□ -0.25
OTUD4-206	ENST00000505976	PROP1	O75360	226 aa		13.46	□□□□□ -0.25
OTUD4-206	ENST00000505976	ARL6IP5	O75915	188 aa		13.46	□□□□□ -0.25
OTUD4-206	ENST00000505976	SCT	P09683	121 aa		13.46	□□□□□ -0.25
OTUD4-206	ENST00000505976	EGR2	P11161	476 aa	Predicted RBP	13.46	□□□□□ -0.25
OTUD4-206	ENST00000505976	CRHBP	P24387	322 aa		13.46	□□□□□ -0.25
OTUD4-206	ENST00000505976	PSMA1	P25786	263 aa	Known RBP	13.46	□□□□□ -0.25
OTUD4-206	ENST00000505976	RAB9A	P51151	201 aa		13.46	□□□□□ -0.25
OTUD4-206	ENST00000505976	GNB1	P62873	340 aa		13.46	□□□□□ -0.25
OTUD4-206	ENST00000505976	FABP5	Q01469	135 aa		13.46	□□□□□ -0.25
OTUD4-206	ENST00000505976	ZNF660	Q6AZW8	331 aa	Predicted RBP	13.46	□□□□□ -0.25
OTUD4-206	ENST00000505976	OR5AN1	Q8NGI8	311 aa		13.46	□□□□□ -0.25
OTUD4-206	ENST00000505976	PECR	Q9BY49	303 aa		13.46	□□□□□ -0.25
OTUD4-206	ENST00000505976	C11orf54	Q9H0W9	315 aa	Predicted RBP	13.46	□□□□□ -0.25
OTUD4-206	ENST00000505976	FBXL15	Q9H469	300 aa		13.46	□□□□□ -0.25
OTUD4-206	ENST00000505976	MGAT4A	Q9UM21	535 aa		13.46	□□□□□ -0.25
OTUD4-206	ENST00000505976	LDLRAD4	O15165	306 aa		13.45	□□□□□ -0.26
OTUD4-206	ENST00000505976	SOX15	O60248	233 aa		13.45	□□□□□ -0.26
OTUD4-206	ENST00000505976	OR8U8	P0C7N1	319 aa		13.45	□□□□□ -0.26
OTUD4-206	ENST00000505976	ZBTB25	P24278	435 aa		13.45	□□□□□ -0.26
OTUD4-206	ENST00000505976	MC5R	P33032	325 aa		13.45	□□□□□ -0.26
OTUD4-206	ENST00000505976	VEGFC	P49767	419 aa		13.45	□□□□□ -0.26
OTUD4-206	ENST00000505976	CX3CL1	P78423	397 aa		13.45	□□□□□ -0.26
OTUD4-206	ENST00000505976	ZNF616	Q08AN1	781 aa		13.45	□□□□□ -0.26
OTUD4-206	ENST00000505976	RAB11B	Q15907	218 aa		13.45	□□□□□ -0.26
OTUD4-206	ENST00000505976	PRSS48	Q7RTY5	328 aa		13.45	□□□□□ -0.26
OTUD4-206	ENST00000505976	EDARADD	Q8WWZ3	215 aa		13.45	□□□□□ -0.26
OTUD4-206	ENST00000505976	PTX4	Q96A99	478 aa		13.45	□□□□□ -0.26
OTUD4-206	ENST00000505976	ARHGAP5-AS1	Q96IT6	56 aa		13.45	□□□□□ -0.26
OTUD4-206	ENST00000505976	PRR25	Q96S07	402 aa		13.45	□□□□□ -0.26
OTUD4-206	ENST00000505976	C12orf4	Q9NQ89	552 aa		13.45	□□□□□ -0.26
OTUD4-206	ENST00000505976	WASHC3	Q9Y3C0	194 aa		13.45	□□□□□ -0.26
OTUD4-206	ENST00000505976	NUBP2	Q9Y5Y2	271 aa		13.45	□□□□□ -0.26

Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms