RNA–Protein interactions for RNA: ENST00000489581.1

TOP3B-217, Transcript of DNA topoisomerase III beta, humanhuman

TSL 2

Gene TOP3B, Length 789 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-217ENST00000489581 GLAP06280 429 aa13.01□□□□□ -0.33
TOP3B-217ENST00000489581 TPPP2P59282 170 aa13.01□□□□□ -0.33
TOP3B-217ENST00000489581 PYHIN1Q6K0P9 492 aa13.01□□□□□ -0.33
TOP3B-217ENST00000489581 CD200R1LQ6Q8B3 271 aa13.01□□□□□ -0.33
TOP3B-217ENST00000489581 GLDNQ6ZMI3 551 aaPredicted RBP13.01□□□□□ -0.33
TOP3B-217ENST00000489581 ZNF554Q86TJ5 538 aa13.01□□□□□ -0.33
TOP3B-217ENST00000489581 ANKRD13BQ86YJ7 626 aa13.01□□□□□ -0.33
TOP3B-217ENST00000489581 ZFP41Q8N8Y5 198 aa13.01□□□□□ -0.33
TOP3B-217ENST00000489581 OR2AK2Q8NG84 335 aa13.01□□□□□ -0.33
TOP3B-217ENST00000489581 GALMQ96C23 342 aa13.01□□□□□ -0.33
TOP3B-217ENST00000489581 RHOVQ96L33 236 aa13.01□□□□□ -0.33
TOP3B-217ENST00000489581 Q96M66 194 aa13.01□□□□□ -0.33
TOP3B-217ENST00000489581 RDH12Q96NR8 316 aa13.01□□□□□ -0.33
TOP3B-217ENST00000489581 IFI27L2Q9H2X8 130 aa13.01□□□□□ -0.33
TOP3B-217ENST00000489581 BABAM2Q9NXR7 383 aa13.01□□□□□ -0.33
TOP3B-217ENST00000489581 CNOT2Q9NZN8 540 aaKnown RBP13.01□□□□□ -0.33
TOP3B-217ENST00000489581 FAM90A7PA6NKC0 464 aa13□□□□□ -0.33
TOP3B-217ENST00000489581 FAM90A23PA8MXZ1 464 aa13□□□□□ -0.33
TOP3B-217ENST00000489581 PDCD6O75340 191 aa13□□□□□ -0.33
TOP3B-217ENST00000489581 ATP5HO75947 161 aa13□□□□□ -0.33
TOP3B-217ENST00000489581 SNRPBP14678 240 aaKnown RBP13□□□□□ -0.33
TOP3B-217ENST00000489581 ARSBP15848 533 aa13□□□□□ -0.33
TOP3B-217ENST00000489581 DCKP27707 260 aa13□□□□□ -0.33
TOP3B-217ENST00000489581 RPS11P62280 158 aaKnown RBP eCLIP13□□□□□ -0.33
TOP3B-217ENST00000489581 Q499Y3 187 aa13□□□□□ -0.33
TOP3B-217ENST00000489581 RPL39P5Q59GN2 51 aa13□□□□□ -0.33
TOP3B-217ENST00000489581 LY6G6FQ5SQ64 297 aa13□□□□□ -0.33
TOP3B-217ENST00000489581 LFNGQ8NES3 379 aa13□□□□□ -0.33
TOP3B-217ENST00000489581 SLC29A1Q99808 456 aa13□□□□□ -0.33
TOP3B-217ENST00000489581 SPATA25Q9BR10 227 aa13□□□□□ -0.33
TOP3B-217ENST00000489581 RNF150Q9ULK6 438 aa13□□□□□ -0.33
TOP3B-217ENST00000489581 HYDINQ4G0P3 5121 aa12.99□□□□□ -0.33
TOP3B-217ENST00000489581 WBP4O75554 376 aaKnown RBP12.99□□□□□ -0.33
TOP3B-217ENST00000489581 TRGV3P03979 118 aa12.99□□□□□ -0.33
TOP3B-217ENST00000489581 GSTP1P09211 210 aaKnown RBP12.99□□□□□ -0.33
TOP3B-217ENST00000489581 CT45A6P0DMU7 189 aa12.99□□□□□ -0.33
TOP3B-217ENST00000489581 CT45A5P0DMU8 189 aa12.99□□□□□ -0.33
TOP3B-217ENST00000489581 CT45A7P0DMV0 189 aa12.99□□□□□ -0.33
TOP3B-217ENST00000489581 FSTP19883 344 aa12.99□□□□□ -0.33
TOP3B-217ENST00000489581 HAGHQ16775 308 aa12.99□□□□□ -0.33
TOP3B-217ENST00000489581 AKIRIN2Q53H80 203 aa12.99□□□□□ -0.33
TOP3B-217ENST00000489581 DMKNQ6E0U4 476 aaPredicted RBP12.99□□□□□ -0.33
TOP3B-217ENST00000489581 IL1F10Q8WWZ1 152 aa12.99□□□□□ -0.33
TOP3B-217ENST00000489581 FAM46BQ96A09 425 aa12.99□□□□□ -0.33
TOP3B-217ENST00000489581 OR14A2Q96R54 314 aa12.99□□□□□ -0.33
TOP3B-217ENST00000489581 CLEC2DQ9UHP7 191 aa12.99□□□□□ -0.33
TOP3B-217ENST00000489581 TRBV5-7A0A0A0MS05 114 aa12.98□□□□□ -0.33
TOP3B-217ENST00000489581 H7C2Y5 167 aa12.98□□□□□ -0.33
TOP3B-217ENST00000489581 RAB29O14966 203 aa12.98□□□□□ -0.33
TOP3B-217ENST00000489581 ARPC1BO15143 372 aaKnown RBP12.98□□□□□ -0.33
TOP3B-217ENST00000489581 CD40LGP29965 261 aa12.98□□□□□ -0.33
TOP3B-217ENST00000489581 CAPGP40121 348 aa12.98□□□□□ -0.33
TOP3B-217ENST00000489581 HMGN3Q15651 99 aa12.98□□□□□ -0.33
TOP3B-217ENST00000489581 YIF1BQ5BJH7 314 aa12.98□□□□□ -0.33
TOP3B-217ENST00000489581 C6orf141Q5SZD1 244 aa12.98□□□□□ -0.33
TOP3B-217ENST00000489581 FAM71F2Q6NXP2 309 aa12.98□□□□□ -0.33
TOP3B-217ENST00000489581 PGLYRP3Q96LB9 341 aa12.98□□□□□ -0.33
TOP3B-217ENST00000489581 ZNF355PQ9NSJ1 428 aa12.98□□□□□ -0.33
TOP3B-217ENST00000489581 PIPOXQ9P0Z9 390 aa12.98□□□□□ -0.33
TOP3B-217ENST00000489581 STEAP1Q9UHE8 339 aa12.98□□□□□ -0.33
TOP3B-217ENST00000489581 LRRC42Q9Y546 428 aa12.98□□□□□ -0.33
TOP3B-217ENST00000489581 PNMA8CA0A1B0GUJ8 204 aa12.97□□□□□ -0.33
TOP3B-217ENST00000489581 H0YJW9 148 aa12.97□□□□□ -0.33
TOP3B-217ENST00000489581 IFNA6P05013 189 aa12.97□□□□□ -0.33
TOP3B-217ENST00000489581 ZNF562Q6V9R5 426 aa12.97□□□□□ -0.33
TOP3B-217ENST00000489581 ABHD14BQ96IU4 210 aa12.97□□□□□ -0.33
TOP3B-217ENST00000489581 SULT4A1Q9BR01 284 aa12.97□□□□□ -0.33
TOP3B-217ENST00000489581 C9orf16Q9BUW7 83 aa12.97□□□□□ -0.33
TOP3B-217ENST00000489581 SLA2Q9H6Q3 261 aa12.97□□□□□ -0.33
TOP3B-217ENST00000489581 ABRACLQ9P1F3 81 aa12.97□□□□□ -0.33
TOP3B-217ENST00000489581 METTL1Q9UBP6 276 aaKnown RBP12.97□□□□□ -0.33
TOP3B-217ENST00000489581 WASHC3Q9Y3C0 194 aa12.97□□□□□ -0.33
TOP3B-217ENST00000489581 ANKRD34BA5PLL1 514 aa12.96□□□□□ -0.33
TOP3B-217ENST00000489581 OR5H14A6NHG9 310 aa12.96□□□□□ -0.33
TOP3B-217ENST00000489581 CA2P00918 260 aa12.96□□□□□ -0.33
TOP3B-217ENST00000489581 TFAP2AP05549 437 aa12.96□□□□□ -0.33
TOP3B-217ENST00000489581 MYL12AP19105 171 aa12.96□□□□□ -0.33
TOP3B-217ENST00000489581 MC5RP33032 325 aa12.96□□□□□ -0.33
TOP3B-217ENST00000489581 ZFP1Q6P2D0 407 aa12.96□□□□□ -0.33
TOP3B-217ENST00000489581 CDH26Q8IXH8 852 aa12.96□□□□□ -0.33
TOP3B-217ENST00000489581 NEDD4LQ96PU5 975 aa12.96□□□□□ -0.33
TOP3B-217ENST00000489581 FAAP24Q9BTP7 215 aa12.96□□□□□ -0.33
TOP3B-217ENST00000489581 TMED9Q9BVK6 235 aa12.96□□□□□ -0.33
TOP3B-217ENST00000489581 PARP12Q9H0J9 701 aaKnown RBP12.96□□□□□ -0.33
TOP3B-217ENST00000489581 TUBA4BQ9H853 241 aa12.96□□□□□ -0.33
TOP3B-217ENST00000489581 RANGRFQ9HD47 186 aaPredicted RBP12.96□□□□□ -0.33
TOP3B-217ENST00000489581 SLC23A1Q9UHI7 598 aa12.96□□□□□ -0.33
TOP3B-217ENST00000489581 EXOSC1Q9Y3B2 195 aaKnown RBP12.96□□□□□ -0.33
TOP3B-217ENST00000489581 C13orf42A0A1B0GVH6 325 aa12.95□□□□□ -0.34
TOP3B-217ENST00000489581 JTBO76095 146 aa12.95□□□□□ -0.34
TOP3B-217ENST00000489581 ZP3P21754 424 aa12.95□□□□□ -0.34
TOP3B-217ENST00000489581 PSG5Q15238 335 aa12.95□□□□□ -0.34
TOP3B-217ENST00000489581 OR5T1Q8NG75 326 aa12.95□□□□□ -0.34
TOP3B-217ENST00000489581 OR5AN1Q8NGI8 311 aa12.95□□□□□ -0.34
TOP3B-217ENST00000489581 GRPEL2Q8TAA5 225 aa12.95□□□□□ -0.34
TOP3B-217ENST00000489581 DERL3Q96Q80 235 aa12.95□□□□□ -0.34
TOP3B-217ENST00000489581 NKX1-2Q9UD57 310 aaPredicted RBP12.95□□□□□ -0.34
TOP3B-217ENST00000489581 DIMT1Q9UNQ2 313 aaKnown RBP12.95□□□□□ -0.34
TOP3B-217ENST00000489581 H0Y980 276 aa12.94□□□□□ -0.34
TOP3B-217ENST00000489581 RBBP9O75884 186 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms