RNA–Protein interactions for RNA: ENST00000482965.1

SNX4-205, Transcript of sorting nexin 4, humanhuman

TSL 3

Gene SNX4, Length 578 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4-205ENST00000482965 PARP12Q9H0J9 701 aaKnown RBP7.02□□□□□ -1.29
SNX4-205ENST00000482965 ABCG5Q9H222 651 aa7.02□□□□□ -1.29
SNX4-205ENST00000482965 DCSTAMPQ9H295 470 aa7.02□□□□□ -1.29
SNX4-205ENST00000482965 IFI27L2Q9H2X8 130 aa7.02□□□□□ -1.29
SNX4-205ENST00000482965 ZNF702PQ9H963 129 aa7.02□□□□□ -1.29
SNX4-205ENST00000482965 PIPOXQ9P0Z9 390 aa7.02□□□□□ -1.29
SNX4-205ENST00000482965 SIGLEC9Q9Y336 463 aa7.02□□□□□ -1.29
SNX4-205ENST00000482965 SAA2-SAA4A0A096LPE2 208 aa7.01□□□□□ -1.29
SNX4-205ENST00000482965 RAB29O14966 203 aa7.01□□□□□ -1.29
SNX4-205ENST00000482965 NOL3O60936 208 aaKnown RBP7.01□□□□□ -1.29
SNX4-205ENST00000482965 SAA2P0DJI9 122 aaPredicted RBP7.01□□□□□ -1.29
SNX4-205ENST00000482965 CD1BP29016 333 aa7.01□□□□□ -1.29
SNX4-205ENST00000482965 OR3A3P47888 321 aa7.01□□□□□ -1.29
SNX4-205ENST00000482965 SMCPP49901 116 aaPredicted RBP7.01□□□□□ -1.29
SNX4-205ENST00000482965 PROK1P58294 105 aa7.01□□□□□ -1.29
SNX4-205ENST00000482965 BLCAPP62952 87 aa7.01□□□□□ -1.29
SNX4-205ENST00000482965 HABP2Q14520 560 aaPredicted RBP7.01□□□□□ -1.29
SNX4-205ENST00000482965 HERPUD1Q15011 391 aa7.01□□□□□ -1.29
SNX4-205ENST00000482965 SRSF7Q16629 238 aaKnown RBP eCLIP7.01□□□□□ -1.29
SNX4-205ENST00000482965 IGSF11Q5DX21 431 aa7.01□□□□□ -1.29
SNX4-205ENST00000482965 MZT2AQ6P582 158 aa7.01□□□□□ -1.29
SNX4-205ENST00000482965 Q6ZS49 121 aa7.01□□□□□ -1.29
SNX4-205ENST00000482965 ODF3L1Q8IXM7 274 aa7.01□□□□□ -1.29
SNX4-205ENST00000482965 OR2T10Q8NGZ9 312 aa7.01□□□□□ -1.29
SNX4-205ENST00000482965 OR10J5Q8NHC4 309 aa7.01□□□□□ -1.29
SNX4-205ENST00000482965 ACOT12Q8WYK0 555 aa7.01□□□□□ -1.29
SNX4-205ENST00000482965 AP3S1Q92572 193 aa7.01□□□□□ -1.29
SNX4-205ENST00000482965 EAF1Q96JC9 268 aaPredicted RBP7.01□□□□□ -1.29
SNX4-205ENST00000482965 S1PR3Q99500 378 aa7.01□□□□□ -1.29
SNX4-205ENST00000482965 GINS4Q9BRT9 223 aa7.01□□□□□ -1.29
SNX4-205ENST00000482965 ST6GALNAC5Q9BVH7 336 aa7.01□□□□□ -1.29
SNX4-205ENST00000482965 MRPL20Q9BYC9 149 aaKnown RBP7.01□□□□□ -1.29
SNX4-205ENST00000482965 C11orf54Q9H0W9 315 aaPredicted RBP7.01□□□□□ -1.29
SNX4-205ENST00000482965 AUNIPQ9H7T9 357 aa7.01□□□□□ -1.29
SNX4-205ENST00000482965 RDH8Q9NYR8 311 aa7.01□□□□□ -1.29
SNX4-205ENST00000482965 COMMD3Q9UBI1 195 aa7.01□□□□□ -1.29
SNX4-205ENST00000482965 SCOCQ9UIL1 159 aa7.01□□□□□ -1.29
SNX4-205ENST00000482965 ZNF221Q9UK13 617 aa7.01□□□□□ -1.29
SNX4-205ENST00000482965 MOB4Q9Y3A3 225 aa7.01□□□□□ -1.29
SNX4-205ENST00000482965 IGKV1D-8A0A087WSZ0 117 aa7□□□□□ -1.29
SNX4-205ENST00000482965 TRBV6-7A0A0A0MS04 114 aa7□□□□□ -1.29
SNX4-205ENST00000482965 ZNF736B4DX44 427 aaPredicted RBP7□□□□□ -1.29
SNX4-205ENST00000482965 M0QZK8 103 aa7□□□□□ -1.29
SNX4-205ENST00000482965 XRCC3O43542 346 aa7□□□□□ -1.29
SNX4-205ENST00000482965 SSX5O60225 188 aa7□□□□□ -1.29
SNX4-205ENST00000482965 PEX14O75381 377 aa7□□□□□ -1.29
SNX4-205ENST00000482965 DIRAS3O95661 229 aa7□□□□□ -1.29
SNX4-205ENST00000482965 MOSP00540 346 aa7□□□□□ -1.29
SNX4-205ENST00000482965 EIF4EP06730 217 aaKnown RBP7□□□□□ -1.29
SNX4-205ENST00000482965 ZNF182P17025 639 aaPredicted RBP7□□□□□ -1.29
SNX4-205ENST00000482965 VDAC2P45880 294 aaPredicted RBP7□□□□□ -1.29
SNX4-205ENST00000482965 GPR12P47775 334 aa7□□□□□ -1.29
SNX4-205ENST00000482965 LSAMPQ13449 338 aa7□□□□□ -1.29
SNX4-205ENST00000482965 EBI3Q14213 229 aa7□□□□□ -1.29
SNX4-205ENST00000482965 ABCA11PQ4W5N1 156 aa7□□□□□ -1.29
SNX4-205ENST00000482965 RPL39P5Q59GN2 51 aa7□□□□□ -1.29
SNX4-205ENST00000482965 C9orf152Q5JTZ5 239 aa7□□□□□ -1.29
SNX4-205ENST00000482965 TMEM69Q5SWH9 247 aa7□□□□□ -1.29
SNX4-205ENST00000482965 FAM71F2Q6NXP2 309 aa7□□□□□ -1.29
SNX4-205ENST00000482965 C11orf88Q6PI97 169 aa7□□□□□ -1.29
SNX4-205ENST00000482965 ZNF833PQ6ZTB9 187 aa7□□□□□ -1.29
SNX4-205ENST00000482965 Q8N2B8 174 aa7□□□□□ -1.29
SNX4-205ENST00000482965 RAB2BQ8WUD1 216 aa7□□□□□ -1.29
SNX4-205ENST00000482965 ABHD14BQ96IU4 210 aa7□□□□□ -1.29
SNX4-205ENST00000482965 NABP2Q9BQ15 211 aa7□□□□□ -1.29
SNX4-205ENST00000482965 GHITMQ9H3K2 345 aa7□□□□□ -1.29
SNX4-205ENST00000482965 PGPEP1Q9NXJ5 209 aa7□□□□□ -1.29
SNX4-205ENST00000482965 RNF150Q9ULK6 438 aa7□□□□□ -1.29
SNX4-205ENST00000482965 RBM7Q9Y580 266 aaKnown RBP7□□□□□ -1.29
SNX4-205ENST00000482965 TET2Q6N021 2002 aaPredicted RBP7□□□□□ -1.29
SNX4-205ENST00000482965 SMIM31A0A1B0GVY4 71 aa6.99□□□□□ -1.29
SNX4-205ENST00000482965 SH2D7A6NKC9 451 aaPredicted RBP6.99□□□□□ -1.29
SNX4-205ENST00000482965 NCBP2LA6PVI3 153 aaKnown RBP6.99□□□□□ -1.29
SNX4-205ENST00000482965 FAM25AB3EWG3 89 aa6.99□□□□□ -1.29
SNX4-205ENST00000482965 FAM25CB3EWG5 89 aa6.99□□□□□ -1.29
SNX4-205ENST00000482965 FAM25GB3EWG6 89 aa6.99□□□□□ -1.29
SNX4-205ENST00000482965 HPGDSO60760 199 aa6.99□□□□□ -1.29
SNX4-205ENST00000482965 APOA1P02647 267 aa6.99□□□□□ -1.29
SNX4-205ENST00000482965 CTXN2P0C2S0 81 aa6.99□□□□□ -1.29
SNX4-205ENST00000482965 OR8U9P0C7N5 309 aa6.99□□□□□ -1.29
SNX4-205ENST00000482965 VSIG10L2P0DP72 767 aa6.99□□□□□ -1.29
SNX4-205ENST00000482965 PTHLHP12272 177 aa6.99□□□□□ -1.29
SNX4-205ENST00000482965 SOX6P35712 828 aa6.99□□□□□ -1.29
SNX4-205ENST00000482965 CBX5P45973 191 aa6.99□□□□□ -1.29
SNX4-205ENST00000482965 TMBIM6P55061 237 aa6.99□□□□□ -1.29
SNX4-205ENST00000482965 TAS2R20P59543 309 aa6.99□□□□□ -1.29
SNX4-205ENST00000482965 ARPC4P59998 168 aa6.99□□□□□ -1.29
SNX4-205ENST00000482965 SRSF4Q08170 494 aaKnown RBP6.99□□□□□ -1.29
SNX4-205ENST00000482965 SPCS2Q15005 226 aa6.99□□□□□ -1.29
SNX4-205ENST00000482965 TMEM95Q3KNT9 176 aa6.99□□□□□ -1.29
SNX4-205ENST00000482965 CNIH2Q6PI25 160 aa6.99□□□□□ -1.29
SNX4-205ENST00000482965 Q6ZS46 218 aa6.99□□□□□ -1.29
SNX4-205ENST00000482965 KLHDC1Q8N7A1 406 aa6.99□□□□□ -1.29
SNX4-205ENST00000482965 C5orf56Q8N8D9 126 aa6.99□□□□□ -1.29
SNX4-205ENST00000482965 BEST4Q8NFU0 473 aa6.99□□□□□ -1.29
SNX4-205ENST00000482965 OR8U1Q8NH10 309 aa6.99□□□□□ -1.29
SNX4-205ENST00000482965 CMTM3Q96MX0 182 aa6.99□□□□□ -1.29
SNX4-205ENST00000482965 BCL7BQ9BQE9 202 aa6.99□□□□□ -1.29
SNX4-205ENST00000482965 AGMATQ9BSE5 352 aa6.99□□□□□ -1.29
SNX4-205ENST00000482965 TOLLIPQ9H0E2 274 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms