RNA–Protein interactions for RNA: ENST00000487747.5

SMC4-219, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 637 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-219ENST00000487747 GTF2BQ00403 316 aa0.36□□□□□ -2.35
SMC4-219ENST00000487747 ZNF791Q3KP31 576 aaPredicted RBP0.36□□□□□ -2.35
SMC4-219ENST00000487747 PABPC1L2AQ5JQF8 200 aa0.36□□□□□ -2.35
SMC4-219ENST00000487747 OR10J3Q5JRS4 329 aa0.36□□□□□ -2.35
SMC4-219ENST00000487747 AHSA2Q719I0 299 aa0.36□□□□□ -2.35
SMC4-219ENST00000487747 DOLPP1Q86YN1 238 aa0.36□□□□□ -2.35
SMC4-219ENST00000487747 ST13P4Q8IZP2 240 aaPredicted RBP0.36□□□□□ -2.35
SMC4-219ENST00000487747 RNF133Q8WVZ7 376 aa0.36□□□□□ -2.35
SMC4-219ENST00000487747 TMEM239Q8WW34 195 aa0.36□□□□□ -2.35
SMC4-219ENST00000487747 RORBQ92753 470 aa0.36□□□□□ -2.35
SMC4-219ENST00000487747 TAMM41Q96BW9 452 aa0.36□□□□□ -2.35
SMC4-219ENST00000487747 LRRC39Q96DD0 335 aa0.36□□□□□ -2.35
SMC4-219ENST00000487747 CHST5Q9GZS9 411 aa0.36□□□□□ -2.35
SMC4-219ENST00000487747 OR51B6Q9H340 312 aa0.36□□□□□ -2.35
SMC4-219ENST00000487747 UBQLN4Q9NRR5 601 aa0.36□□□□□ -2.35
SMC4-219ENST00000487747 LINC00527Q9UJ94 153 aa0.36□□□□□ -2.35
SMC4-219ENST00000487747 CHD2O14647 1828 aaKnown RBP0.36□□□□□ -2.35
SMC4-219ENST00000487747 PCDH15Q96QU1 1955 aa0.36□□□□□ -2.35
SMC4-219ENST00000487747 FREM1Q5H8C1 2179 aa0.35□□□□□ -2.35
SMC4-219ENST00000487747 MDFIC2A0A1B0GVS7 189 aa0.35□□□□□ -2.35
SMC4-219ENST00000487747 A0A1B0GW15 77 aa0.35□□□□□ -2.35
SMC4-219ENST00000487747 C9J4A7 227 aa0.35□□□□□ -2.35
SMC4-219ENST00000487747 PHYHO14832 338 aa0.35□□□□□ -2.35
SMC4-219ENST00000487747 PLA2G10O15496 165 aa0.35□□□□□ -2.35
SMC4-219ENST00000487747 UGT2B11O75310 529 aa0.35□□□□□ -2.35
SMC4-219ENST00000487747 CD7P09564 240 aa0.35□□□□□ -2.35
SMC4-219ENST00000487747 CCL2P13500 99 aa0.35□□□□□ -2.35
SMC4-219ENST00000487747 ATP6V0CP27449 155 aa0.35□□□□□ -2.35
SMC4-219ENST00000487747 XCL1P47992 114 aa0.35□□□□□ -2.35
SMC4-219ENST00000487747 PLCZ1Q86YW0 608 aa0.35□□□□□ -2.35
SMC4-219ENST00000487747 CNPY4Q8N129 248 aa0.35□□□□□ -2.35
SMC4-219ENST00000487747 OR51H1Q8NH63 302 aa0.35□□□□□ -2.35
SMC4-219ENST00000487747 ASB17Q8WXJ9 295 aa0.35□□□□□ -2.35
SMC4-219ENST00000487747 CATSPER2Q96P56 530 aa0.35□□□□□ -2.35
SMC4-219ENST00000487747 TRNT1Q96Q11 434 aaKnown RBP0.35□□□□□ -2.35
SMC4-219ENST00000487747 MED18Q9BUE0 208 aa0.35□□□□□ -2.35
SMC4-219ENST00000487747 UGT2B28Q9BY64 529 aa0.35□□□□□ -2.35
SMC4-219ENST00000487747 NKX6-2Q9C056 277 aaPredicted RBP0.35□□□□□ -2.35
SMC4-219ENST00000487747 SNX12Q9UMY4 172 aa0.35□□□□□ -2.35
SMC4-219ENST00000487747 WDR90Q96KV7 1748 aa0.35□□□□□ -2.35
SMC4-219ENST00000487747 CLUHO75153 1309 aa0.35□□□□□ -2.35
SMC4-219ENST00000487747 KIAA0232Q92628 1395 aa0.34□□□□□ -2.35
SMC4-219ENST00000487747 TRGV5A0A0B4J1U4 118 aa0.34□□□□□ -2.36
SMC4-219ENST00000487747 TRAV41A0A0B4J266 112 aa0.34□□□□□ -2.36
SMC4-219ENST00000487747 EFCAB9A8MZ26 197 aa0.34□□□□□ -2.36
SMC4-219ENST00000487747 ZW10O43264 779 aa0.34□□□□□ -2.36
SMC4-219ENST00000487747 SGCEO43556 437 aa0.34□□□□□ -2.36
SMC4-219ENST00000487747 CYTH3O43739 400 aa0.34□□□□□ -2.36
SMC4-219ENST00000487747 IGHV1-69P01742 117 aa0.34□□□□□ -2.36
SMC4-219ENST00000487747 ORM2P19652 201 aa0.34□□□□□ -2.36
SMC4-219ENST00000487747 RPL14P50914 215 aaKnown RBP0.34□□□□□ -2.36
SMC4-219ENST00000487747 DAPP51397 102 aa0.34□□□□□ -2.36
SMC4-219ENST00000487747 CARD18P57730 90 aa0.34□□□□□ -2.36
SMC4-219ENST00000487747 UBE2KP61086 200 aa0.34□□□□□ -2.36
SMC4-219ENST00000487747 DYNLL1P63167 89 aaKnown RBP0.34□□□□□ -2.36
SMC4-219ENST00000487747 ERHP84090 104 aaKnown RBP0.34□□□□□ -2.36
SMC4-219ENST00000487747 OR10K2Q6IF99 312 aa0.34□□□□□ -2.36
SMC4-219ENST00000487747 LHFPL1Q86WI0 220 aa0.34□□□□□ -2.36
SMC4-219ENST00000487747 PDCL2Q8N4E4 241 aa0.34□□□□□ -2.36
SMC4-219ENST00000487747 CNEP1R1Q8N9A8 125 aa0.34□□□□□ -2.36
SMC4-219ENST00000487747 IFT81Q8WYA0 676 aa0.34□□□□□ -2.36
SMC4-219ENST00000487747 FGF13Q92913 245 aa0.34□□□□□ -2.36
SMC4-219ENST00000487747 ABHD14BQ96IU4 210 aa0.34□□□□□ -2.36
SMC4-219ENST00000487747 MRM2Q9UI43 246 aaKnown RBP0.34□□□□□ -2.36
SMC4-219ENST00000487747 SOX21Q9Y651 276 aaPredicted RBP0.34□□□□□ -2.36
SMC4-219ENST00000487747 KMT2DO14686 5537 aa0.34□□□□□ -2.36
SMC4-219ENST00000487747 ZFHX2Q9C0A1 2572 aaPredicted RBP0.34□□□□□ -2.36
SMC4-219ENST00000487747 MYOFQ9NZM1 2061 aa0.33□□□□□ -2.36
SMC4-219ENST00000487747 IGHV3-64A0A075B6Q5 118 aa0.33□□□□□ -2.36
SMC4-219ENST00000487747 OR11H12B2RN74 326 aa0.33□□□□□ -2.36
SMC4-219ENST00000487747 STK16O75716 305 aa0.33□□□□□ -2.36
SMC4-219ENST00000487747 LDOC1O95751 146 aaPredicted RBP0.33□□□□□ -2.36
SMC4-219ENST00000487747 CRYBA1P05813 215 aa0.33□□□□□ -2.36
SMC4-219ENST00000487747 NQO2P16083 231 aa0.33□□□□□ -2.36
SMC4-219ENST00000487747 KCNJ3P48549 501 aa0.33□□□□□ -2.36
SMC4-219ENST00000487747 SERPINB10P48595 397 aa0.33□□□□□ -2.36
SMC4-219ENST00000487747 ACTBP60709 375 aa0.33□□□□□ -2.36
SMC4-219ENST00000487747 ACTG1P63261 375 aa0.33□□□□□ -2.36
SMC4-219ENST00000487747 FLOT2Q14254 428 aa0.33□□□□□ -2.36
SMC4-219ENST00000487747 TBC1D28Q2M2D7 210 aa0.33□□□□□ -2.36
SMC4-219ENST00000487747 TMEM249Q2WGJ8 235 aa0.33□□□□□ -2.36
SMC4-219ENST00000487747 HSP90B2PQ58FF3 399 aa0.33□□□□□ -2.36
SMC4-219ENST00000487747 OR11H2Q8NH07 326 aa0.33□□□□□ -2.36
SMC4-219ENST00000487747 OR5J2Q8NH18 312 aa0.33□□□□□ -2.36
SMC4-219ENST00000487747 CLDND2Q8NHS1 167 aa0.33□□□□□ -2.36
SMC4-219ENST00000487747 SMCR5Q8TEV8 140 aa0.33□□□□□ -2.36
SMC4-219ENST00000487747 TNFAIP8L1Q8WVP5 186 aa0.33□□□□□ -2.36
SMC4-219ENST00000487747 ACY3Q96HD9 319 aa0.33□□□□□ -2.36
SMC4-219ENST00000487747 Q96M85 177 aa0.33□□□□□ -2.36
SMC4-219ENST00000487747 FAM210AQ96ND0 272 aa0.33□□□□□ -2.36
SMC4-219ENST00000487747 PRRG3Q9BZD7 231 aa0.33□□□□□ -2.36
SMC4-219ENST00000487747 MED28Q9H204 178 aa0.33□□□□□ -2.36
SMC4-219ENST00000487747 COMMD9Q9P000 198 aa0.33□□□□□ -2.36
SMC4-219ENST00000487747 HHLA3Q9XRX5 114 aa0.33□□□□□ -2.36
SMC4-219ENST00000487747 ANGPT4Q9Y264 503 aa0.33□□□□□ -2.36
SMC4-219ENST00000487747 INTS1Q8N201 2190 aaKnown RBP0.33□□□□□ -2.36
SMC4-219ENST00000487747 BAZ2BQ9UIF8 2168 aaKnown RBP0.33□□□□□ -2.36
SMC4-219ENST00000487747 DIDO1Q9BTC0 2240 aaKnown RBP0.33□□□□□ -2.36
SMC4-219ENST00000487747 CHD5Q8TDI0 1954 aa0.32□□□□□ -2.36
SMC4-219ENST00000487747 IGKV2-40A0A087WW87 121 aaPredicted RBP0.32□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms