RNA–Protein interactions for RNA: ENST00000486427.1

LTN1-206, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 2

Gene LTN1, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-206ENST00000486427 TPRXLQ17RH7 258 aa1.27□□□□□ -2.21
LTN1-206ENST00000486427 SCGB1D4Q6XE38 83 aa1.27□□□□□ -2.21
LTN1-206ENST00000486427 CCDC121Q6ZUS5 278 aa1.27□□□□□ -2.21
LTN1-206ENST00000486427 FNDC9Q8TBE3 224 aa1.27□□□□□ -2.21
LTN1-206ENST00000486427 DCANP1Q8TF63 244 aa1.27□□□□□ -2.21
LTN1-206ENST00000486427 ACY3Q96HD9 319 aa1.27□□□□□ -2.21
LTN1-206ENST00000486427 ABHD14BQ96IU4 210 aa1.27□□□□□ -2.21
LTN1-206ENST00000486427 TRNT1Q96Q11 434 aaKnown RBP1.27□□□□□ -2.21
LTN1-206ENST00000486427 MGLLQ99685 303 aa1.27□□□□□ -2.21
LTN1-206ENST00000486427 MED10Q9BTT4 135 aa1.27□□□□□ -2.21
LTN1-206ENST00000486427 C1orf109Q9NX04 203 aa1.27□□□□□ -2.21
LTN1-206ENST00000486427 DNAJC12Q9UKB3 198 aa1.27□□□□□ -2.21
LTN1-206ENST00000486427 HHLA2Q9UM44 414 aa1.27□□□□□ -2.21
LTN1-206ENST00000486427 SNX10Q9Y5X0 201 aa1.27□□□□□ -2.21
LTN1-206ENST00000486427 DSCAML1Q8TD84 2053 aa1.27□□□□□ -2.21
LTN1-206ENST00000486427 FLG2Q5D862 2391 aaPredicted RBP1.26□□□□□ -2.21
LTN1-206ENST00000486427 HSBP1L1C9JCN9 74 aa1.26□□□□□ -2.21
LTN1-206ENST00000486427 H3BPC8 53 aa1.26□□□□□ -2.21
LTN1-206ENST00000486427 CD7P09564 240 aa1.26□□□□□ -2.21
LTN1-206ENST00000486427 GZMBP10144 247 aa1.26□□□□□ -2.21
LTN1-206ENST00000486427 CCL3P10147 92 aa1.26□□□□□ -2.21
LTN1-206ENST00000486427 NPPCP23582 126 aa1.26□□□□□ -2.21
LTN1-206ENST00000486427 CRHBPP24387 322 aa1.26□□□□□ -2.21
LTN1-206ENST00000486427 ATP6V0CP27449 155 aa1.26□□□□□ -2.21
LTN1-206ENST00000486427 ADORA1P30542 326 aa1.26□□□□□ -2.21
LTN1-206ENST00000486427 AGTR1P30556 359 aa1.26□□□□□ -2.21
LTN1-206ENST00000486427 HSPA9P38646 679 aaKnown RBP1.26□□□□□ -2.21
LTN1-206ENST00000486427 CD200P41217 278 aa1.26□□□□□ -2.21
LTN1-206ENST00000486427 KRTAP10-4P60372 401 aaPredicted RBP1.26□□□□□ -2.21
LTN1-206ENST00000486427 LRRC26Q2I0M4 334 aa1.26□□□□□ -2.21
LTN1-206ENST00000486427 SPATA31B1PQ5VZV4 182 aa1.26□□□□□ -2.21
LTN1-206ENST00000486427 OR52E4Q8NGH9 312 aa1.26□□□□□ -2.21
LTN1-206ENST00000486427 SMIM12Q96EX1 92 aa1.26□□□□□ -2.21
LTN1-206ENST00000486427 OR52B2Q96RD2 323 aa1.26□□□□□ -2.21
LTN1-206ENST00000486427 PECRQ9BY49 303 aa1.26□□□□□ -2.21
LTN1-206ENST00000486427 PRO2289Q9P1D8 64 aa1.26□□□□□ -2.21
LTN1-206ENST00000486427 GLS2Q9UI32 602 aa1.26□□□□□ -2.21
LTN1-206ENST00000486427 PSMD13Q9UNM6 376 aa1.26□□□□□ -2.21
LTN1-206ENST00000486427 MPDZO75970 2070 aa1.25□□□□□ -2.21
LTN1-206ENST00000486427 ATG2BQ96BY7 2078 aa1.25□□□□□ -2.21
LTN1-206ENST00000486427 NPATQ14207 1427 aa1.25□□□□□ -2.21
LTN1-206ENST00000486427 UBFD1O14562 309 aaKnown RBP1.25□□□□□ -2.21
LTN1-206ENST00000486427 ARL6IP5O75915 188 aa1.25□□□□□ -2.21
LTN1-206ENST00000486427 PVALBP20472 110 aaPredicted RBP1.25□□□□□ -2.21
LTN1-206ENST00000486427 DAPP51397 102 aa1.25□□□□□ -2.21
LTN1-206ENST00000486427 ZNHIT3Q15649 155 aaPredicted RBP1.25□□□□□ -2.21
LTN1-206ENST00000486427 MESTQ5EB52 335 aa1.25□□□□□ -2.21
LTN1-206ENST00000486427 FAM45BPQ6NSW5 357 aa1.25□□□□□ -2.21
LTN1-206ENST00000486427 C2orf91Q6ZV80 131 aa1.25□□□□□ -2.21
LTN1-206ENST00000486427 CRLF3Q8IUI8 442 aa1.25□□□□□ -2.21
LTN1-206ENST00000486427 BOD1L2Q8IYS8 172 aa1.25□□□□□ -2.21
LTN1-206ENST00000486427 BLIDQ8IZY5 108 aa1.25□□□□□ -2.21
LTN1-206ENST00000486427 SYCE1Q8N0S2 351 aa1.25□□□□□ -2.21
LTN1-206ENST00000486427 NATD1Q8N6N6 113 aa1.25□□□□□ -2.21
LTN1-206ENST00000486427 STOML3Q8TAV4 291 aa1.25□□□□□ -2.21
LTN1-206ENST00000486427 OR51B6Q9H340 312 aa1.25□□□□□ -2.21
LTN1-206ENST00000486427 SNX12Q9UMY4 172 aa1.25□□□□□ -2.21
LTN1-206ENST00000486427 ARHGAP32A7KAX9 2087 aa1.25□□□□□ -2.21
LTN1-206ENST00000486427 RP1L1Q8IWN7 2480 aaPredicted RBP1.25□□□□□ -2.21
LTN1-206ENST00000486427 TMEM94Q12767 1356 aa1.24□□□□□ -2.21
LTN1-206ENST00000486427 IGHV3-15A0A0B4J1V0 119 aa1.24□□□□□ -2.21
LTN1-206ENST00000486427 IGKV2-29A2NJV5 120 aaPredicted RBP1.24□□□□□ -2.21
LTN1-206ENST00000486427 TMEM213A2RRL7 107 aa1.24□□□□□ -2.21
LTN1-206ENST00000486427 GRIFINA4D1Z8 144 aa1.24□□□□□ -2.21
LTN1-206ENST00000486427 F8VZ95 297 aa1.24□□□□□ -2.21
LTN1-206ENST00000486427 SMLR1H3BR10 107 aa1.24□□□□□ -2.21
LTN1-206ENST00000486427 SLC17A3O00476 420 aa1.24□□□□□ -2.21
LTN1-206ENST00000486427 ZW10O43264 779 aa1.24□□□□□ -2.21
LTN1-206ENST00000486427 NDUFS6O75380 124 aaKnown RBP1.24□□□□□ -2.21
LTN1-206ENST00000486427 STK16O75716 305 aa1.24□□□□□ -2.21
LTN1-206ENST00000486427 RD3LP0DJH9 198 aa1.24□□□□□ -2.21
LTN1-206ENST00000486427 DAD1P61803 113 aa1.24□□□□□ -2.21
LTN1-206ENST00000486427 PMS2P3Q13401 168 aa1.24□□□□□ -2.21
LTN1-206ENST00000486427 CLEC12BQ2HXU8 276 aa1.24□□□□□ -2.21
LTN1-206ENST00000486427 TBC1D28Q2M2D7 210 aa1.24□□□□□ -2.21
LTN1-206ENST00000486427 CHCHD2P9Q5T1J5 151 aaPredicted RBP1.24□□□□□ -2.21
LTN1-206ENST00000486427 N4BP2L1Q5TBK1 243 aaPredicted RBP1.24□□□□□ -2.21
LTN1-206ENST00000486427 ZNF283Q8N7M2 679 aa1.24□□□□□ -2.21
LTN1-206ENST00000486427 CCDC112Q8NEF3 446 aa1.24□□□□□ -2.21
LTN1-206ENST00000486427 ATP6V1C2Q8NEY4 427 aa1.24□□□□□ -2.21
LTN1-206ENST00000486427 OR4X1Q8NH49 305 aa1.24□□□□□ -2.21
LTN1-206ENST00000486427 LRRC45Q96CN5 670 aa1.24□□□□□ -2.21
LTN1-206ENST00000486427 OR7D2Q96RA2 312 aa1.24□□□□□ -2.21
LTN1-206ENST00000486427 GPR22Q99680 433 aa1.24□□□□□ -2.21
LTN1-206ENST00000486427 CHD2O14647 1828 aaKnown RBP1.24□□□□□ -2.21
LTN1-206ENST00000486427 PXDNLA1KZ92 1463 aa1.24□□□□□ -2.21
LTN1-206ENST00000486427 RTEL1-TNFRSF6BF6WH68 1400 aa1.23□□□□□ -2.21
LTN1-206ENST00000486427 IGLV3-9A0A075B6K5 115 aa1.23□□□□□ -2.21
LTN1-206ENST00000486427 TMEM235A6NFC5 223 aa1.23□□□□□ -2.21
LTN1-206ENST00000486427 TOX3O15405 576 aaPredicted RBP1.23□□□□□ -2.21
LTN1-206ENST00000486427 GNRH2O43555 120 aa1.23□□□□□ -2.21
LTN1-206ENST00000486427 HBZP02008 142 aa1.23□□□□□ -2.21
LTN1-206ENST00000486427 CFL1P23528 166 aaKnown RBP1.23□□□□□ -2.21
LTN1-206ENST00000486427 CRYBB3P26998 211 aa1.23□□□□□ -2.21
LTN1-206ENST00000486427 H2BFSP57053 126 aa1.23□□□□□ -2.21
LTN1-206ENST00000486427 ANGPT1Q15389 498 aa1.23□□□□□ -2.21
LTN1-206ENST00000486427 CLEC6AQ6EIG7 209 aa1.23□□□□□ -2.21
LTN1-206ENST00000486427 TMEM208Q9BTX3 173 aa1.23□□□□□ -2.21
LTN1-206ENST00000486427 EIF5A2Q9GZV4 153 aaKnown RBP1.23□□□□□ -2.21
LTN1-206ENST00000486427 SBDSQ9Y3A5 250 aaKnown RBP eCLIP1.23□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms