RNA–Protein interactions for RNA: ENST00000504557.1

HOXC9-202, Transcript of homeobox C9, humanhuman

TSL 3

Gene HOXC9, Length 581 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC9-202ENST00000504557 MXD1Q05195 221 aa11.26□□□□□ -0.61
HOXC9-202ENST00000504557 OXLD1Q5BKU9 147 aa11.26□□□□□ -0.61
HOXC9-202ENST00000504557 STEAP3Q658P3 488 aa11.26□□□□□ -0.61
HOXC9-202ENST00000504557 OR10R2Q8NGX6 335 aa11.26□□□□□ -0.61
HOXC9-202ENST00000504557 CHPT1Q8WUD6 406 aa11.26□□□□□ -0.61
HOXC9-202ENST00000504557 RITA1Q96K30 269 aa11.26□□□□□ -0.61
HOXC9-202ENST00000504557 NABP2Q9BQ15 211 aa11.26□□□□□ -0.61
HOXC9-202ENST00000504557 HSPB9Q9BQS6 159 aa11.26□□□□□ -0.61
HOXC9-202ENST00000504557 RNF167Q9H6Y7 350 aa11.26□□□□□ -0.61
HOXC9-202ENST00000504557 LIN7CQ9NUP9 197 aaKnown RBP11.26□□□□□ -0.61
HOXC9-202ENST00000504557 DAPK2Q9UIK4 370 aa11.26□□□□□ -0.61
HOXC9-202ENST00000504557 BET1O15155 118 aa11.25□□□□□ -0.61
HOXC9-202ENST00000504557 IGHG2P01859 326 aa11.25□□□□□ -0.61
HOXC9-202ENST00000504557 ZBTB25P24278 435 aa11.25□□□□□ -0.61
HOXC9-202ENST00000504557 ACTBP60709 375 aa11.25□□□□□ -0.61
HOXC9-202ENST00000504557 SLC35B1P78383 322 aa11.25□□□□□ -0.61
HOXC9-202ENST00000504557 ARFRP1Q13795 201 aa11.25□□□□□ -0.61
HOXC9-202ENST00000504557 PDLIM3Q53GG5 364 aaPredicted RBP11.25□□□□□ -0.61
HOXC9-202ENST00000504557 FAM131AQ6UXB0 335 aa11.25□□□□□ -0.61
HOXC9-202ENST00000504557 LCNL1Q6ZST4 164 aa11.25□□□□□ -0.61
HOXC9-202ENST00000504557 ZNF833PQ6ZTB9 187 aa11.25□□□□□ -0.61
HOXC9-202ENST00000504557 C18orf65Q6ZTR6 163 aa11.25□□□□□ -0.61
HOXC9-202ENST00000504557 STPG2Q8N412 459 aa11.25□□□□□ -0.61
HOXC9-202ENST00000504557 DRAXINQ8NBI3 349 aaPredicted RBP11.25□□□□□ -0.61
HOXC9-202ENST00000504557 ZNF251Q9BRH9 671 aa11.25□□□□□ -0.61
HOXC9-202ENST00000504557 C11orf54Q9H0W9 315 aaPredicted RBP11.25□□□□□ -0.61
HOXC9-202ENST00000504557 ABCG5Q9H222 651 aa11.25□□□□□ -0.61
HOXC9-202ENST00000504557 PLSCR3Q9NRY6 295 aa11.25□□□□□ -0.61
HOXC9-202ENST00000504557 ZNF230Q9UIE0 474 aaPredicted RBP11.25□□□□□ -0.61
HOXC9-202ENST00000504557 KCNK7Q9Y2U2 307 aa11.25□□□□□ -0.61
HOXC9-202ENST00000504557 TRBV6-6A0A0A6YYG2 114 aa11.24□□□□□ -0.61
HOXC9-202ENST00000504557 METTL21EPA6NDL7 271 aa11.24□□□□□ -0.61
HOXC9-202ENST00000504557 TRDCB7Z8K6 153 aa11.24□□□□□ -0.61
HOXC9-202ENST00000504557 H7C2Y5 167 aa11.24□□□□□ -0.61
HOXC9-202ENST00000504557 AP4M1O00189 453 aa11.24□□□□□ -0.61
HOXC9-202ENST00000504557 RAB29O14966 203 aa11.24□□□□□ -0.61
HOXC9-202ENST00000504557 CLEC2LP0C7M8 214 aa11.24□□□□□ -0.61
HOXC9-202ENST00000504557 SNRPBP14678 240 aaKnown RBP11.24□□□□□ -0.61
HOXC9-202ENST00000504557 SOX6P35712 828 aa11.24□□□□□ -0.61
HOXC9-202ENST00000504557 PIPOXQ9P0Z9 390 aa11.24□□□□□ -0.61
HOXC9-202ENST00000504557 ELF5Q9UKW6 265 aaPredicted RBP11.24□□□□□ -0.61
HOXC9-202ENST00000504557 MGAT4AQ9UM21 535 aa11.24□□□□□ -0.61
HOXC9-202ENST00000504557 IGKV1-6A0A0C4DH72 117 aa11.23□□□□□ -0.61
HOXC9-202ENST00000504557 NOTOA8MTQ0 251 aa11.23□□□□□ -0.61
HOXC9-202ENST00000504557 FCGR3AP08637 254 aa11.23□□□□□ -0.61
HOXC9-202ENST00000504557 GSTT2P0CG29 244 aa11.23□□□□□ -0.61
HOXC9-202ENST00000504557 GSTT2BP0CG30 244 aa11.23□□□□□ -0.61
HOXC9-202ENST00000504557 IGLL1P15814 213 aa11.23□□□□□ -0.61
HOXC9-202ENST00000504557 HIST1H1DP16402 221 aaKnown RBP11.23□□□□□ -0.61
HOXC9-202ENST00000504557 CD36P16671 472 aa11.23□□□□□ -0.61
HOXC9-202ENST00000504557 RAB6AP20340 208 aa11.23□□□□□ -0.61
HOXC9-202ENST00000504557 GALP22466 123 aa11.23□□□□□ -0.61
HOXC9-202ENST00000504557 FGF9P31371 208 aaPredicted RBP11.23□□□□□ -0.61
HOXC9-202ENST00000504557 SDC2P34741 201 aa11.23□□□□□ -0.61
HOXC9-202ENST00000504557 TALDO1P37837 337 aa11.23□□□□□ -0.61
HOXC9-202ENST00000504557 IGSF11Q5DX21 431 aa11.23□□□□□ -0.61
HOXC9-202ENST00000504557 FAM71E2Q8N5Q1 922 aa11.23□□□□□ -0.61
HOXC9-202ENST00000504557 KLHL30-AS1Q8NEE0 82 aa11.23□□□□□ -0.61
HOXC9-202ENST00000504557 EDARADDQ8WWZ3 215 aa11.23□□□□□ -0.61
HOXC9-202ENST00000504557 KCTD7Q96MP8 289 aa11.23□□□□□ -0.61
HOXC9-202ENST00000504557 DUX3Q96PT4 197 aa11.23□□□□□ -0.61
HOXC9-202ENST00000504557 RDH8Q9NYR8 311 aa11.23□□□□□ -0.61
HOXC9-202ENST00000504557 ZNF107Q9UII5 783 aaPredicted RBP11.23□□□□□ -0.61
HOXC9-202ENST00000504557 ZNF221Q9UK13 617 aa11.23□□□□□ -0.61
HOXC9-202ENST00000504557 RAB27BO00194 218 aa11.22□□□□□ -0.61
HOXC9-202ENST00000504557 MFNGO00587 321 aa11.22□□□□□ -0.61
HOXC9-202ENST00000504557 NBR2O15453 112 aa11.22□□□□□ -0.61
HOXC9-202ENST00000504557 FABP7O15540 132 aa11.22□□□□□ -0.61
HOXC9-202ENST00000504557 RRP9O43818 475 aaKnown RBP11.22□□□□□ -0.61
HOXC9-202ENST00000504557 GSTP1P09211 210 aaKnown RBP11.22□□□□□ -0.61
HOXC9-202ENST00000504557 CT45A6P0DMU7 189 aa11.22□□□□□ -0.61
HOXC9-202ENST00000504557 CT45A5P0DMU8 189 aa11.22□□□□□ -0.61
HOXC9-202ENST00000504557 CT45A7P0DMV0 189 aa11.22□□□□□ -0.61
HOXC9-202ENST00000504557 VDAC1P21796 283 aa11.22□□□□□ -0.61
HOXC9-202ENST00000504557 RPL23AP62750 156 aaKnown RBP11.22□□□□□ -0.61
HOXC9-202ENST00000504557 PLGLAQ15195 96 aa11.22□□□□□ -0.61
HOXC9-202ENST00000504557 LY6G6FQ5SQ64 297 aa11.22□□□□□ -0.61
HOXC9-202ENST00000504557 SAMD5Q5TGI4 173 aa11.22□□□□□ -0.61
HOXC9-202ENST00000504557 C8orf86Q6ZUL3 223 aa11.22□□□□□ -0.61
HOXC9-202ENST00000504557 OR8H1Q8NGG4 311 aa11.22□□□□□ -0.61
HOXC9-202ENST00000504557 LGALS14Q8TCE9 139 aa11.22□□□□□ -0.61
HOXC9-202ENST00000504557 PHF21AQ96BD5 680 aa11.22□□□□□ -0.61
HOXC9-202ENST00000504557 PARP11Q9NR21 331 aa11.22□□□□□ -0.61
HOXC9-202ENST00000504557 KIAA1456Q9P272 454 aa11.22□□□□□ -0.61
HOXC9-202ENST00000504557 RBM7Q9Y580 266 aaKnown RBP11.22□□□□□ -0.61
HOXC9-202ENST00000504557 WSB1Q9Y6I7 421 aa11.22□□□□□ -0.61
HOXC9-202ENST00000504557 J3QRK9 145 aa11.21□□□□□ -0.61
HOXC9-202ENST00000504557 M0R1X1 148 aa11.21□□□□□ -0.61
HOXC9-202ENST00000504557 RPLP1P05386 114 aaKnown RBP11.21□□□□□ -0.61
HOXC9-202ENST00000504557 RAB25P57735 213 aa11.21□□□□□ -0.61
HOXC9-202ENST00000504557 LINC00205P59089 165 aa11.21□□□□□ -0.61
HOXC9-202ENST00000504557 PNLIPRP3Q17RR3 467 aa11.21□□□□□ -0.61
HOXC9-202ENST00000504557 BEAN1Q3B7T3 259 aa11.21□□□□□ -0.61
HOXC9-202ENST00000504557 KCTD21Q4G0X4 260 aa11.21□□□□□ -0.61
HOXC9-202ENST00000504557 IDNKQ5T6J7 187 aa11.21□□□□□ -0.61
HOXC9-202ENST00000504557 SFXN4Q6P4A7 337 aa11.21□□□□□ -0.61
HOXC9-202ENST00000504557 TPRA1Q86W33 373 aa11.21□□□□□ -0.61
HOXC9-202ENST00000504557 OR4A4PQ8NGN8 299 aa11.21□□□□□ -0.61
HOXC9-202ENST00000504557 OR10J5Q8NHC4 309 aa11.21□□□□□ -0.61
HOXC9-202ENST00000504557 ABHD5Q8WTS1 349 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms