RNA–Protein interactions for RNA: ENST00000484763.1

VCPKMT-203, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 1 (best)

Gene VCPKMT, Length 1,849 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-203ENST00000484763 CT45A3Q8NHU0 189 aa16.75■□□□□ 0.27
VCPKMT-203ENST00000484763 OR51J1Q9H342 316 aa16.75■□□□□ 0.27
VCPKMT-203ENST00000484763 A0A096LNT2 108 aa16.74■□□□□ 0.27
VCPKMT-203ENST00000484763 A0A1W2PPE3 182 aa16.74■□□□□ 0.27
VCPKMT-203ENST00000484763 BCAP31P51572 246 aa16.74■□□□□ 0.27
VCPKMT-203ENST00000484763 C1orf122Q6ZSJ8 110 aa16.74■□□□□ 0.27
VCPKMT-203ENST00000484763 SLC25A48Q6ZT89 311 aaKnown RBP16.74■□□□□ 0.27
VCPKMT-203ENST00000484763 KRTAP1-3Q8IUG1 177 aa16.74■□□□□ 0.27
VCPKMT-203ENST00000484763 SGPP2Q8IWX5 399 aa16.74■□□□□ 0.27
VCPKMT-203ENST00000484763 DRAM1Q8N682 238 aa16.74■□□□□ 0.27
VCPKMT-203ENST00000484763 C8orf31Q8N9H6 132 aa16.74■□□□□ 0.27
VCPKMT-203ENST00000484763 ZBTB34Q8NCN2 500 aa16.74■□□□□ 0.27
VCPKMT-203ENST00000484763 ZNF431Q8TF32 576 aaPredicted RBP16.74■□□□□ 0.27
VCPKMT-203ENST00000484763 ABHD14BQ96IU4 210 aa16.74■□□□□ 0.27
VCPKMT-203ENST00000484763 METTL8Q9H825 291 aaKnown RBP16.74■□□□□ 0.27
VCPKMT-203ENST00000484763 KPTNQ9Y664 436 aa16.74■□□□□ 0.27
VCPKMT-203ENST00000484763 TEX13DA0A0J9YY54 714 aaPredicted RBP16.73■□□□□ 0.27
VCPKMT-203ENST00000484763 C9orf170A2RU37 121 aa16.73■□□□□ 0.27
VCPKMT-203ENST00000484763 GPR12P47775 334 aa16.73■□□□□ 0.27
VCPKMT-203ENST00000484763 SUPT4H1P63272 117 aaKnown RBP16.73■□□□□ 0.27
VCPKMT-203ENST00000484763 C11orf88Q6PI97 169 aa16.73■□□□□ 0.27
VCPKMT-203ENST00000484763 BTNL3Q6UXE8 466 aa16.73■□□□□ 0.27
VCPKMT-203ENST00000484763 Q8N7P7 452 aa16.73■□□□□ 0.27
VCPKMT-203ENST00000484763 NAA60Q9H7X0 242 aa16.73■□□□□ 0.27
VCPKMT-203ENST00000484763 LPAR2Q9HBW0 351 aa16.73■□□□□ 0.27
VCPKMT-203ENST00000484763 MMP26Q9NRE1 261 aa16.73■□□□□ 0.27
VCPKMT-203ENST00000484763 CD34P28906 385 aa16.73■□□□□ 0.27
VCPKMT-203ENST00000484763 OR9G1Q8NH87 305 aa16.73■□□□□ 0.27
VCPKMT-203ENST00000484763 ITPR2Q14571 2701 aa16.72■□□□□ 0.27
VCPKMT-203ENST00000484763 MPPED1O15442 326 aa16.72■□□□□ 0.27
VCPKMT-203ENST00000484763 TNFSF12O43508 249 aa16.72■□□□□ 0.27
VCPKMT-203ENST00000484763 SFT2D2O95562 160 aa16.72■□□□□ 0.27
VCPKMT-203ENST00000484763 LOXL1Q08397 574 aaPredicted RBP16.72■□□□□ 0.27
VCPKMT-203ENST00000484763 TBC1D26Q86UD7 250 aa16.72■□□□□ 0.27
VCPKMT-203ENST00000484763 ABHD12Q8N2K0 398 aa16.72■□□□□ 0.27
VCPKMT-203ENST00000484763 LINC00311Q8N616 119 aa16.72■□□□□ 0.27
VCPKMT-203ENST00000484763 ZNF596Q8TC21 504 aa16.72■□□□□ 0.27
VCPKMT-203ENST00000484763 Q96MF0 132 aa16.72■□□□□ 0.27
VCPKMT-203ENST00000484763 SDHAF2Q9NX18 166 aa16.72■□□□□ 0.27
VCPKMT-203ENST00000484763 IGHV2-26A0A0B4J1V2 119 aa16.71■□□□□ 0.27
VCPKMT-203ENST00000484763 J3QR06 171 aa16.71■□□□□ 0.27
VCPKMT-203ENST00000484763 SSNA1O43805 119 aa16.71■□□□□ 0.27
VCPKMT-203ENST00000484763 PGLYRP1O75594 196 aaPredicted RBP16.71■□□□□ 0.27
VCPKMT-203ENST00000484763 LYG1Q8N1E2 194 aa16.71■□□□□ 0.27
VCPKMT-203ENST00000484763 ZNF436-AS1Q8NC38 126 aaPredicted RBP16.71■□□□□ 0.27
VCPKMT-203ENST00000484763 CASTOR1Q8WTX7 329 aa16.71■□□□□ 0.27
VCPKMT-203ENST00000484763 GALNT14Q96FL9 552 aa16.71■□□□□ 0.27
VCPKMT-203ENST00000484763 C5orf30Q96GV9 206 aa16.71■□□□□ 0.27
VCPKMT-203ENST00000484763 CLEC7AQ9BXN2 247 aa16.71■□□□□ 0.27
VCPKMT-203ENST00000484763 PIPOXQ9P0Z9 390 aa16.71■□□□□ 0.27
VCPKMT-203ENST00000484763 KCNIP3Q9Y2W7 256 aa16.71■□□□□ 0.27
VCPKMT-203ENST00000484763 MED13LQ71F56 2210 aa16.71■□□□□ 0.27
VCPKMT-203ENST00000484763 PDZD2O15018 2839 aa16.71■□□□□ 0.26
VCPKMT-203ENST00000484763 RAB29O14966 203 aa16.7■□□□□ 0.26
VCPKMT-203ENST00000484763 DUS4LO95620 317 aaKnown RBP16.7■□□□□ 0.26
VCPKMT-203ENST00000484763 IFNA2P01563 188 aa16.7■□□□□ 0.26
VCPKMT-203ENST00000484763 ANXA3P12429 323 aa16.7■□□□□ 0.26
VCPKMT-203ENST00000484763 PRTN3P24158 256 aa16.7■□□□□ 0.26
VCPKMT-203ENST00000484763 DVL1P1P54792 670 aaPredicted RBP16.7■□□□□ 0.26
VCPKMT-203ENST00000484763 SLC9A3R2Q15599 337 aa16.7■□□□□ 0.26
VCPKMT-203ENST00000484763 OR13D1Q8NGV5 346 aa16.7■□□□□ 0.26
VCPKMT-203ENST00000484763 TNFRSF14Q92956 283 aa16.7■□□□□ 0.26
VCPKMT-203ENST00000484763 C1orf159Q96HA4 380 aa16.7■□□□□ 0.26
VCPKMT-203ENST00000484763 REG4Q9BYZ8 158 aa16.7■□□□□ 0.26
VCPKMT-203ENST00000484763 SIRPDQ9H106 197 aa16.7■□□□□ 0.26
VCPKMT-203ENST00000484763 UNKLQ9H9P5 680 aaKnown RBP16.7■□□□□ 0.26
VCPKMT-203ENST00000484763 SIRT7Q9NRC8 400 aa16.7■□□□□ 0.26
VCPKMT-203ENST00000484763 GAB2Q9UQC2 676 aa16.7■□□□□ 0.26
VCPKMT-203ENST00000484763 MAP1AP78559 2803 aaPredicted RBP16.7■□□□□ 0.26
VCPKMT-203ENST00000484763 SAA2-SAA4A0A096LPE2 208 aa16.7■□□□□ 0.26
VCPKMT-203ENST00000484763 B4DSR2 109 aa16.7■□□□□ 0.26
VCPKMT-203ENST00000484763 RNF223E7ERA6 249 aa16.7■□□□□ 0.26
VCPKMT-203ENST00000484763 MSMBP08118 114 aa16.7■□□□□ 0.26
VCPKMT-203ENST00000484763 SAA2P0DJI9 122 aaPredicted RBP16.7■□□□□ 0.26
VCPKMT-203ENST00000484763 DLX1P56177 255 aa16.7■□□□□ 0.26
VCPKMT-203ENST00000484763 RRAS2P62070 204 aaPredicted RBP16.7■□□□□ 0.26
VCPKMT-203ENST00000484763 KCTD9Q7L273 389 aa16.7■□□□□ 0.26
VCPKMT-203ENST00000484763 ODF3L1Q8IXM7 274 aa16.7■□□□□ 0.26
VCPKMT-203ENST00000484763 OR10X1Q8NGY0 326 aa16.7■□□□□ 0.26
VCPKMT-203ENST00000484763 MITD1Q8WV92 249 aa16.7■□□□□ 0.26
VCPKMT-203ENST00000484763 GPHA2Q96T91 129 aa16.7■□□□□ 0.26
VCPKMT-203ENST00000484763 PHB2Q99623 299 aa16.7■□□□□ 0.26
VCPKMT-203ENST00000484763 FOXC2Q99958 501 aa16.7■□□□□ 0.26
VCPKMT-203ENST00000484763 MED28Q9H204 178 aa16.7■□□□□ 0.26
VCPKMT-203ENST00000484763 INSIG2Q9Y5U4 225 aa16.7■□□□□ 0.26
VCPKMT-203ENST00000484763 C3orf85A0A1B0GTC6 90 aa16.69■□□□□ 0.26
VCPKMT-203ENST00000484763 RNF212BA8MTL3 300 aa16.69■□□□□ 0.26
VCPKMT-203ENST00000484763 TOR1AO14656 332 aa16.69■□□□□ 0.26
VCPKMT-203ENST00000484763 VMO1Q7Z5L0 202 aa16.69■□□□□ 0.26
VCPKMT-203ENST00000484763 C12orf45Q8N5I9 185 aaPredicted RBP16.69■□□□□ 0.26
VCPKMT-203ENST00000484763 ZNRD1Q9P1U0 126 aa16.69■□□□□ 0.26
VCPKMT-203ENST00000484763 CSMD1Q96PZ7 3565 aa16.69■□□□□ 0.26
VCPKMT-203ENST00000484763 WNK2Q9Y3S1 2297 aa16.69■□□□□ 0.26
VCPKMT-203ENST00000484763 OR5AC1P0C628 307 aa16.68■□□□□ 0.26
VCPKMT-203ENST00000484763 COX7A1P24310 79 aa16.68■□□□□ 0.26
VCPKMT-203ENST00000484763 F2RP25116 425 aa16.68■□□□□ 0.26
VCPKMT-203ENST00000484763 PRRX1P54821 245 aa16.68■□□□□ 0.26
VCPKMT-203ENST00000484763 EIF4EBP1Q13541 118 aaPredicted RBP16.68■□□□□ 0.26
VCPKMT-203ENST00000484763 RPL39P5Q59GN2 51 aa16.68■□□□□ 0.26
VCPKMT-203ENST00000484763 OR51H1Q8NH63 302 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms