RNA–Protein interactions for RNA: ENST00000478050.1

SF3B6-202, Transcript of splicing factor 3b subunit 6, humanhuman

TSL 2

Gene SF3B6, Length 720 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-202ENST00000478050 KHDC1LQ5JSQ8 128 aa4.18□□□□□ -1.74
SF3B6-202ENST00000478050 AVPI1Q5T686 147 aa4.18□□□□□ -1.74
SF3B6-202ENST00000478050 FBXW9Q5XUX1 488 aa4.18□□□□□ -1.74
SF3B6-202ENST00000478050 TMEM88Q6PEY1 159 aa4.18□□□□□ -1.74
SF3B6-202ENST00000478050 ZNF818PQ6ZRF7 136 aa4.18□□□□□ -1.74
SF3B6-202ENST00000478050 LINC00696Q6ZRV3 163 aa4.18□□□□□ -1.74
SF3B6-202ENST00000478050 CBLN2Q8IUK8 224 aa4.18□□□□□ -1.74
SF3B6-202ENST00000478050 Q8IYB0 196 aa4.18□□□□□ -1.74
SF3B6-202ENST00000478050 H1FOOQ8IZA3 346 aaPredicted RBP4.18□□□□□ -1.74
SF3B6-202ENST00000478050 FAM58AQ8N1B3 248 aa4.18□□□□□ -1.74
SF3B6-202ENST00000478050 GAPTQ8N292 157 aa4.18□□□□□ -1.74
SF3B6-202ENST00000478050 C15orf54Q8N8G6 183 aa4.18□□□□□ -1.74
SF3B6-202ENST00000478050 ZFP62Q8NB50 900 aaPredicted RBP4.18□□□□□ -1.74
SF3B6-202ENST00000478050 SUMF2Q8NBJ7 301 aa4.18□□□□□ -1.74
SF3B6-202ENST00000478050 TMEM178AQ8NBL3 297 aa4.18□□□□□ -1.74
SF3B6-202ENST00000478050 OR10Z1Q8NGY1 313 aa4.18□□□□□ -1.74
SF3B6-202ENST00000478050 OR8U1Q8NH10 309 aa4.18□□□□□ -1.74
SF3B6-202ENST00000478050 MRPL30Q8TCC3 161 aaKnown RBP4.18□□□□□ -1.74
SF3B6-202ENST00000478050 BCL2L2Q92843 193 aaPredicted RBP4.18□□□□□ -1.74
SF3B6-202ENST00000478050 BSCL2Q96G97 398 aaPredicted RBP4.18□□□□□ -1.74
SF3B6-202ENST00000478050 WDYHV1Q96HA8 205 aa4.18□□□□□ -1.74
SF3B6-202ENST00000478050 ADAT1Q9BUB4 502 aaKnown RBP4.18□□□□□ -1.74
SF3B6-202ENST00000478050 PBDC1Q9BVG4 233 aa4.18□□□□□ -1.74
SF3B6-202ENST00000478050 RTL8AQ9BWD3 113 aa4.18□□□□□ -1.74
SF3B6-202ENST00000478050 CCL28Q9NRJ3 127 aa4.18□□□□□ -1.74
SF3B6-202ENST00000478050 SMCO4Q9NRQ5 59 aa4.18□□□□□ -1.74
SF3B6-202ENST00000478050 LYRM2Q9NU23 88 aaPredicted RBP4.18□□□□□ -1.74
SF3B6-202ENST00000478050 PLA2G3Q9NZ20 509 aa4.18□□□□□ -1.74
SF3B6-202ENST00000478050 TREM2Q9NZC2 230 aa4.18□□□□□ -1.74
SF3B6-202ENST00000478050 MLXQ9UH92 298 aa4.18□□□□□ -1.74
SF3B6-202ENST00000478050 POLDIP2Q9Y2S7 368 aa4.18□□□□□ -1.74
SF3B6-202ENST00000478050 OR2W1Q9Y3N9 320 aa4.18□□□□□ -1.74
SF3B6-202ENST00000478050 TNFRSF18Q9Y5U5 241 aa4.18□□□□□ -1.74
SF3B6-202ENST00000478050 PTPRBP23467 1997 aa4.18□□□□□ -1.74
SF3B6-202ENST00000478050 CHD3Q12873 2000 aaKnown RBP4.17□□□□□ -1.74
SF3B6-202ENST00000478050 ANKHD1Q8IWZ3 2542 aaKnown RBP4.17□□□□□ -1.74
SF3B6-202ENST00000478050 TRGV5A0A0B4J1U4 118 aa4.17□□□□□ -1.74
SF3B6-202ENST00000478050 TRAV24A0A0B4J272 114 aa4.17□□□□□ -1.74
SF3B6-202ENST00000478050 IGKV1D-13A0A0B4J2D9 117 aa4.17□□□□□ -1.74
SF3B6-202ENST00000478050 IGKV1-6A0A0C4DH72 117 aa4.17□□□□□ -1.74
SF3B6-202ENST00000478050 A0A0G2JNJ9 132 aa4.17□□□□□ -1.74
SF3B6-202ENST00000478050 A0A1B0GU03 582 aa4.17□□□□□ -1.74
SF3B6-202ENST00000478050 A0A1W2PNU3 283 aaPredicted RBP4.17□□□□□ -1.74
SF3B6-202ENST00000478050 IGSF23A1L1A6 192 aa4.17□□□□□ -1.74
SF3B6-202ENST00000478050 FAM24AA6NFZ4 105 aa4.17□□□□□ -1.74
SF3B6-202ENST00000478050 TMEM210A6NLX4 147 aa4.17□□□□□ -1.74
SF3B6-202ENST00000478050 AGPAT2O15120 278 aa4.17□□□□□ -1.74
SF3B6-202ENST00000478050 ADAM20O43506 726 aa4.17□□□□□ -1.74
SF3B6-202ENST00000478050 SSSCA1O60232 199 aa4.17□□□□□ -1.74
SF3B6-202ENST00000478050 PGLYRP1O75594 196 aaPredicted RBP4.17□□□□□ -1.74
SF3B6-202ENST00000478050 DFFBO76075 338 aa4.17□□□□□ -1.74
SF3B6-202ENST00000478050 TNFSF15O95150 251 aa4.17□□□□□ -1.74
SF3B6-202ENST00000478050 IGKV1-13P0DP09 117 aa4.17□□□□□ -1.74
SF3B6-202ENST00000478050 FOLR2P14207 255 aa4.17□□□□□ -1.74
SF3B6-202ENST00000478050 SELEP16581 610 aa4.17□□□□□ -1.74
SF3B6-202ENST00000478050 F2RP25116 425 aa4.17□□□□□ -1.74
SF3B6-202ENST00000478050 LMO1P25800 156 aa4.17□□□□□ -1.74
SF3B6-202ENST00000478050 CD82P27701 267 aa4.17□□□□□ -1.74
SF3B6-202ENST00000478050 WNT5AP41221 380 aa4.17□□□□□ -1.74
SF3B6-202ENST00000478050 PPT1P50897 306 aa4.17□□□□□ -1.74
SF3B6-202ENST00000478050 SOX8P57073 446 aa4.17□□□□□ -1.74
SF3B6-202ENST00000478050 POLR2GP62487 172 aaKnown RBP eCLIP4.17□□□□□ -1.74
SF3B6-202ENST00000478050 RPL23AP62750 156 aaKnown RBP4.17□□□□□ -1.74
SF3B6-202ENST00000478050 NHLH2Q02577 135 aa4.17□□□□□ -1.74
SF3B6-202ENST00000478050 HERPUD1Q15011 391 aa4.17□□□□□ -1.74
SF3B6-202ENST00000478050 GABRA6Q16445 453 aa4.17□□□□□ -1.74
SF3B6-202ENST00000478050 C3AR1Q16581 482 aa4.17□□□□□ -1.74
SF3B6-202ENST00000478050 HIKESHIQ53FT3 197 aa4.17□□□□□ -1.74
SF3B6-202ENST00000478050 ZNF766Q5HY98 468 aa4.17□□□□□ -1.74
SF3B6-202ENST00000478050 KIAA2026Q5HYC2 2103 aa4.17□□□□□ -1.74
SF3B6-202ENST00000478050 ZNF324BQ6AW86 544 aaPredicted RBP4.17□□□□□ -1.74
SF3B6-202ENST00000478050 Q6P435 159 aa4.17□□□□□ -1.74
SF3B6-202ENST00000478050 FIP1L1Q6UN15 594 aaKnown RBP4.17□□□□□ -1.74
SF3B6-202ENST00000478050 CLEC9AQ6UXN8 241 aa4.17□□□□□ -1.74
SF3B6-202ENST00000478050 DPPA3Q6W0C5 159 aa4.17□□□□□ -1.74
SF3B6-202ENST00000478050 TMEM182Q6ZP80 229 aaPredicted RBP4.17□□□□□ -1.74
SF3B6-202ENST00000478050 P4HA3Q7Z4N8 544 aa4.17□□□□□ -1.74
SF3B6-202ENST00000478050 MDP1Q86V88 176 aa4.17□□□□□ -1.74
SF3B6-202ENST00000478050 BCL6BQ8N143 479 aaPredicted RBP4.17□□□□□ -1.74
SF3B6-202ENST00000478050 BATF2Q8N1L9 274 aa4.17□□□□□ -1.74
SF3B6-202ENST00000478050 TMEM252Q8N6L7 170 aa4.17□□□□□ -1.74
SF3B6-202ENST00000478050 HSD17B11Q8NBQ5 300 aa4.17□□□□□ -1.74
SF3B6-202ENST00000478050 OR10V1Q8NGI7 309 aa4.17□□□□□ -1.74
SF3B6-202ENST00000478050 OR10J5Q8NHC4 309 aa4.17□□□□□ -1.74
SF3B6-202ENST00000478050 LILRB1Q8NHL6 650 aaPredicted RBP4.17□□□□□ -1.74
SF3B6-202ENST00000478050 LSM10Q969L4 123 aaKnown RBP4.17□□□□□ -1.74
SF3B6-202ENST00000478050 GNPNAT1Q96EK6 184 aaPredicted RBP4.17□□□□□ -1.74
SF3B6-202ENST00000478050 ZNF503Q96F45 646 aa4.17□□□□□ -1.74
SF3B6-202ENST00000478050 GMPPAQ96IJ6 420 aaPredicted RBP4.17□□□□□ -1.74
SF3B6-202ENST00000478050 AKR1E2Q96JD6 320 aa4.17□□□□□ -1.74
SF3B6-202ENST00000478050 SCRT1Q9BWW7 348 aa4.17□□□□□ -1.74
SF3B6-202ENST00000478050 OR51I2Q9H344 312 aa4.17□□□□□ -1.74
SF3B6-202ENST00000478050 TUBA4BQ9H853 241 aa4.17□□□□□ -1.74
SF3B6-202ENST00000478050 CDH20Q9HBT6 801 aa4.17□□□□□ -1.74
SF3B6-202ENST00000478050 BIN3Q9NQY0 253 aa4.17□□□□□ -1.74
SF3B6-202ENST00000478050 GLRX2Q9NS18 164 aa4.17□□□□□ -1.74
SF3B6-202ENST00000478050 IL36RNQ9UBH0 155 aa4.17□□□□□ -1.74
SF3B6-202ENST00000478050 Q9UFV3 132 aa4.17□□□□□ -1.74
SF3B6-202ENST00000478050 KLF2Q9Y5W3 355 aaPredicted RBP4.17□□□□□ -1.74
SF3B6-202ENST00000478050 LIPGQ9Y5X9 500 aa4.17□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms