RNA–Protein interactions for RNA: ENST00000486204.5

SSR4-211, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 3

Gene SSR4, Length 658 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-211ENST00000486204 COMMD3Q9UBI1 195 aa10.32□□□□□ -0.76
SSR4-211ENST00000486204 SAA2-SAA4A0A096LPE2 208 aa10.31□□□□□ -0.76
SSR4-211ENST00000486204 ST8SIA5O15466 376 aa10.31□□□□□ -0.76
SSR4-211ENST00000486204 LANCL1O43813 399 aa10.31□□□□□ -0.76
SSR4-211ENST00000486204 HPGDSO60760 199 aa10.31□□□□□ -0.76
SSR4-211ENST00000486204 TSPAN9O75954 239 aa10.31□□□□□ -0.76
SSR4-211ENST00000486204 PRB2P02812 416 aaPredicted RBP10.31□□□□□ -0.76
SSR4-211ENST00000486204 GAPDHP04406 335 aaKnown RBP10.31□□□□□ -0.76
SSR4-211ENST00000486204 SNRNP70P08621 437 aaKnown RBP10.31□□□□□ -0.76
SSR4-211ENST00000486204 SAA2P0DJI9 122 aaPredicted RBP10.31□□□□□ -0.76
SSR4-211ENST00000486204 ELK1P19419 428 aa10.31□□□□□ -0.76
SSR4-211ENST00000486204 ZBTB25P24278 435 aa10.31□□□□□ -0.76
SSR4-211ENST00000486204 IL3RAP26951 378 aa10.31□□□□□ -0.76
SSR4-211ENST00000486204 BRS3P32247 399 aa10.31□□□□□ -0.76
SSR4-211ENST00000486204 TALDO1P37837 337 aa10.31□□□□□ -0.76
SSR4-211ENST00000486204 MNDAP41218 407 aa10.31□□□□□ -0.76
SSR4-211ENST00000486204 TAS2R20P59543 309 aa10.31□□□□□ -0.76
SSR4-211ENST00000486204 BEAN1Q3B7T3 259 aa10.31□□□□□ -0.76
SSR4-211ENST00000486204 ZNF833PQ6ZTB9 187 aa10.31□□□□□ -0.76
SSR4-211ENST00000486204 LYG1Q8N1E2 194 aa10.31□□□□□ -0.76
SSR4-211ENST00000486204 DTX3Q8N9I9 347 aa10.31□□□□□ -0.76
SSR4-211ENST00000486204 OR2AK2Q8NG84 335 aa10.31□□□□□ -0.76
SSR4-211ENST00000486204 FAM110DQ8TAY7 271 aaPredicted RBP10.31□□□□□ -0.76
SSR4-211ENST00000486204 S100A16Q96FQ6 103 aaKnown RBP10.31□□□□□ -0.76
SSR4-211ENST00000486204 ZNF251Q9BRH9 671 aa10.31□□□□□ -0.76
SSR4-211ENST00000486204 C11orf54Q9H0W9 315 aaPredicted RBP10.31□□□□□ -0.76
SSR4-211ENST00000486204 PITPNC1Q9UKF7 332 aa10.31□□□□□ -0.76
SSR4-211ENST00000486204 PLXNB1O43157 2135 aa10.3□□□□□ -0.76
SSR4-211ENST00000486204 TSPAN15O95858 294 aa10.3□□□□□ -0.76
SSR4-211ENST00000486204 CRYBA1P05813 215 aa10.3□□□□□ -0.76
SSR4-211ENST00000486204 CEACAM6P40199 344 aa10.3□□□□□ -0.76
SSR4-211ENST00000486204 OR3A3P47888 321 aa10.3□□□□□ -0.76
SSR4-211ENST00000486204 ARHGDIBP52566 201 aa10.3□□□□□ -0.76
SSR4-211ENST00000486204 KRTAP10-3P60369 221 aa10.3□□□□□ -0.76
SSR4-211ENST00000486204 EBI3Q14213 229 aa10.3□□□□□ -0.76
SSR4-211ENST00000486204 TMEM69Q5SWH9 247 aa10.3□□□□□ -0.76
SSR4-211ENST00000486204 REC114Q7Z4M0 266 aa10.3□□□□□ -0.76
SSR4-211ENST00000486204 THNSL2Q86YJ6 484 aa10.3□□□□□ -0.76
SSR4-211ENST00000486204 AP3S1Q92572 193 aa10.3□□□□□ -0.76
SSR4-211ENST00000486204 RBMXL1Q96E39 390 aaKnown RBP10.3□□□□□ -0.76
SSR4-211ENST00000486204 MIXL1Q9H2W2 232 aa10.3□□□□□ -0.76
SSR4-211ENST00000486204 C16orf95Q9H693 158 aa10.3□□□□□ -0.76
SSR4-211ENST00000486204 RANBP3Q9H6Z4 567 aaPredicted RBP10.3□□□□□ -0.76
SSR4-211ENST00000486204 RAB18Q9NP72 206 aa10.3□□□□□ -0.76
SSR4-211ENST00000486204 RDH8Q9NYR8 311 aa10.3□□□□□ -0.76
SSR4-211ENST00000486204 CCDC59Q9P031 241 aaKnown RBP10.3□□□□□ -0.76
SSR4-211ENST00000486204 IGHV3-72A0A0B4J1Y9 119 aa10.29□□□□□ -0.76
SSR4-211ENST00000486204 CLPSL1A2RUU4 121 aa10.29□□□□□ -0.76
SSR4-211ENST00000486204 ZNF736B4DX44 427 aaPredicted RBP10.29□□□□□ -0.76
SSR4-211ENST00000486204 G3V4G9 280 aa10.29□□□□□ -0.76
SSR4-211ENST00000486204 BET1O15155 118 aa10.29□□□□□ -0.76
SSR4-211ENST00000486204 HSPA12AO43301 675 aa10.29□□□□□ -0.76
SSR4-211ENST00000486204 TXNL1O43396 289 aa10.29□□□□□ -0.76
SSR4-211ENST00000486204 PROP1O75360 226 aa10.29□□□□□ -0.76
SSR4-211ENST00000486204 HLA-DQB1P01920 261 aa10.29□□□□□ -0.76
SSR4-211ENST00000486204 LSAMPQ13449 338 aa10.29□□□□□ -0.76
SSR4-211ENST00000486204 FAM71F2Q6NXP2 309 aa10.29□□□□□ -0.76
SSR4-211ENST00000486204 C16orf82Q7Z2V1 217 aa10.29□□□□□ -0.76
SSR4-211ENST00000486204 HOGA1Q86XE5 327 aa10.29□□□□□ -0.76
SSR4-211ENST00000486204 TGIF2LXQ8IUE1 241 aa10.29□□□□□ -0.76
SSR4-211ENST00000486204 H1FOOQ8IZA3 346 aaPredicted RBP10.29□□□□□ -0.76
SSR4-211ENST00000486204 Q8N6K4 173 aa10.29□□□□□ -0.76
SSR4-211ENST00000486204 GVQW1Q8N7I0 195 aa10.29□□□□□ -0.76
SSR4-211ENST00000486204 LINC01006Q8NI28 216 aa10.29□□□□□ -0.76
SSR4-211ENST00000486204 EDARADDQ8WWZ3 215 aa10.29□□□□□ -0.76
SSR4-211ENST00000486204 SNAPC3Q92966 411 aa10.29□□□□□ -0.76
SSR4-211ENST00000486204 ABHD14BQ96IU4 210 aa10.29□□□□□ -0.76
SSR4-211ENST00000486204 RBM14Q96PK6 669 aaKnown RBP10.29□□□□□ -0.76
SSR4-211ENST00000486204 NABP2Q9BQ15 211 aa10.29□□□□□ -0.76
SSR4-211ENST00000486204 ST6GALNAC5Q9BVH7 336 aa10.29□□□□□ -0.76
SSR4-211ENST00000486204 SLIRPQ9GZT3 109 aaKnown RBP10.29□□□□□ -0.76
SSR4-211ENST00000486204 ZNF702PQ9H963 129 aa10.29□□□□□ -0.76
SSR4-211ENST00000486204 ANXA10Q9UJ72 324 aa10.29□□□□□ -0.76
SSR4-211ENST00000486204 ANAPC10Q9UM13 185 aa10.29□□□□□ -0.76
SSR4-211ENST00000486204 TET2Q6N021 2002 aaPredicted RBP10.28□□□□□ -0.76
SSR4-211ENST00000486204 NOL3O60936 208 aaKnown RBP10.28□□□□□ -0.76
SSR4-211ENST00000486204 OR2F2O95006 317 aa10.28□□□□□ -0.76
SSR4-211ENST00000486204 IGKV1D-33P01593 117 aa10.28□□□□□ -0.76
SSR4-211ENST00000486204 IGKV1-33P01594 117 aa10.28□□□□□ -0.76
SSR4-211ENST00000486204 AMY1AP04745 511 aa10.28□□□□□ -0.76
SSR4-211ENST00000486204 AMY2AP04746 511 aa10.28□□□□□ -0.76
SSR4-211ENST00000486204 PROK1P58294 105 aa10.28□□□□□ -0.76
SSR4-211ENST00000486204 RPL39P5Q59GN2 51 aa10.28□□□□□ -0.76
SSR4-211ENST00000486204 MZT2AQ6P582 158 aa10.28□□□□□ -0.76
SSR4-211ENST00000486204 CNIH2Q6PI25 160 aa10.28□□□□□ -0.76
SSR4-211ENST00000486204 Q6ZS46 218 aa10.28□□□□□ -0.76
SSR4-211ENST00000486204 MOB3BQ86TA1 216 aa10.28□□□□□ -0.76
SSR4-211ENST00000486204 Q8N2B8 174 aa10.28□□□□□ -0.76
SSR4-211ENST00000486204 BEST4Q8NFU0 473 aa10.28□□□□□ -0.76
SSR4-211ENST00000486204 OR10J5Q8NHC4 309 aa10.28□□□□□ -0.76
SSR4-211ENST00000486204 MRAPQ8TCY5 172 aa10.28□□□□□ -0.76
SSR4-211ENST00000486204 CAPSLQ8WWF8 208 aa10.28□□□□□ -0.76
SSR4-211ENST00000486204 C5orf30Q96GV9 206 aa10.28□□□□□ -0.76
SSR4-211ENST00000486204 SLC25A33Q9BSK2 321 aa10.28□□□□□ -0.76
SSR4-211ENST00000486204 MRPL20Q9BYC9 149 aaKnown RBP10.28□□□□□ -0.76
SSR4-211ENST00000486204 NPFFR1Q9GZQ6 430 aa10.28□□□□□ -0.76
SSR4-211ENST00000486204 PIPOXQ9P0Z9 390 aa10.28□□□□□ -0.76
SSR4-211ENST00000486204 MEIS3P1A6NDR6 274 aa10.27□□□□□ -0.77
SSR4-211ENST00000486204 CTDSP2O14595 271 aa10.27□□□□□ -0.77
SSR4-211ENST00000486204 RAB29O14966 203 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms