RNA–Protein interactions for RNA: ENST00000496458.1

SF3B1-212, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 475 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-212ENST00000496458 DTYMKP23919 212 aa3.26□□□□□ -1.89
SF3B1-212ENST00000496458 PFN2P35080 140 aa3.26□□□□□ -1.89
SF3B1-212ENST00000496458 OR12D2P58182 307 aa3.26□□□□□ -1.89
SF3B1-212ENST00000496458 RAB2AP61019 212 aa3.26□□□□□ -1.89
SF3B1-212ENST00000496458 RAB5BP61020 215 aa3.26□□□□□ -1.89
SF3B1-212ENST00000496458 PKIAP61925 76 aa3.26□□□□□ -1.89
SF3B1-212ENST00000496458 AESQ08117 197 aa3.26□□□□□ -1.89
SF3B1-212ENST00000496458 ZNF763Q0D2J5 394 aa3.26□□□□□ -1.89
SF3B1-212ENST00000496458 SRSF6Q13247 344 aaKnown RBP3.26□□□□□ -1.89
SF3B1-212ENST00000496458 AQP6Q13520 282 aa3.26□□□□□ -1.89
SF3B1-212ENST00000496458 ATP6AP1Q15904 470 aa3.26□□□□□ -1.89
SF3B1-212ENST00000496458 CEACAM21Q3KPI0 293 aa3.26□□□□□ -1.89
SF3B1-212ENST00000496458 SPIN4Q56A73 249 aa3.26□□□□□ -1.89
SF3B1-212ENST00000496458 CASC10Q5T4H9 136 aa3.26□□□□□ -1.89
SF3B1-212ENST00000496458 AVPI1Q5T686 147 aa3.26□□□□□ -1.89
SF3B1-212ENST00000496458 LRRN1Q6UXK5 716 aa3.26□□□□□ -1.89
SF3B1-212ENST00000496458 SPNS3Q6ZMD2 512 aa3.26□□□□□ -1.89
SF3B1-212ENST00000496458 SLC16A13Q7RTY0 426 aa3.26□□□□□ -1.89
SF3B1-212ENST00000496458 FAM19A5Q7Z5A7 132 aaPredicted RBP3.26□□□□□ -1.89
SF3B1-212ENST00000496458 TRAPPC5Q8IUR0 188 aa3.26□□□□□ -1.89
SF3B1-212ENST00000496458 FAM71AQ8IYT1 594 aa3.26□□□□□ -1.89
SF3B1-212ENST00000496458 BLIDQ8IZY5 108 aa3.26□□□□□ -1.89
SF3B1-212ENST00000496458 YIPF7Q8N8F6 280 aa3.26□□□□□ -1.89
SF3B1-212ENST00000496458 OR4K17Q8NGC6 315 aa3.26□□□□□ -1.89
SF3B1-212ENST00000496458 OR4K15Q8NH41 348 aa3.26□□□□□ -1.89
SF3B1-212ENST00000496458 OR51Q1Q8NH59 317 aa3.26□□□□□ -1.89
SF3B1-212ENST00000496458 MCFD2Q8NI22 146 aa3.26□□□□□ -1.89
SF3B1-212ENST00000496458 ZNF721Q8TF20 911 aa3.26□□□□□ -1.89
SF3B1-212ENST00000496458 AP3S1Q92572 193 aa3.26□□□□□ -1.89
SF3B1-212ENST00000496458 TMEM203Q969S6 136 aa3.26□□□□□ -1.89
SF3B1-212ENST00000496458 L3HYPDHQ96EM0 354 aa3.26□□□□□ -1.89
SF3B1-212ENST00000496458 NARS2Q96I59 477 aaKnown RBP3.26□□□□□ -1.89
SF3B1-212ENST00000496458 FAM210BQ96KR6 192 aa3.26□□□□□ -1.89
SF3B1-212ENST00000496458 Q96MT0 163 aa3.26□□□□□ -1.89
SF3B1-212ENST00000496458 LINC00052Q96N35 136 aa3.26□□□□□ -1.89
SF3B1-212ENST00000496458 OR2M2Q96R28 347 aa3.26□□□□□ -1.89
SF3B1-212ENST00000496458 PRRT1Q99946 306 aa3.26□□□□□ -1.89
SF3B1-212ENST00000496458 ZNF2Q9BSG1 426 aaPredicted RBP3.26□□□□□ -1.89
SF3B1-212ENST00000496458 UGT2B28Q9BY64 529 aa3.26□□□□□ -1.89
SF3B1-212ENST00000496458 ZNF436Q9C0F3 470 aaPredicted RBP3.26□□□□□ -1.89
SF3B1-212ENST00000496458 SLIRPQ9GZT3 109 aaKnown RBP3.26□□□□□ -1.89
SF3B1-212ENST00000496458 XCL2Q9UBD3 114 aa3.26□□□□□ -1.89
SF3B1-212ENST00000496458 SLC7A11Q9UPY5 501 aa3.26□□□□□ -1.89
SF3B1-212ENST00000496458 ZNF257Q9Y2Q1 563 aa3.26□□□□□ -1.89
SF3B1-212ENST00000496458 HSPB11Q9Y547 144 aa3.26□□□□□ -1.89
SF3B1-212ENST00000496458 KCNE3Q9Y6H6 103 aa3.26□□□□□ -1.89
SF3B1-212ENST00000496458 A0A0G2JMZ2 1700 aa3.26□□□□□ -1.89
SF3B1-212ENST00000496458 BRWD1Q9NSI6 2320 aa3.26□□□□□ -1.89
SF3B1-212ENST00000496458 NFASCO94856 1347 aa3.25□□□□□ -1.89
SF3B1-212ENST00000496458 LCTP09848 1927 aa3.25□□□□□ -1.89
SF3B1-212ENST00000496458 IGHV3OR16-13A0A075B7E8 117 aa3.25□□□□□ -1.89
SF3B1-212ENST00000496458 SPRR5A0A1B0GTR4 108 aa3.25□□□□□ -1.89
SF3B1-212ENST00000496458 TINCRA0A1B0GVN0 87 aa3.25□□□□□ -1.89
SF3B1-212ENST00000496458 LRCOL1A6NCL2 159 aa3.25□□□□□ -1.89
SF3B1-212ENST00000496458 F5H5T6 163 aa3.25□□□□□ -1.89
SF3B1-212ENST00000496458 DLEU1O43261 78 aa3.25□□□□□ -1.89
SF3B1-212ENST00000496458 FOXH1O75593 365 aa3.25□□□□□ -1.89
SF3B1-212ENST00000496458 GLSO94925 669 aaPredicted RBP3.25□□□□□ -1.89
SF3B1-212ENST00000496458 GADD45GO95257 159 aa3.25□□□□□ -1.89
SF3B1-212ENST00000496458 C6orf47O95873 294 aa3.25□□□□□ -1.89
SF3B1-212ENST00000496458 PPBPP02775 128 aa3.25□□□□□ -1.89
SF3B1-212ENST00000496458 BCHEP06276 602 aa3.25□□□□□ -1.89
SF3B1-212ENST00000496458 METTL15P1P0C7V9 234 aa3.25□□□□□ -1.89
SF3B1-212ENST00000496458 RAB3BP20337 219 aa3.25□□□□□ -1.89
SF3B1-212ENST00000496458 MPIP34949 423 aa3.25□□□□□ -1.89
SF3B1-212ENST00000496458 PMELP40967 661 aa3.25□□□□□ -1.89
SF3B1-212ENST00000496458 PPICP45877 212 aa3.25□□□□□ -1.89
SF3B1-212ENST00000496458 RANP62826 216 aaKnown RBP3.25□□□□□ -1.89
SF3B1-212ENST00000496458 RAP1AP62834 184 aa3.25□□□□□ -1.89
SF3B1-212ENST00000496458 RBX1P62877 108 aa3.25□□□□□ -1.89
SF3B1-212ENST00000496458 SLC35A1P78382 337 aa3.25□□□□□ -1.89
SF3B1-212ENST00000496458 TNFRSF9Q07011 255 aa3.25□□□□□ -1.89
SF3B1-212ENST00000496458 SHHQ15465 462 aa3.25□□□□□ -1.89
SF3B1-212ENST00000496458 UBE2SQ16763 222 aa3.25□□□□□ -1.89
SF3B1-212ENST00000496458 LRRC26Q2I0M4 334 aa3.25□□□□□ -1.89
SF3B1-212ENST00000496458 ZNF404Q494X3 552 aa3.25□□□□□ -1.89
SF3B1-212ENST00000496458 SPIN3Q5JUX0 258 aa3.25□□□□□ -1.89
SF3B1-212ENST00000496458 NXNL2Q5VZ03 156 aa3.25□□□□□ -1.89
SF3B1-212ENST00000496458 XAF1Q6GPH4 301 aa3.25□□□□□ -1.89
SF3B1-212ENST00000496458 OR2T5Q6IEZ7 315 aa3.25□□□□□ -1.89
SF3B1-212ENST00000496458 CASP12Q6UXS9 341 aa3.25□□□□□ -1.89
SF3B1-212ENST00000496458 FAM183BPQ6ZVS7 135 aa3.25□□□□□ -1.89
SF3B1-212ENST00000496458 STRADAQ7RTN6 431 aa3.25□□□□□ -1.89
SF3B1-212ENST00000496458 MRPL55Q7Z7F7 128 aaKnown RBP3.25□□□□□ -1.89
SF3B1-212ENST00000496458 PRSS58Q8IYP2 241 aa3.25□□□□□ -1.89
SF3B1-212ENST00000496458 STK40Q8N2I9 435 aa3.25□□□□□ -1.89
SF3B1-212ENST00000496458 ZADH2Q8N4Q0 377 aa3.25□□□□□ -1.89
SF3B1-212ENST00000496458 CBR4Q8N4T8 237 aa3.25□□□□□ -1.89
SF3B1-212ENST00000496458 NPWQ8N729 165 aa3.25□□□□□ -1.89
SF3B1-212ENST00000496458 OR2T29Q8NH02 315 aa3.25□□□□□ -1.89
SF3B1-212ENST00000496458 DNAJC19Q96DA6 116 aa3.25□□□□□ -1.89
SF3B1-212ENST00000496458 ZMYND19Q96E35 227 aaPredicted RBP3.25□□□□□ -1.89
SF3B1-212ENST00000496458 MRAP2Q96G30 205 aa3.25□□□□□ -1.89
SF3B1-212ENST00000496458 RBP7Q96R05 134 aa3.25□□□□□ -1.89
SF3B1-212ENST00000496458 P2RX4Q99571 388 aa3.25□□□□□ -1.89
SF3B1-212ENST00000496458 EBNA1BP2Q99848 306 aaKnown RBP3.25□□□□□ -1.89
SF3B1-212ENST00000496458 NRIP2Q9BQI9 281 aa3.25□□□□□ -1.89
SF3B1-212ENST00000496458 RTBDNQ9BSG5 229 aaPredicted RBP3.25□□□□□ -1.89
SF3B1-212ENST00000496458 GGACTQ9BVM4 153 aa3.25□□□□□ -1.89
SF3B1-212ENST00000496458 CDCA4Q9BXL8 241 aa3.25□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms