RNA–Protein interactions for RNA: ENST00000493916.1

SNIP1-203, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 4

Gene SNIP1, Length 546 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-203ENST00000493916 ARL6IP1Q15041 203 aa17.9■□□□□ 0.46
SNIP1-203ENST00000493916 SLC35E3Q7Z769 313 aa17.9■□□□□ 0.46
SNIP1-203ENST00000493916 FAM71E2Q8N5Q1 922 aa17.9■□□□□ 0.46
SNIP1-203ENST00000493916 TSPAN14Q8NG11 270 aa17.9■□□□□ 0.46
SNIP1-203ENST00000493916 OR4A4PQ8NGN8 299 aa17.9■□□□□ 0.46
SNIP1-203ENST00000493916 CHPT1Q8WUD6 406 aa17.9■□□□□ 0.46
SNIP1-203ENST00000493916 ZNF251Q9BRH9 671 aa17.9■□□□□ 0.46
SNIP1-203ENST00000493916 AGMATQ9BSE5 352 aa17.9■□□□□ 0.46
SNIP1-203ENST00000493916 ATG5Q9H1Y0 275 aa17.9■□□□□ 0.46
SNIP1-203ENST00000493916 PSMB11A5LHX3 300 aa17.89■□□□□ 0.45
SNIP1-203ENST00000493916 DIRAS3O95661 229 aa17.89■□□□□ 0.45
SNIP1-203ENST00000493916 GPR12P47775 334 aa17.89■□□□□ 0.45
SNIP1-203ENST00000493916 SERPINB10P48595 397 aa17.89■□□□□ 0.45
SNIP1-203ENST00000493916 KIR2DS1Q14954 304 aa17.89■□□□□ 0.45
SNIP1-203ENST00000493916 OR4F17Q8NGA8 305 aa17.89■□□□□ 0.45
SNIP1-203ENST00000493916 OR4F4Q96R69 305 aa17.89■□□□□ 0.45
SNIP1-203ENST00000493916 CENPOQ9BU64 300 aa17.89■□□□□ 0.45
SNIP1-203ENST00000493916 C11orf54Q9H0W9 315 aaPredicted RBP17.89■□□□□ 0.45
SNIP1-203ENST00000493916 RNF167Q9H6Y7 350 aa17.89■□□□□ 0.45
SNIP1-203ENST00000493916 VCX3AQ9NNX9 186 aa17.89■□□□□ 0.45
SNIP1-203ENST00000493916 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP17.89■□□□□ 0.45
SNIP1-203ENST00000493916 FABP7O15540 132 aa17.88■□□□□ 0.45
SNIP1-203ENST00000493916 SCGNO76038 276 aa17.88■□□□□ 0.45
SNIP1-203ENST00000493916 F2RL1P55085 397 aa17.88■□□□□ 0.45
SNIP1-203ENST00000493916 SCAND1P57086 179 aa17.88■□□□□ 0.45
SNIP1-203ENST00000493916 SRSF7Q16629 238 aaKnown RBP eCLIP17.88■□□□□ 0.45
SNIP1-203ENST00000493916 TIMM50Q3ZCQ8 353 aa17.88■□□□□ 0.45
SNIP1-203ENST00000493916 C10orf99Q6UWK7 81 aa17.88■□□□□ 0.45
SNIP1-203ENST00000493916 FOXRED2Q8IWF2 684 aa17.88■□□□□ 0.45
SNIP1-203ENST00000493916 RASL11BQ9BPW5 248 aa17.88■□□□□ 0.45
SNIP1-203ENST00000493916 CABLES2Q9BTV7 478 aa17.88■□□□□ 0.45
SNIP1-203ENST00000493916 TOLLIPQ9H0E2 274 aa17.88■□□□□ 0.45
SNIP1-203ENST00000493916 TSSC4Q9Y5U2 329 aaPredicted RBP17.88■□□□□ 0.45
SNIP1-203ENST00000493916 A0A075B6Q4 140 aa17.87■□□□□ 0.45
SNIP1-203ENST00000493916 TCRBV4S1A1TA0A5B7 111 aa17.87■□□□□ 0.45
SNIP1-203ENST00000493916 KCNAB3O43448 404 aa17.87■□□□□ 0.45
SNIP1-203ENST00000493916 CLEC2LP0C7M8 214 aa17.87■□□□□ 0.45
SNIP1-203ENST00000493916 SNRPBP14678 240 aaKnown RBP17.87■□□□□ 0.45
SNIP1-203ENST00000493916 RPL39P5Q59GN2 51 aa17.87■□□□□ 0.45
SNIP1-203ENST00000493916 Q6ZS49 121 aa17.87■□□□□ 0.45
SNIP1-203ENST00000493916 LGALS14Q8TCE9 139 aa17.87■□□□□ 0.45
SNIP1-203ENST00000493916 R3HDM4Q96D70 268 aa17.87■□□□□ 0.45
SNIP1-203ENST00000493916 RBMXL1Q96E39 390 aaKnown RBP17.87■□□□□ 0.45
SNIP1-203ENST00000493916 NOL4LQ96MY1 436 aaPredicted RBP17.87■□□□□ 0.45
SNIP1-203ENST00000493916 AP4M1O00189 453 aa17.86■□□□□ 0.45
SNIP1-203ENST00000493916 ACTBP60709 375 aa17.86■□□□□ 0.45
SNIP1-203ENST00000493916 MXD1Q05195 221 aa17.86■□□□□ 0.45
SNIP1-203ENST00000493916 MMDQ15546 238 aa17.86■□□□□ 0.45
SNIP1-203ENST00000493916 STPG2Q8N412 459 aa17.86■□□□□ 0.45
SNIP1-203ENST00000493916 PHF21AQ96BD5 680 aa17.86■□□□□ 0.45
SNIP1-203ENST00000493916 ABHD14BQ96IU4 210 aa17.86■□□□□ 0.45
SNIP1-203ENST00000493916 RDH8Q9NYR8 311 aa17.86■□□□□ 0.45
SNIP1-203ENST00000493916 NOTCH1P46531 2555 aa17.86■□□□□ 0.45
SNIP1-203ENST00000493916 OR5H14A6NHG9 310 aa17.85■□□□□ 0.45
SNIP1-203ENST00000493916 CT45A6P0DMU7 189 aa17.85■□□□□ 0.45
SNIP1-203ENST00000493916 CT45A5P0DMU8 189 aa17.85■□□□□ 0.45
SNIP1-203ENST00000493916 CT45A7P0DMV0 189 aa17.85■□□□□ 0.45
SNIP1-203ENST00000493916 DTYMKP23919 212 aa17.85■□□□□ 0.45
SNIP1-203ENST00000493916 TALDO1P37837 337 aa17.85■□□□□ 0.45
SNIP1-203ENST00000493916 ARFRP1Q13795 201 aa17.85■□□□□ 0.45
SNIP1-203ENST00000493916 ZNF329Q86UD4 541 aa17.85■□□□□ 0.45
SNIP1-203ENST00000493916 YIPF6Q96EC8 236 aa17.85■□□□□ 0.45
SNIP1-203ENST00000493916 ETV7Q9Y603 341 aa17.85■□□□□ 0.45
SNIP1-203ENST00000493916 TRBV6-7A0A0A0MS04 114 aa17.84■□□□□ 0.45
SNIP1-203ENST00000493916 A0A1W2PRX2 142 aa17.84■□□□□ 0.45
SNIP1-203ENST00000493916 TRIM64CA6NLI5 447 aa17.84■□□□□ 0.45
SNIP1-203ENST00000493916 LINC01548A6NM66 108 aa17.84■□□□□ 0.45
SNIP1-203ENST00000493916 TMEM127O75204 238 aa17.84■□□□□ 0.45
SNIP1-203ENST00000493916 GSTT2P0CG29 244 aa17.84■□□□□ 0.45
SNIP1-203ENST00000493916 GSTT2BP0CG30 244 aa17.84■□□□□ 0.45
SNIP1-203ENST00000493916 SOX6P35712 828 aa17.84■□□□□ 0.45
SNIP1-203ENST00000493916 SLC35B1P78383 322 aa17.84■□□□□ 0.45
SNIP1-203ENST00000493916 CDNFQ49AH0 187 aa17.84■□□□□ 0.45
SNIP1-203ENST00000493916 IGSF11Q5DX21 431 aa17.84■□□□□ 0.45
SNIP1-203ENST00000493916 HACD4Q5VWC8 232 aa17.84■□□□□ 0.45
SNIP1-203ENST00000493916 FAM131AQ6UXB0 335 aa17.84■□□□□ 0.45
SNIP1-203ENST00000493916 COMMD1Q8N668 190 aa17.84■□□□□ 0.45
SNIP1-203ENST00000493916 HSPB9Q9BQS6 159 aa17.84■□□□□ 0.45
SNIP1-203ENST00000493916 RHBDL2Q9NX52 303 aa17.84■□□□□ 0.45
SNIP1-203ENST00000493916 ZNF230Q9UIE0 474 aaPredicted RBP17.84■□□□□ 0.45
SNIP1-203ENST00000493916 LINC00527Q9UJ94 153 aa17.84■□□□□ 0.45
SNIP1-203ENST00000493916 ZNF580Q9UK33 172 aa17.84■□□□□ 0.45
SNIP1-203ENST00000493916 H0YJW9 148 aa17.83■□□□□ 0.44
SNIP1-203ENST00000493916 BET1O15155 118 aa17.83■□□□□ 0.44
SNIP1-203ENST00000493916 NBR2O15453 112 aa17.83■□□□□ 0.44
SNIP1-203ENST00000493916 GSTP1P09211 210 aaKnown RBP17.83■□□□□ 0.44
SNIP1-203ENST00000493916 ZNF436-AS1Q8NC38 126 aaPredicted RBP17.83■□□□□ 0.44
SNIP1-203ENST00000493916 NPBQ8NG41 125 aa17.83■□□□□ 0.44
SNIP1-203ENST00000493916 OR5AN1Q8NGI8 311 aa17.83■□□□□ 0.44
SNIP1-203ENST00000493916 OR10J5Q8NHC4 309 aa17.83■□□□□ 0.44
SNIP1-203ENST00000493916 MAFIPQ8WZ33 124 aa17.83■□□□□ 0.44
SNIP1-203ENST00000493916 RITA1Q96K30 269 aa17.83■□□□□ 0.44
SNIP1-203ENST00000493916 GON7Q9BXV9 100 aa17.83■□□□□ 0.44
SNIP1-203ENST00000493916 ZNF221Q9UK13 617 aa17.83■□□□□ 0.44
SNIP1-203ENST00000493916 ELF5Q9UKW6 265 aaPredicted RBP17.83■□□□□ 0.44
SNIP1-203ENST00000493916 AIREO43918 545 aa17.82■□□□□ 0.44
SNIP1-203ENST00000493916 NDUFA3O95167 84 aa17.82■□□□□ 0.44
SNIP1-203ENST00000493916 MC5RP33032 325 aa17.82■□□□□ 0.44
SNIP1-203ENST00000493916 DEFA6Q01524 100 aa17.82■□□□□ 0.44
SNIP1-203ENST00000493916 IDNKQ5T6J7 187 aa17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms