RNA–Protein interactions for RNA: ENST00000492170.1

MRPL55-231, Transcript of mitochondrial ribosomal protein L55, human

TSL 5

Gene MRPL55, Length 241 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MRPL55-231	ENST00000492170	MRPL20	Q9BYC9	149 aa	Known RBP	11.97	□□□□□ -0.49
MRPL55-231	ENST00000492170	CST11	Q9H112	138 aa		11.97	□□□□□ -0.49
MRPL55-231	ENST00000492170	STUB1	Q9UNE7	303 aa		11.97	□□□□□ -0.49
MRPL55-231	ENST00000492170	AK6	Q9Y3D8	172 aa	Known RBP	11.97	□□□□□ -0.49
MRPL55-231	ENST00000492170	LSM4	Q9Y4Z0	139 aa	Known RBP	11.97	□□□□□ -0.49
MRPL55-231	ENST00000492170		U3KQK5	164 aa		11.97	□□□□□ -0.49
MRPL55-231	ENST00000492170		A0A087WXM4	84 aa		11.96	□□□□□ -0.49
MRPL55-231	ENST00000492170	TMEM14DP	A8MWL7	114 aa		11.96	□□□□□ -0.49
MRPL55-231	ENST00000492170	RGS11	O94810	467 aa		11.96	□□□□□ -0.49
MRPL55-231	ENST00000492170	BPNT1	O95861	308 aa		11.96	□□□□□ -0.49
MRPL55-231	ENST00000492170	HLA-DRB1	P01911	266 aa		11.96	□□□□□ -0.49
MRPL55-231	ENST00000492170	PPP1CC	P36873	323 aa	Known RBP	11.96	□□□□□ -0.49
MRPL55-231	ENST00000492170	HTD2	P86397	168 aa		11.96	□□□□□ -0.49
MRPL55-231	ENST00000492170	UNC119	Q13432	240 aa		11.96	□□□□□ -0.49
MRPL55-231	ENST00000492170	NEDD8	Q15843	81 aa		11.96	□□□□□ -0.49
MRPL55-231	ENST00000492170	ZNF260	Q3ZCT1	412 aa		11.96	□□□□□ -0.49
MRPL55-231	ENST00000492170	SIGIRR	Q6IA17	410 aa		11.96	□□□□□ -0.49
MRPL55-231	ENST00000492170	TSPAN14	Q8NG11	270 aa		11.96	□□□□□ -0.49
MRPL55-231	ENST00000492170	FAM46B	Q96A09	425 aa		11.96	□□□□□ -0.49
MRPL55-231	ENST00000492170	UBE2E2	Q96LR5	201 aa		11.96	□□□□□ -0.49
MRPL55-231	ENST00000492170	PARP11	Q9NR21	331 aa		11.96	□□□□□ -0.49
MRPL55-231	ENST00000492170	VSIG4	Q9Y279	399 aa		11.96	□□□□□ -0.49
MRPL55-231	ENST00000492170	WSB1	Q9Y6I7	421 aa		11.96	□□□□□ -0.49
MRPL55-231	ENST00000492170		V9GY05	133 aa		11.96	□□□□□ -0.49
MRPL55-231	ENST00000492170	ATP6V0E1	O15342	81 aa		11.95	□□□□□ -0.5
MRPL55-231	ENST00000492170	NBR2	O15453	112 aa		11.95	□□□□□ -0.5
MRPL55-231	ENST00000492170	YPEL1	O60688	119 aa		11.95	□□□□□ -0.5
MRPL55-231	ENST00000492170	PPIF	P30405	207 aa	Known RBP	11.95	□□□□□ -0.5
MRPL55-231	ENST00000492170	INSL3	P51460	131 aa		11.95	□□□□□ -0.5
MRPL55-231	ENST00000492170	PSMD7	P51665	324 aa		11.95	□□□□□ -0.5
MRPL55-231	ENST00000492170	NKAPL	Q5M9Q1	402 aa		11.95	□□□□□ -0.5
MRPL55-231	ENST00000492170	C22orf42	Q6IC83	251 aa		11.95	□□□□□ -0.5
MRPL55-231	ENST00000492170	ODF3L1	Q8IXM7	274 aa		11.95	□□□□□ -0.5
MRPL55-231	ENST00000492170	GALM	Q96C23	342 aa		11.95	□□□□□ -0.5
MRPL55-231	ENST00000492170	NEDD4L	Q96PU5	975 aa		11.95	□□□□□ -0.5
MRPL55-231	ENST00000492170	YPEL2	Q96QA6	119 aa		11.95	□□□□□ -0.5
MRPL55-231	ENST00000492170	NABP2	Q9BQ15	211 aa		11.95	□□□□□ -0.5
MRPL55-231	ENST00000492170	TM2D1	Q9BX74	207 aa		11.95	□□□□□ -0.5
MRPL55-231	ENST00000492170	OR51J1	Q9H342	316 aa		11.95	□□□□□ -0.5
MRPL55-231	ENST00000492170	TXNL4B	Q9NX01	149 aa	Known RBP	11.95	□□□□□ -0.5
MRPL55-231	ENST00000492170	KIAA1456	Q9P272	454 aa		11.95	□□□□□ -0.5
MRPL55-231	ENST00000492170	SCOC	Q9UIL1	159 aa		11.95	□□□□□ -0.5
MRPL55-231	ENST00000492170	ZNF256	Q9Y2P7	627 aa	Predicted RBP	11.95	□□□□□ -0.5
MRPL55-231	ENST00000492170	IGHV7-81	A0A0B4J1V7	117 aa		11.94	□□□□□ -0.5
MRPL55-231	ENST00000492170		G3V318	75 aa		11.94	□□□□□ -0.5
MRPL55-231	ENST00000492170		I3L521	148 aa		11.94	□□□□□ -0.5
MRPL55-231	ENST00000492170	PDCD5	O14737	125 aa		11.94	□□□□□ -0.5
MRPL55-231	ENST00000492170	LY86	O95711	162 aa		11.94	□□□□□ -0.5
MRPL55-231	ENST00000492170	MYL9	P24844	172 aa		11.94	□□□□□ -0.5
MRPL55-231	ENST00000492170	RPS27A	P62979	156 aa	Known RBP	11.94	□□□□□ -0.5
MRPL55-231	ENST00000492170	RUNX1	Q01196	453 aa		11.94	□□□□□ -0.5
MRPL55-231	ENST00000492170	ZNF616	Q08AN1	781 aa		11.94	□□□□□ -0.5
MRPL55-231	ENST00000492170	C5orf64	Q2M2E5	130 aa		11.94	□□□□□ -0.5
MRPL55-231	ENST00000492170	LY6G6F	Q5SQ64	297 aa		11.94	□□□□□ -0.5
MRPL55-231	ENST00000492170	OR10K2	Q6IF99	312 aa		11.94	□□□□□ -0.5
MRPL55-231	ENST00000492170	ZNF833P	Q6ZTB9	187 aa		11.94	□□□□□ -0.5
MRPL55-231	ENST00000492170	ZNF491	Q8N8L2	437 aa		11.94	□□□□□ -0.5
MRPL55-231	ENST00000492170	OR2AK2	Q8NG84	335 aa		11.94	□□□□□ -0.5
MRPL55-231	ENST00000492170	OR1N2	Q8NGR9	330 aa		11.94	□□□□□ -0.5
MRPL55-231	ENST00000492170	KCNG3	Q8TAE7	436 aa		11.94	□□□□□ -0.5
MRPL55-231	ENST00000492170	TMEM59	Q9BXS4	323 aa		11.94	□□□□□ -0.5
MRPL55-231	ENST00000492170	KLK15	Q9H2R5	256 aa		11.94	□□□□□ -0.5
MRPL55-231	ENST00000492170	KCNK15	Q9H427	330 aa		11.94	□□□□□ -0.5
MRPL55-231	ENST00000492170	GNB4	Q9HAV0	340 aa		11.94	□□□□□ -0.5
MRPL55-231	ENST00000492170	PLGRKT	Q9HBL7	147 aa		11.94	□□□□□ -0.5
MRPL55-231	ENST00000492170	ABRACL	Q9P1F3	81 aa		11.94	□□□□□ -0.5
MRPL55-231	ENST00000492170	SAA2-SAA4	A0A096LPE2	208 aa		11.93	□□□□□ -0.5
MRPL55-231	ENST00000492170	TRAV41	A0A0B4J266	112 aa		11.93	□□□□□ -0.5
MRPL55-231	ENST00000492170	LDLRAD4	O15165	306 aa		11.93	□□□□□ -0.5
MRPL55-231	ENST00000492170	SAA2	P0DJI9	122 aa	Predicted RBP	11.93	□□□□□ -0.5
MRPL55-231	ENST00000492170	ARSB	P15848	533 aa		11.93	□□□□□ -0.5
MRPL55-231	ENST00000492170	RAB3B	P20337	219 aa		11.93	□□□□□ -0.5
MRPL55-231	ENST00000492170	CNTFR	P26992	372 aa		11.93	□□□□□ -0.5
MRPL55-231	ENST00000492170	BLVRB	P30043	206 aa	Predicted RBP	11.93	□□□□□ -0.5
MRPL55-231	ENST00000492170	RANBP1	P43487	201 aa		11.93	□□□□□ -0.5
MRPL55-231	ENST00000492170	HMGN3	Q15651	99 aa		11.93	□□□□□ -0.5
MRPL55-231	ENST00000492170	RAB11B	Q15907	218 aa		11.93	□□□□□ -0.5
MRPL55-231	ENST00000492170	LIN54	Q6MZP7	749 aa		11.93	□□□□□ -0.5
MRPL55-231	ENST00000492170	FAM71F2	Q6NXP2	309 aa		11.93	□□□□□ -0.5
MRPL55-231	ENST00000492170	C5orf24	Q7Z6I8	188 aa		11.93	□□□□□ -0.5
MRPL55-231	ENST00000492170	NR2C2AP	Q86WQ0	139 aa		11.93	□□□□□ -0.5
MRPL55-231	ENST00000492170	CYYR1	Q96J86	154 aa		11.93	□□□□□ -0.5
MRPL55-231	ENST00000492170	OR5B12	Q96R08	314 aa		11.93	□□□□□ -0.5
MRPL55-231	ENST00000492170	SULT4A1	Q9BR01	284 aa		11.93	□□□□□ -0.5
MRPL55-231	ENST00000492170	OR51E2	Q9H255	320 aa		11.93	□□□□□ -0.5
MRPL55-231	ENST00000492170	STEAP1	Q9UHE8	339 aa		11.93	□□□□□ -0.5
MRPL55-231	ENST00000492170	SSR3	Q9UNL2	185 aa		11.93	□□□□□ -0.5
MRPL55-231	ENST00000492170	IFITM5	A6NNB3	132 aa		11.92	□□□□□ -0.5
MRPL55-231	ENST00000492170	NDUFA3	O95167	84 aa		11.92	□□□□□ -0.5
MRPL55-231	ENST00000492170	IGLV1-40	P01703	118 aa		11.92	□□□□□ -0.5
MRPL55-231	ENST00000492170	CD36	P16671	472 aa		11.92	□□□□□ -0.5
MRPL55-231	ENST00000492170	GADD45A	P24522	165 aa		11.92	□□□□□ -0.5
MRPL55-231	ENST00000492170	CHAT	P28329	748 aa		11.92	□□□□□ -0.5
MRPL55-231	ENST00000492170	OR3A3	P47888	321 aa		11.92	□□□□□ -0.5
MRPL55-231	ENST00000492170	RAB9A	P51151	201 aa		11.92	□□□□□ -0.5
MRPL55-231	ENST00000492170	OR10A3	P58181	314 aa		11.92	□□□□□ -0.5
MRPL55-231	ENST00000492170	GNB1	P62873	340 aa		11.92	□□□□□ -0.5
MRPL55-231	ENST00000492170	KIAA0141	Q14154	515 aa	Predicted RBP	11.92	□□□□□ -0.5
MRPL55-231	ENST00000492170	P2RY14	Q15391	338 aa		11.92	□□□□□ -0.5
MRPL55-231	ENST00000492170	ASPHD1	Q5U4P2	390 aa		11.92	□□□□□ -0.5

Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms