RNA–Protein interactions for RNA: ENST00000480127.1

COL17A1-205, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 3

Gene COL17A1, Length 420 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-205ENST00000480127 GINS4Q9BRT9 223 aa5.55□□□□□ -1.52
COL17A1-205ENST00000480127 ELOVL1Q9BW60 279 aa5.55□□□□□ -1.52
COL17A1-205ENST00000480127 ANKRD60Q9BZ19 345 aa5.55□□□□□ -1.52
COL17A1-205ENST00000480127 OR51J1Q9H342 316 aa5.55□□□□□ -1.52
COL17A1-205ENST00000480127 RIMS4Q9H426 269 aaPredicted RBP5.55□□□□□ -1.52
COL17A1-205ENST00000480127 PALMDQ9NP74 551 aa5.55□□□□□ -1.52
COL17A1-205ENST00000480127 PIPOXQ9P0Z9 390 aa5.55□□□□□ -1.52
COL17A1-205ENST00000480127 RCC2Q9P258 522 aaKnown RBP5.55□□□□□ -1.52
COL17A1-205ENST00000480127 PSORS1C1Q9UIG5 152 aa5.55□□□□□ -1.52
COL17A1-205ENST00000480127 ZNF256Q9Y2P7 627 aaPredicted RBP5.55□□□□□ -1.52
COL17A1-205ENST00000480127 LCE6AA0A183 80 aa5.54□□□□□ -1.52
COL17A1-205ENST00000480127 C13orf42A0A1B0GVH6 325 aa5.54□□□□□ -1.52
COL17A1-205ENST00000480127 G3V318 75 aa5.54□□□□□ -1.52
COL17A1-205ENST00000480127 BET1O15155 118 aa5.54□□□□□ -1.52
COL17A1-205ENST00000480127 MPPED1O15442 326 aa5.54□□□□□ -1.52
COL17A1-205ENST00000480127 RGS10O43665 173 aa5.54□□□□□ -1.52
COL17A1-205ENST00000480127 YPEL1O60688 119 aa5.54□□□□□ -1.52
COL17A1-205ENST00000480127 CDK1P06493 297 aa5.54□□□□□ -1.52
COL17A1-205ENST00000480127 SRMP19623 302 aa5.54□□□□□ -1.52
COL17A1-205ENST00000480127 GADD45AP24522 165 aa5.54□□□□□ -1.52
COL17A1-205ENST00000480127 MYL9P24844 172 aa5.54□□□□□ -1.52
COL17A1-205ENST00000480127 CALRP27797 417 aaKnown RBP5.54□□□□□ -1.52
COL17A1-205ENST00000480127 MC5RP33032 325 aa5.54□□□□□ -1.52
COL17A1-205ENST00000480127 INSL3P51460 131 aa5.54□□□□□ -1.52
COL17A1-205ENST00000480127 ZNF134P52741 427 aa5.54□□□□□ -1.52
COL17A1-205ENST00000480127 RPS11P62280 158 aaKnown RBP eCLIP5.54□□□□□ -1.52
COL17A1-205ENST00000480127 RPS27AP62979 156 aaKnown RBP5.54□□□□□ -1.52
COL17A1-205ENST00000480127 PITPNAQ00169 270 aa5.54□□□□□ -1.52
COL17A1-205ENST00000480127 C5orf64Q2M2E5 130 aa5.54□□□□□ -1.52
COL17A1-205ENST00000480127 ACTBL2Q562R1 376 aa5.54□□□□□ -1.52
COL17A1-205ENST00000480127 RPL39P5Q59GN2 51 aa5.54□□□□□ -1.52
COL17A1-205ENST00000480127 PYHIN1Q6K0P9 492 aa5.54□□□□□ -1.52
COL17A1-205ENST00000480127 UNQ5815/PRO19632Q6UWF5 114 aa5.54□□□□□ -1.52
COL17A1-205ENST00000480127 GLDNQ6ZMI3 551 aaPredicted RBP5.54□□□□□ -1.52
COL17A1-205ENST00000480127 ZNF429Q86V71 674 aa5.54□□□□□ -1.52
COL17A1-205ENST00000480127 FAM71E2Q8N5Q1 922 aa5.54□□□□□ -1.52
COL17A1-205ENST00000480127 NANOGP1Q8N7R0 232 aa5.54□□□□□ -1.52
COL17A1-205ENST00000480127 OR6M1Q8NGM8 313 aa5.54□□□□□ -1.52
COL17A1-205ENST00000480127 PHYHIPQ92561 330 aa5.54□□□□□ -1.52
COL17A1-205ENST00000480127 MS4A10Q96PG2 267 aa5.54□□□□□ -1.52
COL17A1-205ENST00000480127 YPEL2Q96QA6 119 aa5.54□□□□□ -1.52
COL17A1-205ENST00000480127 TSNAXQ99598 290 aaKnown RBP5.54□□□□□ -1.52
COL17A1-205ENST00000480127 CMSS1Q9BQ75 279 aaKnown RBP5.54□□□□□ -1.52
COL17A1-205ENST00000480127 SULT4A1Q9BR01 284 aa5.54□□□□□ -1.52
COL17A1-205ENST00000480127 KRTAP17-1Q9BYP8 105 aa5.54□□□□□ -1.52
COL17A1-205ENST00000480127 FBXL15Q9H469 300 aa5.54□□□□□ -1.52
COL17A1-205ENST00000480127 ISYNA1Q9NPH2 558 aa5.54□□□□□ -1.52
COL17A1-205ENST00000480127 C12orf4Q9NQ89 552 aa5.54□□□□□ -1.52
COL17A1-205ENST00000480127 METTL1Q9UBP6 276 aaKnown RBP5.54□□□□□ -1.52
COL17A1-205ENST00000480127 FOXA2Q9Y261 457 aaPredicted RBP5.54□□□□□ -1.52
COL17A1-205ENST00000480127 WASHC3Q9Y3C0 194 aa5.54□□□□□ -1.52
COL17A1-205ENST00000480127 OR5H14A6NHG9 310 aa5.53□□□□□ -1.52
COL17A1-205ENST00000480127 LINC01619G3V211 115 aa5.53□□□□□ -1.52
COL17A1-205ENST00000480127 M0R1X1 148 aa5.53□□□□□ -1.52
COL17A1-205ENST00000480127 RRHO14718 337 aa5.53□□□□□ -1.52
COL17A1-205ENST00000480127 PDCD5O14737 125 aa5.53□□□□□ -1.52
COL17A1-205ENST00000480127 OVOL1O14753 267 aa5.53□□□□□ -1.52
COL17A1-205ENST00000480127 SLC22A1O15245 554 aa5.53□□□□□ -1.52
COL17A1-205ENST00000480127 RBBP9O75884 186 aa5.53□□□□□ -1.52
COL17A1-205ENST00000480127 ACTL6BO94805 426 aa5.53□□□□□ -1.52
COL17A1-205ENST00000480127 IGHV3-11P01762 117 aa5.53□□□□□ -1.52
COL17A1-205ENST00000480127 HLA-DRB1P01911 266 aa5.53□□□□□ -1.52
COL17A1-205ENST00000480127 IGF1P05019 195 aa5.53□□□□□ -1.52
COL17A1-205ENST00000480127 TFAP2AP05549 437 aa5.53□□□□□ -1.52
COL17A1-205ENST00000480127 CD1AP06126 327 aa5.53□□□□□ -1.52
COL17A1-205ENST00000480127 PSMA1P25786 263 aaKnown RBP5.53□□□□□ -1.52
COL17A1-205ENST00000480127 CNTFRP26992 372 aa5.53□□□□□ -1.52
COL17A1-205ENST00000480127 CHATP28329 748 aa5.53□□□□□ -1.52
COL17A1-205ENST00000480127 VEGFCP49767 419 aa5.53□□□□□ -1.52
COL17A1-205ENST00000480127 RAB9AP51151 201 aa5.53□□□□□ -1.52
COL17A1-205ENST00000480127 PSMD7P51665 324 aa5.53□□□□□ -1.52
COL17A1-205ENST00000480127 ZNF137PP52743 207 aa5.53□□□□□ -1.52
COL17A1-205ENST00000480127 ARFRP1Q13795 201 aa5.53□□□□□ -1.52
COL17A1-205ENST00000480127 INSL4Q14641 139 aa5.53□□□□□ -1.52
COL17A1-205ENST00000480127 TRAM1Q15629 374 aa5.53□□□□□ -1.52
COL17A1-205ENST00000480127 SRSF7Q16629 238 aaKnown RBP eCLIP5.53□□□□□ -1.52
COL17A1-205ENST00000480127 PPP1R27Q86WC6 154 aa5.53□□□□□ -1.52
COL17A1-205ENST00000480127 ANKRD13BQ86YJ7 626 aa5.53□□□□□ -1.52
COL17A1-205ENST00000480127 Q8N6K4 173 aa5.53□□□□□ -1.52
COL17A1-205ENST00000480127 DRAXINQ8NBI3 349 aaPredicted RBP5.53□□□□□ -1.52
COL17A1-205ENST00000480127 ZNF439Q8NDP4 499 aa5.53□□□□□ -1.52
COL17A1-205ENST00000480127 OR56B1Q8NGI3 324 aa5.53□□□□□ -1.52
COL17A1-205ENST00000480127 OR6Q1Q8NGQ2 317 aa5.53□□□□□ -1.52
COL17A1-205ENST00000480127 CASTOR1Q8WTX7 329 aa5.53□□□□□ -1.52
COL17A1-205ENST00000480127 ST6GALNAC6Q969X2 333 aa5.53□□□□□ -1.52
COL17A1-205ENST00000480127 FLYWCH2Q96CP2 140 aaKnown RBP5.53□□□□□ -1.52
COL17A1-205ENST00000480127 RBMXL1Q96E39 390 aaKnown RBP5.53□□□□□ -1.52
COL17A1-205ENST00000480127 ABHD14BQ96IU4 210 aa5.53□□□□□ -1.52
COL17A1-205ENST00000480127 UBE2E2Q96LR5 201 aa5.53□□□□□ -1.52
COL17A1-205ENST00000480127 NABP2Q9BQ15 211 aa5.53□□□□□ -1.52
COL17A1-205ENST00000480127 DCUN1D5Q9BTE7 237 aa5.53□□□□□ -1.52
COL17A1-205ENST00000480127 KCNK15Q9H427 330 aa5.53□□□□□ -1.52
COL17A1-205ENST00000480127 ZMAT4Q9H898 229 aa5.53□□□□□ -1.52
COL17A1-205ENST00000480127 PLCXD1Q9NUJ7 323 aa5.53□□□□□ -1.52
COL17A1-205ENST00000480127 BLOC1S6Q9UL45 172 aa5.53□□□□□ -1.52
COL17A1-205ENST00000480127 AK6Q9Y3D8 172 aaKnown RBP5.53□□□□□ -1.52
COL17A1-205ENST00000480127 SMAD5-AS1Q9Y6J3 95 aa5.53□□□□□ -1.52
COL17A1-205ENST00000480127 SORL1Q92673 2214 aa5.52□□□□□ -1.53
COL17A1-205ENST00000480127 METTL21EPA6NDL7 271 aa5.52□□□□□ -1.53
COL17A1-205ENST00000480127 ANKRD65E5RJM6 399 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms