RNA–Protein interactions for RNA: ENST00000489212.2

LIME1-207, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

TSL 5

Gene LIME1, Length 559 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-207ENST00000489212 DNAH3Q8TD57 4116 aa16.69■□□□□ 0.26
LIME1-207ENST00000489212 NOTOA8MTQ0 251 aa16.69■□□□□ 0.26
LIME1-207ENST00000489212 MFNGO00587 321 aa16.69■□□□□ 0.26
LIME1-207ENST00000489212 CEACAM6P40199 344 aa16.69■□□□□ 0.26
LIME1-207ENST00000489212 RPL39P5Q59GN2 51 aa16.69■□□□□ 0.26
LIME1-207ENST00000489212 STPG2Q8N412 459 aa16.69■□□□□ 0.26
LIME1-207ENST00000489212 OR8H1Q8NGG4 311 aa16.69■□□□□ 0.26
LIME1-207ENST00000489212 CHPT1Q8WUD6 406 aa16.69■□□□□ 0.26
LIME1-207ENST00000489212 PTX4Q96A99 478 aa16.69■□□□□ 0.26
LIME1-207ENST00000489212 ABHD14BQ96IU4 210 aa16.69■□□□□ 0.26
LIME1-207ENST00000489212 HSPB9Q9BQS6 159 aa16.69■□□□□ 0.26
LIME1-207ENST00000489212 C11orf54Q9H0W9 315 aaPredicted RBP16.69■□□□□ 0.26
LIME1-207ENST00000489212 A0A075B6Q4 140 aa16.68■□□□□ 0.26
LIME1-207ENST00000489212 TRDCB7Z8K6 153 aa16.68■□□□□ 0.26
LIME1-207ENST00000489212 ITGB1BP1O14713 200 aa16.68■□□□□ 0.26
LIME1-207ENST00000489212 CD3GP09693 182 aa16.68■□□□□ 0.26
LIME1-207ENST00000489212 HIST1H1DP16402 221 aaKnown RBP16.68■□□□□ 0.26
LIME1-207ENST00000489212 ZBTB25P24278 435 aa16.68■□□□□ 0.26
LIME1-207ENST00000489212 GADD45AP24522 165 aa16.68■□□□□ 0.26
LIME1-207ENST00000489212 CNTFRP26992 372 aa16.68■□□□□ 0.26
LIME1-207ENST00000489212 TPRA1Q86W33 373 aa16.68■□□□□ 0.26
LIME1-207ENST00000489212 RASL11BQ9BPW5 248 aa16.68■□□□□ 0.26
LIME1-207ENST00000489212 CHCHD6Q9BRQ6 235 aa16.68■□□□□ 0.26
LIME1-207ENST00000489212 PIPOXQ9P0Z9 390 aa16.68■□□□□ 0.26
LIME1-207ENST00000489212 RAB29O14966 203 aa16.67■□□□□ 0.26
LIME1-207ENST00000489212 HSPA12AO43301 675 aa16.67■□□□□ 0.26
LIME1-207ENST00000489212 FCGR3AP08637 254 aa16.67■□□□□ 0.26
LIME1-207ENST00000489212 CLEC2LP0C7M8 214 aa16.67■□□□□ 0.26
LIME1-207ENST00000489212 CT45A6P0DMU7 189 aa16.67■□□□□ 0.26
LIME1-207ENST00000489212 CT45A5P0DMU8 189 aa16.67■□□□□ 0.26
LIME1-207ENST00000489212 CT45A7P0DMV0 189 aa16.67■□□□□ 0.26
LIME1-207ENST00000489212 SDC2P34741 201 aa16.67■□□□□ 0.26
LIME1-207ENST00000489212 ACTBP60709 375 aa16.67■□□□□ 0.26
LIME1-207ENST00000489212 KHDC1LQ5JSQ8 128 aa16.67■□□□□ 0.26
LIME1-207ENST00000489212 SAMD5Q5TGI4 173 aa16.67■□□□□ 0.26
LIME1-207ENST00000489212 FAM71F2Q6NXP2 309 aa16.67■□□□□ 0.26
LIME1-207ENST00000489212 FOXRED2Q8IWF2 684 aa16.67■□□□□ 0.26
LIME1-207ENST00000489212 ELF5Q9UKW6 265 aaPredicted RBP16.67■□□□□ 0.26
LIME1-207ENST00000489212 TGP01266 2768 aa16.67■□□□□ 0.26
LIME1-207ENST00000489212 METTL21EPA6NDL7 271 aa16.66■□□□□ 0.26
LIME1-207ENST00000489212 CD36P16671 472 aa16.66■□□□□ 0.26
LIME1-207ENST00000489212 MMDQ15546 238 aa16.66■□□□□ 0.26
LIME1-207ENST00000489212 PDLIM3Q53GG5 364 aaPredicted RBP16.66■□□□□ 0.26
LIME1-207ENST00000489212 SFXN4Q6P4A7 337 aa16.66■□□□□ 0.26
LIME1-207ENST00000489212 GLDNQ6ZMI3 551 aaPredicted RBP16.66■□□□□ 0.26
LIME1-207ENST00000489212 MAFIPQ8WZ33 124 aa16.66■□□□□ 0.26
LIME1-207ENST00000489212 KCTD7Q96MP8 289 aa16.66■□□□□ 0.26
LIME1-207ENST00000489212 ATG5Q9H1Y0 275 aa16.66■□□□□ 0.26
LIME1-207ENST00000489212 ZNF230Q9UIE0 474 aaPredicted RBP16.66■□□□□ 0.26
LIME1-207ENST00000489212 DAPK2Q9UIK4 370 aa16.66■□□□□ 0.26
LIME1-207ENST00000489212 RNF150Q9ULK6 438 aa16.66■□□□□ 0.26
LIME1-207ENST00000489212 LOC100506127A0A0U1RQW1 187 aa16.65■□□□□ 0.26
LIME1-207ENST00000489212 AP4M1O00189 453 aa16.65■□□□□ 0.26
LIME1-207ENST00000489212 FABP7O15540 132 aa16.65■□□□□ 0.26
LIME1-207ENST00000489212 PROP1O75360 226 aa16.65■□□□□ 0.26
LIME1-207ENST00000489212 GSTT2P0CG29 244 aa16.65■□□□□ 0.26
LIME1-207ENST00000489212 GSTT2BP0CG30 244 aa16.65■□□□□ 0.26
LIME1-207ENST00000489212 PF4V1P10720 104 aa16.65■□□□□ 0.26
LIME1-207ENST00000489212 SNRPBP14678 240 aaKnown RBP16.65■□□□□ 0.26
LIME1-207ENST00000489212 MRPS15P82914 257 aaKnown RBP16.65■□□□□ 0.26
LIME1-207ENST00000489212 BEAN1Q3B7T3 259 aa16.65■□□□□ 0.26
LIME1-207ENST00000489212 FAM131AQ6UXB0 335 aa16.65■□□□□ 0.26
LIME1-207ENST00000489212 C18orf65Q6ZTR6 163 aa16.65■□□□□ 0.26
LIME1-207ENST00000489212 OR4A4PQ8NGN8 299 aa16.65■□□□□ 0.26
LIME1-207ENST00000489212 EDARADDQ8WWZ3 215 aa16.65■□□□□ 0.26
LIME1-207ENST00000489212 CENPOQ9BU64 300 aa16.65■□□□□ 0.26
LIME1-207ENST00000489212 RDH8Q9NYR8 311 aa16.65■□□□□ 0.26
LIME1-207ENST00000489212 SOX6P35712 828 aa16.64■□□□□ 0.25
LIME1-207ENST00000489212 MXD1Q05195 221 aa16.64■□□□□ 0.25
LIME1-207ENST00000489212 IGSF11Q5DX21 431 aa16.64■□□□□ 0.25
LIME1-207ENST00000489212 CABLES2Q9BTV7 478 aa16.64■□□□□ 0.25
LIME1-207ENST00000489212 TOLLIPQ9H0E2 274 aa16.64■□□□□ 0.25
LIME1-207ENST00000489212 H0YJW9 148 aa16.63■□□□□ 0.25
LIME1-207ENST00000489212 RPL23AP62750 156 aaKnown RBP16.63■□□□□ 0.25
LIME1-207ENST00000489212 SLC35B1P78383 322 aa16.63■□□□□ 0.25
LIME1-207ENST00000489212 OXLD1Q5BKU9 147 aa16.63■□□□□ 0.25
LIME1-207ENST00000489212 WFDC9Q8NEX5 89 aa16.63■□□□□ 0.25
LIME1-207ENST00000489212 NPBQ8NG41 125 aa16.63■□□□□ 0.25
LIME1-207ENST00000489212 LGALS14Q8TCE9 139 aa16.63■□□□□ 0.25
LIME1-207ENST00000489212 PHF21AQ96BD5 680 aa16.63■□□□□ 0.25
LIME1-207ENST00000489212 GHITMQ9H3K2 345 aa16.63■□□□□ 0.25
LIME1-207ENST00000489212 ZNF107Q9UII5 783 aaPredicted RBP16.63■□□□□ 0.25
LIME1-207ENST00000489212 IGKV1D-8A0A087WSZ0 117 aa16.62■□□□□ 0.25
LIME1-207ENST00000489212 BET1O15155 118 aa16.62■□□□□ 0.25
LIME1-207ENST00000489212 NBR2O15453 112 aa16.62■□□□□ 0.25
LIME1-207ENST00000489212 LINC00205P59089 165 aa16.62■□□□□ 0.25
LIME1-207ENST00000489212 CFHR3Q02985 330 aa16.62■□□□□ 0.25
LIME1-207ENST00000489212 ARFRP1Q13795 201 aa16.62■□□□□ 0.25
LIME1-207ENST00000489212 KIR2DS1Q14954 304 aa16.62■□□□□ 0.25
LIME1-207ENST00000489212 CDNFQ49AH0 187 aa16.62■□□□□ 0.25
LIME1-207ENST00000489212 KPRPQ5T749 579 aaPredicted RBP16.62■□□□□ 0.25
LIME1-207ENST00000489212 DRAXINQ8NBI3 349 aaPredicted RBP16.62■□□□□ 0.25
LIME1-207ENST00000489212 OR5AN1Q8NGI8 311 aa16.62■□□□□ 0.25
LIME1-207ENST00000489212 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP16.62■□□□□ 0.25
LIME1-207ENST00000489212 TRBV6-7A0A0A0MS04 114 aa16.61■□□□□ 0.25
LIME1-207ENST00000489212 OR5H14A6NHG9 310 aa16.61■□□□□ 0.25
LIME1-207ENST00000489212 NDUFA3O95167 84 aa16.61■□□□□ 0.25
LIME1-207ENST00000489212 SERPINB10P48595 397 aa16.61■□□□□ 0.25
LIME1-207ENST00000489212 PNLIPRP3Q17RR3 467 aa16.61■□□□□ 0.25
LIME1-207ENST00000489212 C5orf64Q2M2E5 130 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms