RNA–Protein interactions for RNA: ENST00000485792.1

CUX1-208, Transcript of cut like homeobox 1, humanhuman

TSL 5

Gene CUX1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-208ENST00000485792 IGHV1-3A0A0C4DH29 117 aa4.53□□□□□ -1.68
CUX1-208ENST00000485792 BTBD17A6NE02 478 aa4.53□□□□□ -1.68
CUX1-208ENST00000485792 SERPINE3A8MV23 424 aa4.53□□□□□ -1.68
CUX1-208ENST00000485792 SDCBPO00560 298 aaPredicted RBP4.53□□□□□ -1.68
CUX1-208ENST00000485792 TIMM23O14925 209 aa4.53□□□□□ -1.68
CUX1-208ENST00000485792 SPINT2O43291 252 aa4.53□□□□□ -1.68
CUX1-208ENST00000485792 TXNL1O43396 289 aa4.53□□□□□ -1.68
CUX1-208ENST00000485792 IGHG2P01859 326 aa4.53□□□□□ -1.68
CUX1-208ENST00000485792 GAPDHP04406 335 aaKnown RBP4.53□□□□□ -1.68
CUX1-208ENST00000485792 CRYBA1P05813 215 aa4.53□□□□□ -1.68
CUX1-208ENST00000485792 CD36P16671 472 aa4.53□□□□□ -1.68
CUX1-208ENST00000485792 GADD45AP24522 165 aa4.53□□□□□ -1.68
CUX1-208ENST00000485792 BRS3P32247 399 aa4.53□□□□□ -1.68
CUX1-208ENST00000485792 SDC2P34741 201 aa4.53□□□□□ -1.68
CUX1-208ENST00000485792 VEGFCP49767 419 aa4.53□□□□□ -1.68
CUX1-208ENST00000485792 LINC00205P59089 165 aa4.53□□□□□ -1.68
CUX1-208ENST00000485792 SRSF3P84103 164 aaKnown RBP4.53□□□□□ -1.68
CUX1-208ENST00000485792 DYNC1I2Q13409 638 aaKnown RBP4.53□□□□□ -1.68
CUX1-208ENST00000485792 FAM189A2Q15884 450 aa4.53□□□□□ -1.68
CUX1-208ENST00000485792 ZNF124Q15973 351 aa4.53□□□□□ -1.68
CUX1-208ENST00000485792 HES5Q5TA89 166 aa4.53□□□□□ -1.68
CUX1-208ENST00000485792 DHRS7BQ6IAN0 325 aaPredicted RBP4.53□□□□□ -1.68
CUX1-208ENST00000485792 SFXN4Q6P4A7 337 aa4.53□□□□□ -1.68
CUX1-208ENST00000485792 Q6ZTK2 550 aa4.53□□□□□ -1.68
CUX1-208ENST00000485792 FAM71E2Q8N5Q1 922 aa4.53□□□□□ -1.68
CUX1-208ENST00000485792 C5orf56Q8N8D9 126 aa4.53□□□□□ -1.68
CUX1-208ENST00000485792 TSPAN14Q8NG11 270 aa4.53□□□□□ -1.68
CUX1-208ENST00000485792 OR13F1Q8NGS4 319 aa4.53□□□□□ -1.68
CUX1-208ENST00000485792 OR10R2Q8NGX6 335 aa4.53□□□□□ -1.68
CUX1-208ENST00000485792 CCDC107Q8WV48 283 aa4.53□□□□□ -1.68
CUX1-208ENST00000485792 GALMQ96C23 342 aa4.53□□□□□ -1.68
CUX1-208ENST00000485792 RITA1Q96K30 269 aa4.53□□□□□ -1.68
CUX1-208ENST00000485792 KCTD7Q96MP8 289 aa4.53□□□□□ -1.68
CUX1-208ENST00000485792 CABLES2Q9BTV7 478 aa4.53□□□□□ -1.68
CUX1-208ENST00000485792 CENPOQ9BU64 300 aa4.53□□□□□ -1.68
CUX1-208ENST00000485792 NPFFR1Q9GZQ6 430 aa4.53□□□□□ -1.68
CUX1-208ENST00000485792 IFI27L2Q9H2X8 130 aa4.53□□□□□ -1.68
CUX1-208ENST00000485792 PLGRKTQ9HBL7 147 aa4.53□□□□□ -1.68
CUX1-208ENST00000485792 PLEKHJ1Q9NW61 149 aa4.53□□□□□ -1.68
CUX1-208ENST00000485792 AK3Q9UIJ7 227 aa4.53□□□□□ -1.68
CUX1-208ENST00000485792 TRAPPC2LQ9UL33 140 aa4.53□□□□□ -1.68
CUX1-208ENST00000485792 MGAT4AQ9UM21 535 aa4.53□□□□□ -1.68
CUX1-208ENST00000485792 SSR3Q9UNL2 185 aa4.53□□□□□ -1.68
CUX1-208ENST00000485792 AMMECR1Q9Y4X0 333 aaPredicted RBP4.53□□□□□ -1.68
CUX1-208ENST00000485792 A0A0A6YYH2 397 aa4.52□□□□□ -1.69
CUX1-208ENST00000485792 A6NJ64 397 aa4.52□□□□□ -1.69
CUX1-208ENST00000485792 LINC01548A6NM66 108 aa4.52□□□□□ -1.69
CUX1-208ENST00000485792 M0QZK8 103 aa4.52□□□□□ -1.69
CUX1-208ENST00000485792 TOR1AO14656 332 aa4.52□□□□□ -1.69
CUX1-208ENST00000485792 HSD17B6O14756 317 aa4.52□□□□□ -1.69
CUX1-208ENST00000485792 TFAP2AP05549 437 aa4.52□□□□□ -1.69
CUX1-208ENST00000485792 SNRNP70P08621 437 aaKnown RBP4.52□□□□□ -1.69
CUX1-208ENST00000485792 CD3GP09693 182 aa4.52□□□□□ -1.69
CUX1-208ENST00000485792 PTHLHP12272 177 aa4.52□□□□□ -1.69
CUX1-208ENST00000485792 HIST1H1DP16402 221 aaKnown RBP4.52□□□□□ -1.69
CUX1-208ENST00000485792 DTYMKP23919 212 aa4.52□□□□□ -1.69
CUX1-208ENST00000485792 MYL9P24844 172 aa4.52□□□□□ -1.69
CUX1-208ENST00000485792 NFYBP25208 207 aa4.52□□□□□ -1.69
CUX1-208ENST00000485792 PSMB9P28065 219 aa4.52□□□□□ -1.69
CUX1-208ENST00000485792 RPS19P39019 145 aaKnown RBP4.52□□□□□ -1.69
CUX1-208ENST00000485792 ALDH3B2P48448 385 aa4.52□□□□□ -1.69
CUX1-208ENST00000485792 GNG10P50151 68 aa4.52□□□□□ -1.69
CUX1-208ENST00000485792 SSBP2P81877 361 aaPredicted RBP4.52□□□□□ -1.69
CUX1-208ENST00000485792 CD83Q01151 205 aa4.52□□□□□ -1.69
CUX1-208ENST00000485792 CTF1Q16619 201 aa4.52□□□□□ -1.69
CUX1-208ENST00000485792 LTC4SQ16873 150 aa4.52□□□□□ -1.69
CUX1-208ENST00000485792 MRGPRG-AS1Q2M3A8 158 aa4.52□□□□□ -1.69
CUX1-208ENST00000485792 ZNF260Q3ZCT1 412 aa4.52□□□□□ -1.69
CUX1-208ENST00000485792 TGIF2LXQ8IUE1 241 aa4.52□□□□□ -1.69
CUX1-208ENST00000485792 DRAM1Q8N682 238 aa4.52□□□□□ -1.69
CUX1-208ENST00000485792 RNF152Q8N8N0 203 aa4.52□□□□□ -1.69
CUX1-208ENST00000485792 Q8N9W7 124 aa4.52□□□□□ -1.69
CUX1-208ENST00000485792 OR8H1Q8NGG4 311 aa4.52□□□□□ -1.69
CUX1-208ENST00000485792 OR52L2PQ8NGH6 319 aa4.52□□□□□ -1.69
CUX1-208ENST00000485792 OR5AN1Q8NGI8 311 aa4.52□□□□□ -1.69
CUX1-208ENST00000485792 OR4A4PQ8NGN8 299 aa4.52□□□□□ -1.69
CUX1-208ENST00000485792 OR4C13Q8NGP0 309 aa4.52□□□□□ -1.69
CUX1-208ENST00000485792 OR5H6Q8NGV6 325 aa4.52□□□□□ -1.69
CUX1-208ENST00000485792 NDNFQ8TB73 568 aa4.52□□□□□ -1.69
CUX1-208ENST00000485792 TOMM40LQ969M1 308 aa4.52□□□□□ -1.69
CUX1-208ENST00000485792 RPEQ96AT9 228 aa4.52□□□□□ -1.69
CUX1-208ENST00000485792 RAB3CQ96E17 227 aa4.52□□□□□ -1.69
CUX1-208ENST00000485792 PRSS22Q9GZN4 317 aa4.52□□□□□ -1.69
CUX1-208ENST00000485792 ABCG5Q9H222 651 aa4.52□□□□□ -1.69
CUX1-208ENST00000485792 DCSTAMPQ9H295 470 aa4.52□□□□□ -1.69
CUX1-208ENST00000485792 C12orf4Q9NQ89 552 aa4.52□□□□□ -1.69
CUX1-208ENST00000485792 OR2S2Q9NQN1 319 aa4.52□□□□□ -1.69
CUX1-208ENST00000485792 OR1A1Q9P1Q5 309 aa4.52□□□□□ -1.69
CUX1-208ENST00000485792 SLC23A1Q9UHI7 598 aa4.52□□□□□ -1.69
CUX1-208ENST00000485792 ANAPC10Q9UM13 185 aa4.52□□□□□ -1.69
CUX1-208ENST00000485792 PLA2G2DQ9UNK4 145 aa4.52□□□□□ -1.69
CUX1-208ENST00000485792 ETV7Q9Y603 341 aa4.52□□□□□ -1.69
CUX1-208ENST00000485792 METTL21EPA6NDL7 271 aa4.51□□□□□ -1.69
CUX1-208ENST00000485792 DBX1A6NMT0 343 aa4.51□□□□□ -1.69
CUX1-208ENST00000485792 TRDCB7Z8K6 153 aa4.51□□□□□ -1.69
CUX1-208ENST00000485792 KCNAB3O43448 404 aa4.51□□□□□ -1.69
CUX1-208ENST00000485792 SSX5O60225 188 aa4.51□□□□□ -1.69
CUX1-208ENST00000485792 SCGNO76038 276 aa4.51□□□□□ -1.69
CUX1-208ENST00000485792 RGS11O94810 467 aa4.51□□□□□ -1.69
CUX1-208ENST00000485792 NDUFA3O95167 84 aa4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms