RNA–Protein interactions for RNA: ENST00000494800.1

HDAC4-211, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 451 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-211ENST00000494800 AP4M1O00189 453 aa13.98□□□□□ -0.17
HDAC4-211ENST00000494800 RRP9O43818 475 aaKnown RBP13.98□□□□□ -0.17
HDAC4-211ENST00000494800 SCTP09683 121 aa13.98□□□□□ -0.17
HDAC4-211ENST00000494800 PF4V1P10720 104 aa13.98□□□□□ -0.17
HDAC4-211ENST00000494800 SLC2A2P11168 524 aaPredicted RBP13.98□□□□□ -0.17
HDAC4-211ENST00000494800 GNB3P16520 340 aa13.98□□□□□ -0.17
HDAC4-211ENST00000494800 OR3A3P47888 321 aa13.98□□□□□ -0.17
HDAC4-211ENST00000494800 MMDQ15546 238 aa13.98□□□□□ -0.17
HDAC4-211ENST00000494800 MOGAT2Q3SYC2 334 aa13.98□□□□□ -0.17
HDAC4-211ENST00000494800 SFXN4Q6P4A7 337 aa13.98□□□□□ -0.17
HDAC4-211ENST00000494800 NR2C2APQ86WQ0 139 aa13.98□□□□□ -0.17
HDAC4-211ENST00000494800 Q8N9W7 124 aa13.98□□□□□ -0.17
HDAC4-211ENST00000494800 OR4A4PQ8NGN8 299 aa13.98□□□□□ -0.17
HDAC4-211ENST00000494800 PHF21AQ96BD5 680 aa13.98□□□□□ -0.17
HDAC4-211ENST00000494800 NABP2Q9BQ15 211 aa13.98□□□□□ -0.17
HDAC4-211ENST00000494800 ZNF251Q9BRH9 671 aa13.98□□□□□ -0.17
HDAC4-211ENST00000494800 MRPL20Q9BYC9 149 aaKnown RBP13.98□□□□□ -0.17
HDAC4-211ENST00000494800 A0A1W2PRX2 142 aa13.97□□□□□ -0.17
HDAC4-211ENST00000494800 RAB27BO00194 218 aa13.97□□□□□ -0.17
HDAC4-211ENST00000494800 MFNGO00587 321 aa13.97□□□□□ -0.17
HDAC4-211ENST00000494800 FABP7O15540 132 aa13.97□□□□□ -0.17
HDAC4-211ENST00000494800 FCGR3AP08637 254 aa13.97□□□□□ -0.17
HDAC4-211ENST00000494800 SDC2P34741 201 aa13.97□□□□□ -0.17
HDAC4-211ENST00000494800 SOX6P35712 828 aa13.97□□□□□ -0.17
HDAC4-211ENST00000494800 GPR12P47775 334 aa13.97□□□□□ -0.17
HDAC4-211ENST00000494800 COMMD1Q8N668 190 aa13.97□□□□□ -0.17
HDAC4-211ENST00000494800 TSPAN14Q8NG11 270 aa13.97□□□□□ -0.17
HDAC4-211ENST00000494800 OR1A1Q9P1Q5 309 aa13.97□□□□□ -0.17
HDAC4-211ENST00000494800 ZNF221Q9UK13 617 aa13.97□□□□□ -0.17
HDAC4-211ENST00000494800 KCNK7Q9Y2U2 307 aa13.97□□□□□ -0.17
HDAC4-211ENST00000494800 OR5H14A6NHG9 310 aa13.96□□□□□ -0.17
HDAC4-211ENST00000494800 DIRAS3O95661 229 aa13.96□□□□□ -0.17
HDAC4-211ENST00000494800 MC5RP33032 325 aa13.96□□□□□ -0.17
HDAC4-211ENST00000494800 SCAND1P57086 179 aa13.96□□□□□ -0.17
HDAC4-211ENST00000494800 ACTBP60709 375 aa13.96□□□□□ -0.17
HDAC4-211ENST00000494800 MXD1Q05195 221 aa13.96□□□□□ -0.17
HDAC4-211ENST00000494800 STPG2Q8N412 459 aa13.96□□□□□ -0.17
HDAC4-211ENST00000494800 OR10J5Q8NHC4 309 aa13.96□□□□□ -0.17
HDAC4-211ENST00000494800 C11orf54Q9H0W9 315 aaPredicted RBP13.96□□□□□ -0.17
HDAC4-211ENST00000494800 PLSCR3Q9NRY6 295 aa13.96□□□□□ -0.17
HDAC4-211ENST00000494800 KIAA1456Q9P272 454 aa13.96□□□□□ -0.17
HDAC4-211ENST00000494800 BET1O15155 118 aa13.95□□□□□ -0.18
HDAC4-211ENST00000494800 TMEM127O75204 238 aa13.95□□□□□ -0.18
HDAC4-211ENST00000494800 F2RL1P55085 397 aa13.95□□□□□ -0.18
HDAC4-211ENST00000494800 DEFA6Q01524 100 aa13.95□□□□□ -0.18
HDAC4-211ENST00000494800 ZNF329Q86UD4 541 aa13.95□□□□□ -0.18
HDAC4-211ENST00000494800 FAM71E2Q8N5Q1 922 aa13.95□□□□□ -0.18
HDAC4-211ENST00000494800 ABHD14BQ96IU4 210 aa13.95□□□□□ -0.18
HDAC4-211ENST00000494800 NOL4LQ96MY1 436 aaPredicted RBP13.95□□□□□ -0.18
HDAC4-211ENST00000494800 RDH8Q9NYR8 311 aa13.95□□□□□ -0.18
HDAC4-211ENST00000494800 ETV7Q9Y603 341 aa13.95□□□□□ -0.18
HDAC4-211ENST00000494800 ADARB2-AS1A8MUL3 147 aa13.94□□□□□ -0.18
HDAC4-211ENST00000494800 H7C2Y5 167 aa13.94□□□□□ -0.18
HDAC4-211ENST00000494800 NBR2O15453 112 aa13.94□□□□□ -0.18
HDAC4-211ENST00000494800 PF4P02776 101 aa13.94□□□□□ -0.18
HDAC4-211ENST00000494800 DTYMKP23919 212 aa13.94□□□□□ -0.18
HDAC4-211ENST00000494800 PITPNAQ00169 270 aa13.94□□□□□ -0.18
HDAC4-211ENST00000494800 SRSF7Q16629 238 aaKnown RBP eCLIP13.94□□□□□ -0.18
HDAC4-211ENST00000494800 CDNFQ49AH0 187 aa13.94□□□□□ -0.18
HDAC4-211ENST00000494800 RPL39P5Q59GN2 51 aa13.94□□□□□ -0.18
HDAC4-211ENST00000494800 TCTEX1D4Q5JR98 221 aa13.94□□□□□ -0.18
HDAC4-211ENST00000494800 LGALS14Q8TCE9 139 aa13.94□□□□□ -0.18
HDAC4-211ENST00000494800 GINS4Q9BRT9 223 aa13.94□□□□□ -0.18
HDAC4-211ENST00000494800 AGMATQ9BSE5 352 aa13.94□□□□□ -0.18
HDAC4-211ENST00000494800 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.94□□□□□ -0.18
HDAC4-211ENST00000494800 ZNF107Q9UII5 783 aaPredicted RBP13.94□□□□□ -0.18
HDAC4-211ENST00000494800 LINC00527Q9UJ94 153 aa13.94□□□□□ -0.18
HDAC4-211ENST00000494800 RBBP9O75884 186 aa13.93□□□□□ -0.18
HDAC4-211ENST00000494800 GSTP1P09211 210 aaKnown RBP13.93□□□□□ -0.18
HDAC4-211ENST00000494800 OR5H8P0DN80 308 aa13.93□□□□□ -0.18
HDAC4-211ENST00000494800 SNRPBP14678 240 aaKnown RBP13.93□□□□□ -0.18
HDAC4-211ENST00000494800 VDAC1P21796 283 aa13.93□□□□□ -0.18
HDAC4-211ENST00000494800 IDNKQ5T6J7 187 aa13.93□□□□□ -0.18
HDAC4-211ENST00000494800 HACD4Q5VWC8 232 aa13.93□□□□□ -0.18
HDAC4-211ENST00000494800 TEX38Q6PEX7 206 aa13.93□□□□□ -0.18
HDAC4-211ENST00000494800 C10orf99Q6UWK7 81 aa13.93□□□□□ -0.18
HDAC4-211ENST00000494800 FAM131AQ6UXB0 335 aa13.93□□□□□ -0.18
HDAC4-211ENST00000494800 CROCCP3Q8IVE0 287 aa13.93□□□□□ -0.18
HDAC4-211ENST00000494800 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.93□□□□□ -0.18
HDAC4-211ENST00000494800 CABLES2Q9BTV7 478 aa13.93□□□□□ -0.18
HDAC4-211ENST00000494800 PARP12Q9H0J9 701 aaKnown RBP13.93□□□□□ -0.18
HDAC4-211ENST00000494800 ZFP57Q9NU63 452 aa13.93□□□□□ -0.18
HDAC4-211ENST00000494800 RHBDL2Q9NX52 303 aa13.93□□□□□ -0.18
HDAC4-211ENST00000494800 RNF150Q9ULK6 438 aa13.93□□□□□ -0.18
HDAC4-211ENST00000494800 WASHC3Q9Y3C0 194 aa13.93□□□□□ -0.18
HDAC4-211ENST00000494800 RBM7Q9Y580 266 aaKnown RBP13.93□□□□□ -0.18
HDAC4-211ENST00000494800 VWFP04275 2813 aa13.93□□□□□ -0.18
HDAC4-211ENST00000494800 MEGF8Q7Z7M0 2845 aa13.92□□□□□ -0.18
HDAC4-211ENST00000494800 TRBV6-7A0A0A0MS04 114 aa13.92□□□□□ -0.18
HDAC4-211ENST00000494800 IGKV1-6A0A0C4DH72 117 aa13.92□□□□□ -0.18
HDAC4-211ENST00000494800 AIREO43918 545 aa13.92□□□□□ -0.18
HDAC4-211ENST00000494800 GSTT2P0CG29 244 aa13.92□□□□□ -0.18
HDAC4-211ENST00000494800 GSTT2BP0CG30 244 aa13.92□□□□□ -0.18
HDAC4-211ENST00000494800 CT45A6P0DMU7 189 aa13.92□□□□□ -0.18
HDAC4-211ENST00000494800 CT45A5P0DMU8 189 aa13.92□□□□□ -0.18
HDAC4-211ENST00000494800 CT45A7P0DMV0 189 aa13.92□□□□□ -0.18
HDAC4-211ENST00000494800 SLC6A1P30531 599 aa13.92□□□□□ -0.18
HDAC4-211ENST00000494800 GNG2P59768 71 aa13.92□□□□□ -0.18
HDAC4-211ENST00000494800 PNLIPRP3Q17RR3 467 aa13.92□□□□□ -0.18
HDAC4-211ENST00000494800 IGSF11Q5DX21 431 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms