RNA–Protein interactions for RNA: ENST00000497498.1

CBX3-208, Transcript of chromobox 3, humanhuman

TSL 2

Gene CBX3, Length 922 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-208ENST00000497498 DDIT4Q9NX09 232 aa1.56□□□□□ -2.16
CBX3-208ENST00000497498 TMEM216Q9P0N5 145 aa1.56□□□□□ -2.16
CBX3-208ENST00000497498 CLEC2DQ9UHP7 191 aa1.56□□□□□ -2.16
CBX3-208ENST00000497498 OR52A1Q9UKL2 312 aa1.56□□□□□ -2.16
CBX3-208ENST00000497498 RNF11Q9Y3C5 154 aa1.56□□□□□ -2.16
CBX3-208ENST00000497498 PPIL1Q9Y3C6 166 aa1.56□□□□□ -2.16
CBX3-208ENST00000497498 HSPB11Q9Y547 144 aa1.56□□□□□ -2.16
CBX3-208ENST00000497498 PTPRJQ12913 1337 aa1.56□□□□□ -2.16
CBX3-208ENST00000497498 NAV1Q8NEY1 1877 aa1.56□□□□□ -2.16
CBX3-208ENST00000497498 SDK1Q7Z5N4 2213 aa1.55□□□□□ -2.16
CBX3-208ENST00000497498 SIPA1L1O43166 1804 aa1.55□□□□□ -2.16
CBX3-208ENST00000497498 ATAD5Q96QE3 1844 aa1.55□□□□□ -2.16
CBX3-208ENST00000497498 DENND4AQ7Z401 1863 aa1.55□□□□□ -2.16
CBX3-208ENST00000497498 SMIM26A0A096LP01 95 aa1.55□□□□□ -2.16
CBX3-208ENST00000497498 IGLV1-36A0A0B4J1U3 117 aa1.55□□□□□ -2.16
CBX3-208ENST00000497498 TRAV39A0A0B4J263 110 aa1.55□□□□□ -2.16
CBX3-208ENST00000497498 A0A0G2JMP0 313 aa1.55□□□□□ -2.16
CBX3-208ENST00000497498 A0A0X1KG70 313 aa1.55□□□□□ -2.16
CBX3-208ENST00000497498 A0A1B0GVX0 72 aa1.55□□□□□ -2.16
CBX3-208ENST00000497498 SERTM2A0A1B0GWG4 89 aa1.55□□□□□ -2.16
CBX3-208ENST00000497498 TCRBV3S1A0A5B6 114 aa1.55□□□□□ -2.16
CBX3-208ENST00000497498 EFCAB9A8MZ26 197 aa1.55□□□□□ -2.16
CBX3-208ENST00000497498 DISC1C4P0D8 188 aa1.55□□□□□ -2.16
CBX3-208ENST00000497498 D6RAR5 112 aa1.55□□□□□ -2.16
CBX3-208ENST00000497498 H7C417 338 aa1.55□□□□□ -2.16
CBX3-208ENST00000497498 K7EMT4 169 aa1.55□□□□□ -2.16
CBX3-208ENST00000497498 K7ERU9 68 aa1.55□□□□□ -2.16
CBX3-208ENST00000497498 M0QYV0 167 aa1.55□□□□□ -2.16
CBX3-208ENST00000497498 M0R143 59 aa1.55□□□□□ -2.16
CBX3-208ENST00000497498 SIRPB1O00241 398 aa1.55□□□□□ -2.16
CBX3-208ENST00000497498 GABRPO00591 440 aa1.55□□□□□ -2.16
CBX3-208ENST00000497498 CDIPTO14735 213 aa1.55□□□□□ -2.16
CBX3-208ENST00000497498 PDCD5O14737 125 aa1.55□□□□□ -2.16
CBX3-208ENST00000497498 DLEU1O43261 78 aa1.55□□□□□ -2.16
CBX3-208ENST00000497498 B4GALT5O43286 388 aa1.55□□□□□ -2.16
CBX3-208ENST00000497498 CHST10O43529 356 aa1.55□□□□□ -2.16
CBX3-208ENST00000497498 KDELR3O43731 214 aa1.55□□□□□ -2.16
CBX3-208ENST00000497498 SLC19A2O60779 497 aa1.55□□□□□ -2.16
CBX3-208ENST00000497498 NDUFS6O75380 124 aaKnown RBP1.55□□□□□ -2.16
CBX3-208ENST00000497498 RP2O75695 350 aa1.55□□□□□ -2.16
CBX3-208ENST00000497498 ZMPSTE24O75844 475 aa1.55□□□□□ -2.16
CBX3-208ENST00000497498 AQP8O94778 261 aa1.55□□□□□ -2.16
CBX3-208ENST00000497498 IFNA21P01568 189 aa1.55□□□□□ -2.16
CBX3-208ENST00000497498 SERPINE1P05121 402 aa1.55□□□□□ -2.16
CBX3-208ENST00000497498 CD2P06729 351 aa1.55□□□□□ -2.16
CBX3-208ENST00000497498 GP1BAP07359 652 aa1.55□□□□□ -2.16
CBX3-208ENST00000497498 UBBP0CG47 229 aa1.55□□□□□ -2.16
CBX3-208ENST00000497498 UBCP0CG48 685 aaKnown RBP1.55□□□□□ -2.16
CBX3-208ENST00000497498 IFI30P13284 250 aa1.55□□□□□ -2.16
CBX3-208ENST00000497498 FGF7P21781 194 aa1.55□□□□□ -2.16
CBX3-208ENST00000497498 RPS3P23396 243 aaKnown RBP eCLIP1.55□□□□□ -2.16
CBX3-208ENST00000497498 CRHBPP24387 322 aa1.55□□□□□ -2.16
CBX3-208ENST00000497498 KDELR1P24390 212 aa1.55□□□□□ -2.16
CBX3-208ENST00000497498 F2RP25116 425 aa1.55□□□□□ -2.16
CBX3-208ENST00000497498 PSMB6P28072 239 aa1.55□□□□□ -2.16
CBX3-208ENST00000497498 HTR2CP28335 458 aa1.55□□□□□ -2.16
CBX3-208ENST00000497498 HSD11B1P28845 292 aa1.55□□□□□ -2.16
CBX3-208ENST00000497498 DDTP30046 118 aa1.55□□□□□ -2.16
CBX3-208ENST00000497498 OR1E1P30953 314 aa1.55□□□□□ -2.16
CBX3-208ENST00000497498 LCN1P31025 176 aa1.55□□□□□ -2.16
CBX3-208ENST00000497498 TGFBR2P37173 567 aa1.55□□□□□ -2.16
CBX3-208ENST00000497498 CSKP41240 450 aa1.55□□□□□ -2.16
CBX3-208ENST00000497498 GABRA4P48169 554 aa1.55□□□□□ -2.16
CBX3-208ENST00000497498 RAB8AP61006 207 aa1.55□□□□□ -2.16
CBX3-208ENST00000497498 RAB10P61026 200 aa1.55□□□□□ -2.16
CBX3-208ENST00000497498 NCS1P62166 190 aa1.55□□□□□ -2.16
CBX3-208ENST00000497498 RANP62826 216 aaKnown RBP1.55□□□□□ -2.16
CBX3-208ENST00000497498 UBA52P62987 128 aaKnown RBP1.55□□□□□ -2.16
CBX3-208ENST00000497498 PSPHP78330 225 aa1.55□□□□□ -2.16
CBX3-208ENST00000497498 ADARB1P78563 741 aaKnown RBP1.55□□□□□ -2.16
CBX3-208ENST00000497498 TFAMQ00059 246 aaKnown RBP1.55□□□□□ -2.16
CBX3-208ENST00000497498 TAF1AQ15573 450 aaPredicted RBP1.55□□□□□ -2.16
CBX3-208ENST00000497498 OR7A5Q15622 319 aa1.55□□□□□ -2.16
CBX3-208ENST00000497498 NEDD8Q15843 81 aa1.55□□□□□ -2.16
CBX3-208ENST00000497498 RAB11BQ15907 218 aa1.55□□□□□ -2.16
CBX3-208ENST00000497498 PSG3Q16557 428 aa1.55□□□□□ -2.16
CBX3-208ENST00000497498 BSXQ3C1V8 233 aa1.55□□□□□ -2.16
CBX3-208ENST00000497498 TMEM255AQ5JRV8 349 aa1.55□□□□□ -2.16
CBX3-208ENST00000497498 IDNKQ5T6J7 187 aa1.55□□□□□ -2.16
CBX3-208ENST00000497498 SYT6Q5T7P8 510 aaPredicted RBP1.55□□□□□ -2.16
CBX3-208ENST00000497498 TRIQKQ629K1 86 aa1.55□□□□□ -2.16
CBX3-208ENST00000497498 FAM45BPQ6NSW5 357 aa1.55□□□□□ -2.16
CBX3-208ENST00000497498 FBXW12Q6X9E4 464 aa1.55□□□□□ -2.16
CBX3-208ENST00000497498 TMPRSS11AQ6ZMR5 421 aa1.55□□□□□ -2.16
CBX3-208ENST00000497498 PAGE2Q7Z2X7 111 aa1.55□□□□□ -2.16
CBX3-208ENST00000497498 HMGN2P46Q86SG4 172 aa1.55□□□□□ -2.16
CBX3-208ENST00000497498 FAM71AQ8IYT1 594 aa1.55□□□□□ -2.16
CBX3-208ENST00000497498 DAW1Q8N136 415 aa1.55□□□□□ -2.16
CBX3-208ENST00000497498 C9orf62Q8N4C0 152 aa1.55□□□□□ -2.16
CBX3-208ENST00000497498 ACBD7Q8N6N7 88 aa1.55□□□□□ -2.16
CBX3-208ENST00000497498 YIPF7Q8N8F6 280 aa1.55□□□□□ -2.16
CBX3-208ENST00000497498 OR2M7Q8NG81 312 aa1.55□□□□□ -2.16
CBX3-208ENST00000497498 OR7G2Q8NG99 324 aa1.55□□□□□ -2.16
CBX3-208ENST00000497498 OR51L1Q8NGJ5 315 aa1.55□□□□□ -2.16
CBX3-208ENST00000497498 OR9Q1Q8NGQ5 310 aa1.55□□□□□ -2.16
CBX3-208ENST00000497498 OR10J6PQ8NGY7 276 aa1.55□□□□□ -2.16
CBX3-208ENST00000497498 COQ8AQ8NI60 647 aa1.55□□□□□ -2.16
CBX3-208ENST00000497498 CA5BP1Q8WTZ4 195 aa1.55□□□□□ -2.16
CBX3-208ENST00000497498 CYGBQ8WWM9 190 aa1.55□□□□□ -2.16
CBX3-208ENST00000497498 LCN9Q8WX39 176 aa1.55□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms