RNA–Protein interactions for RNA: ENST00000503659.5

RNF4-204, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 558 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-204ENST00000503659 CNTFRP26992 372 aa14.36□□□□□ -0.11
RNF4-204ENST00000503659 ACTBP60709 375 aa14.36□□□□□ -0.11
RNF4-204ENST00000503659 CFHR3Q02985 330 aa14.36□□□□□ -0.11
RNF4-204ENST00000503659 MMDQ15546 238 aa14.36□□□□□ -0.11
RNF4-204ENST00000503659 RPL39P5Q59GN2 51 aa14.36□□□□□ -0.11
RNF4-204ENST00000503659 C22orf42Q6IC83 251 aa14.36□□□□□ -0.11
RNF4-204ENST00000503659 COMMD1Q8N668 190 aa14.36□□□□□ -0.11
RNF4-204ENST00000503659 MRAPQ8TCY5 172 aa14.36□□□□□ -0.11
RNF4-204ENST00000503659 RCC1LQ96I51 464 aaKnown RBP14.36□□□□□ -0.11
RNF4-204ENST00000503659 CMSS1Q9BQ75 279 aaKnown RBP14.36□□□□□ -0.11
RNF4-204ENST00000503659 AGMATQ9BSE5 352 aa14.36□□□□□ -0.11
RNF4-204ENST00000503659 RAB22AQ9UL26 194 aa14.36□□□□□ -0.11
RNF4-204ENST00000503659 A0A0B4J203 849 aa14.35□□□□□ -0.11
RNF4-204ENST00000503659 IGKV1-6A0A0C4DH72 117 aa14.35□□□□□ -0.11
RNF4-204ENST00000503659 ITGB1BP1O14713 200 aa14.35□□□□□ -0.11
RNF4-204ENST00000503659 SLC2A2P11168 524 aaPredicted RBP14.35□□□□□ -0.11
RNF4-204ENST00000503659 RAB3BP20337 219 aa14.35□□□□□ -0.11
RNF4-204ENST00000503659 SOX6P35712 828 aa14.35□□□□□ -0.11
RNF4-204ENST00000503659 FOXB2Q5VYV0 432 aa14.35□□□□□ -0.11
RNF4-204ENST00000503659 LINC00482Q8N8I6 264 aa14.35□□□□□ -0.11
RNF4-204ENST00000503659 ABHD14BQ96IU4 210 aa14.35□□□□□ -0.11
RNF4-204ENST00000503659 Q9H521 79 aa14.35□□□□□ -0.11
RNF4-204ENST00000503659 ZFP57Q9NU63 452 aa14.35□□□□□ -0.11
RNF4-204ENST00000503659 PIPOXQ9P0Z9 390 aa14.35□□□□□ -0.11
RNF4-204ENST00000503659 MGAT4AQ9UM21 535 aa14.35□□□□□ -0.11
RNF4-204ENST00000503659 RAB29O14966 203 aa14.34□□□□□ -0.11
RNF4-204ENST00000503659 IGF1P05019 195 aa14.34□□□□□ -0.11
RNF4-204ENST00000503659 ZBTB25P24278 435 aa14.34□□□□□ -0.11
RNF4-204ENST00000503659 PSMB9P28065 219 aa14.34□□□□□ -0.11
RNF4-204ENST00000503659 SLC6A1P30531 599 aa14.34□□□□□ -0.11
RNF4-204ENST00000503659 RANBP1P43487 201 aa14.34□□□□□ -0.11
RNF4-204ENST00000503659 TEX38Q6PEX7 206 aa14.34□□□□□ -0.11
RNF4-204ENST00000503659 FAM131AQ6UXB0 335 aa14.34□□□□□ -0.11
RNF4-204ENST00000503659 C8orf86Q6ZUL3 223 aa14.34□□□□□ -0.11
RNF4-204ENST00000503659 FCGR1BQ92637 280 aa14.34□□□□□ -0.11
RNF4-204ENST00000503659 RAB3CQ96E17 227 aa14.34□□□□□ -0.11
RNF4-204ENST00000503659 C11orf54Q9H0W9 315 aaPredicted RBP14.34□□□□□ -0.11
RNF4-204ENST00000503659 AURKAIP1Q9NWT8 199 aaPredicted RBP14.34□□□□□ -0.11
RNF4-204ENST00000503659 ZNF107Q9UII5 783 aaPredicted RBP14.34□□□□□ -0.11
RNF4-204ENST00000503659 ZNF580Q9UK33 172 aa14.34□□□□□ -0.11
RNF4-204ENST00000503659 SMIM30A4D0T7 59 aa14.33□□□□□ -0.12
RNF4-204ENST00000503659 RAB27BO00194 218 aa14.33□□□□□ -0.12
RNF4-204ENST00000503659 MFNGO00587 321 aa14.33□□□□□ -0.12
RNF4-204ENST00000503659 NBR2O15453 112 aa14.33□□□□□ -0.12
RNF4-204ENST00000503659 RPLP1P05386 114 aaKnown RBP14.33□□□□□ -0.12
RNF4-204ENST00000503659 CT45A6P0DMU7 189 aa14.33□□□□□ -0.12
RNF4-204ENST00000503659 CT45A5P0DMU8 189 aa14.33□□□□□ -0.12
RNF4-204ENST00000503659 CT45A7P0DMV0 189 aa14.33□□□□□ -0.12
RNF4-204ENST00000503659 RAB6AP20340 208 aa14.33□□□□□ -0.12
RNF4-204ENST00000503659 CEACAM6P40199 344 aa14.33□□□□□ -0.12
RNF4-204ENST00000503659 THBS3P49746 956 aa14.33□□□□□ -0.12
RNF4-204ENST00000503659 PNLIPRP3Q17RR3 467 aa14.33□□□□□ -0.12
RNF4-204ENST00000503659 LCNL1Q6ZST4 164 aa14.33□□□□□ -0.12
RNF4-204ENST00000503659 MRPL41Q8IXM3 137 aaKnown RBP14.33□□□□□ -0.12
RNF4-204ENST00000503659 RNF152Q8N8N0 203 aa14.33□□□□□ -0.12
RNF4-204ENST00000503659 KLHL30-AS1Q8NEE0 82 aa14.33□□□□□ -0.12
RNF4-204ENST00000503659 PTX4Q96A99 478 aa14.33□□□□□ -0.12
RNF4-204ENST00000503659 GON7Q9BXV9 100 aa14.33□□□□□ -0.12
RNF4-204ENST00000503659 YTHDF1Q9BYJ9 559 aaKnown RBP14.33□□□□□ -0.12
RNF4-204ENST00000503659 TXNL4BQ9NX01 149 aaKnown RBP14.33□□□□□ -0.12
RNF4-204ENST00000503659 TRDCB7Z8K6 153 aa14.32□□□□□ -0.12
RNF4-204ENST00000503659 RRP9O43818 475 aaKnown RBP14.32□□□□□ -0.12
RNF4-204ENST00000503659 PROP1O75360 226 aa14.32□□□□□ -0.12
RNF4-204ENST00000503659 NDUFA3O95167 84 aa14.32□□□□□ -0.12
RNF4-204ENST00000503659 HLA-DRB1P01911 266 aa14.32□□□□□ -0.12
RNF4-204ENST00000503659 GNB3P16520 340 aa14.32□□□□□ -0.12
RNF4-204ENST00000503659 FGF9P31371 208 aaPredicted RBP14.32□□□□□ -0.12
RNF4-204ENST00000503659 FOXE3Q13461 319 aa14.32□□□□□ -0.12
RNF4-204ENST00000503659 C5orf64Q2M2E5 130 aa14.32□□□□□ -0.12
RNF4-204ENST00000503659 ZNF773Q6PK81 442 aa14.32□□□□□ -0.12
RNF4-204ENST00000503659 GLDNQ6ZMI3 551 aaPredicted RBP14.32□□□□□ -0.12
RNF4-204ENST00000503659 NPBQ8NG41 125 aa14.32□□□□□ -0.12
RNF4-204ENST00000503659 OR10R2Q8NGX6 335 aa14.32□□□□□ -0.12
RNF4-204ENST00000503659 EDARADDQ8WWZ3 215 aa14.32□□□□□ -0.12
RNF4-204ENST00000503659 GPR61Q9BZJ8 451 aa14.32□□□□□ -0.12
RNF4-204ENST00000503659 STUB1Q9UNE7 303 aa14.32□□□□□ -0.12
RNF4-204ENST00000503659 IGHV7-81A0A0B4J1V7 117 aa14.31□□□□□ -0.12
RNF4-204ENST00000503659 OR5H14A6NHG9 310 aa14.31□□□□□ -0.12
RNF4-204ENST00000503659 NUDT19A8MXV4 375 aa14.31□□□□□ -0.12
RNF4-204ENST00000503659 H0YJW9 148 aa14.31□□□□□ -0.12
RNF4-204ENST00000503659 HSPA12AO43301 675 aa14.31□□□□□ -0.12
RNF4-204ENST00000503659 IGHG4P01861 327 aa14.31□□□□□ -0.12
RNF4-204ENST00000503659 FCGR3AP08637 254 aa14.31□□□□□ -0.12
RNF4-204ENST00000503659 HIST1H1DP16402 221 aaKnown RBP14.31□□□□□ -0.12
RNF4-204ENST00000503659 VDAC1P21796 283 aa14.31□□□□□ -0.12
RNF4-204ENST00000503659 ZNF695Q8IW36 515 aa14.31□□□□□ -0.12
RNF4-204ENST00000503659 OR5AN1Q8NGI8 311 aa14.31□□□□□ -0.12
RNF4-204ENST00000503659 KCTD7Q96MP8 289 aa14.31□□□□□ -0.12
RNF4-204ENST00000503659 P2RX4Q99571 388 aa14.31□□□□□ -0.12
RNF4-204ENST00000503659 GHITMQ9H3K2 345 aa14.31□□□□□ -0.12
RNF4-204ENST00000503659 RDH8Q9NYR8 311 aa14.31□□□□□ -0.12
RNF4-204ENST00000503659 ATP6V0E1O15342 81 aa14.3□□□□□ -0.12
RNF4-204ENST00000503659 ELANEP08246 267 aa14.3□□□□□ -0.12
RNF4-204ENST00000503659 CD3GP09693 182 aa14.3□□□□□ -0.12
RNF4-204ENST00000503659 PSMB8P28062 276 aa14.3□□□□□ -0.12
RNF4-204ENST00000503659 CXorf66Q5JRM2 361 aaPredicted RBP14.3□□□□□ -0.12
RNF4-204ENST00000503659 OR4A4PQ8NGN8 299 aa14.3□□□□□ -0.12
RNF4-204ENST00000503659 RAX2Q96IS3 184 aa14.3□□□□□ -0.12
RNF4-204ENST00000503659 DUX3Q96PT4 197 aa14.3□□□□□ -0.12
RNF4-204ENST00000503659 CABLES2Q9BTV7 478 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms