RNA–Protein interactions for RNA: ENST00000476183.2

LIME1-204, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 5

Gene LIME1, Length 809 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-204ENST00000476183 DNAH3Q8TD57 4116 aa16.69■□□□□ 0.26
LIME1-204ENST00000476183 NOTOA8MTQ0 251 aa16.69■□□□□ 0.26
LIME1-204ENST00000476183 MFNGO00587 321 aa16.69■□□□□ 0.26
LIME1-204ENST00000476183 CEACAM6P40199 344 aa16.69■□□□□ 0.26
LIME1-204ENST00000476183 RPL39P5Q59GN2 51 aa16.69■□□□□ 0.26
LIME1-204ENST00000476183 STPG2Q8N412 459 aa16.69■□□□□ 0.26
LIME1-204ENST00000476183 OR8H1Q8NGG4 311 aa16.69■□□□□ 0.26
LIME1-204ENST00000476183 CHPT1Q8WUD6 406 aa16.69■□□□□ 0.26
LIME1-204ENST00000476183 PTX4Q96A99 478 aa16.69■□□□□ 0.26
LIME1-204ENST00000476183 ABHD14BQ96IU4 210 aa16.69■□□□□ 0.26
LIME1-204ENST00000476183 HSPB9Q9BQS6 159 aa16.69■□□□□ 0.26
LIME1-204ENST00000476183 C11orf54Q9H0W9 315 aaPredicted RBP16.69■□□□□ 0.26
LIME1-204ENST00000476183 A0A075B6Q4 140 aa16.68■□□□□ 0.26
LIME1-204ENST00000476183 TRDCB7Z8K6 153 aa16.68■□□□□ 0.26
LIME1-204ENST00000476183 ITGB1BP1O14713 200 aa16.68■□□□□ 0.26
LIME1-204ENST00000476183 CD3GP09693 182 aa16.68■□□□□ 0.26
LIME1-204ENST00000476183 HIST1H1DP16402 221 aaKnown RBP16.68■□□□□ 0.26
LIME1-204ENST00000476183 ZBTB25P24278 435 aa16.68■□□□□ 0.26
LIME1-204ENST00000476183 GADD45AP24522 165 aa16.68■□□□□ 0.26
LIME1-204ENST00000476183 CNTFRP26992 372 aa16.68■□□□□ 0.26
LIME1-204ENST00000476183 TPRA1Q86W33 373 aa16.68■□□□□ 0.26
LIME1-204ENST00000476183 RASL11BQ9BPW5 248 aa16.68■□□□□ 0.26
LIME1-204ENST00000476183 CHCHD6Q9BRQ6 235 aa16.68■□□□□ 0.26
LIME1-204ENST00000476183 PIPOXQ9P0Z9 390 aa16.68■□□□□ 0.26
LIME1-204ENST00000476183 RAB29O14966 203 aa16.67■□□□□ 0.26
LIME1-204ENST00000476183 HSPA12AO43301 675 aa16.67■□□□□ 0.26
LIME1-204ENST00000476183 FCGR3AP08637 254 aa16.67■□□□□ 0.26
LIME1-204ENST00000476183 CLEC2LP0C7M8 214 aa16.67■□□□□ 0.26
LIME1-204ENST00000476183 CT45A6P0DMU7 189 aa16.67■□□□□ 0.26
LIME1-204ENST00000476183 CT45A5P0DMU8 189 aa16.67■□□□□ 0.26
LIME1-204ENST00000476183 CT45A7P0DMV0 189 aa16.67■□□□□ 0.26
LIME1-204ENST00000476183 SDC2P34741 201 aa16.67■□□□□ 0.26
LIME1-204ENST00000476183 ACTBP60709 375 aa16.67■□□□□ 0.26
LIME1-204ENST00000476183 KHDC1LQ5JSQ8 128 aa16.67■□□□□ 0.26
LIME1-204ENST00000476183 SAMD5Q5TGI4 173 aa16.67■□□□□ 0.26
LIME1-204ENST00000476183 FAM71F2Q6NXP2 309 aa16.67■□□□□ 0.26
LIME1-204ENST00000476183 FOXRED2Q8IWF2 684 aa16.67■□□□□ 0.26
LIME1-204ENST00000476183 ELF5Q9UKW6 265 aaPredicted RBP16.67■□□□□ 0.26
LIME1-204ENST00000476183 TGP01266 2768 aa16.67■□□□□ 0.26
LIME1-204ENST00000476183 METTL21EPA6NDL7 271 aa16.66■□□□□ 0.26
LIME1-204ENST00000476183 CD36P16671 472 aa16.66■□□□□ 0.26
LIME1-204ENST00000476183 MMDQ15546 238 aa16.66■□□□□ 0.26
LIME1-204ENST00000476183 PDLIM3Q53GG5 364 aaPredicted RBP16.66■□□□□ 0.26
LIME1-204ENST00000476183 SFXN4Q6P4A7 337 aa16.66■□□□□ 0.26
LIME1-204ENST00000476183 GLDNQ6ZMI3 551 aaPredicted RBP16.66■□□□□ 0.26
LIME1-204ENST00000476183 MAFIPQ8WZ33 124 aa16.66■□□□□ 0.26
LIME1-204ENST00000476183 KCTD7Q96MP8 289 aa16.66■□□□□ 0.26
LIME1-204ENST00000476183 ATG5Q9H1Y0 275 aa16.66■□□□□ 0.26
LIME1-204ENST00000476183 ZNF230Q9UIE0 474 aaPredicted RBP16.66■□□□□ 0.26
LIME1-204ENST00000476183 DAPK2Q9UIK4 370 aa16.66■□□□□ 0.26
LIME1-204ENST00000476183 RNF150Q9ULK6 438 aa16.66■□□□□ 0.26
LIME1-204ENST00000476183 LOC100506127A0A0U1RQW1 187 aa16.65■□□□□ 0.26
LIME1-204ENST00000476183 AP4M1O00189 453 aa16.65■□□□□ 0.26
LIME1-204ENST00000476183 FABP7O15540 132 aa16.65■□□□□ 0.26
LIME1-204ENST00000476183 PROP1O75360 226 aa16.65■□□□□ 0.26
LIME1-204ENST00000476183 GSTT2P0CG29 244 aa16.65■□□□□ 0.26
LIME1-204ENST00000476183 GSTT2BP0CG30 244 aa16.65■□□□□ 0.26
LIME1-204ENST00000476183 PF4V1P10720 104 aa16.65■□□□□ 0.26
LIME1-204ENST00000476183 SNRPBP14678 240 aaKnown RBP16.65■□□□□ 0.26
LIME1-204ENST00000476183 MRPS15P82914 257 aaKnown RBP16.65■□□□□ 0.26
LIME1-204ENST00000476183 BEAN1Q3B7T3 259 aa16.65■□□□□ 0.26
LIME1-204ENST00000476183 FAM131AQ6UXB0 335 aa16.65■□□□□ 0.26
LIME1-204ENST00000476183 C18orf65Q6ZTR6 163 aa16.65■□□□□ 0.26
LIME1-204ENST00000476183 OR4A4PQ8NGN8 299 aa16.65■□□□□ 0.26
LIME1-204ENST00000476183 EDARADDQ8WWZ3 215 aa16.65■□□□□ 0.26
LIME1-204ENST00000476183 CENPOQ9BU64 300 aa16.65■□□□□ 0.26
LIME1-204ENST00000476183 RDH8Q9NYR8 311 aa16.65■□□□□ 0.26
LIME1-204ENST00000476183 SOX6P35712 828 aa16.64■□□□□ 0.25
LIME1-204ENST00000476183 MXD1Q05195 221 aa16.64■□□□□ 0.25
LIME1-204ENST00000476183 IGSF11Q5DX21 431 aa16.64■□□□□ 0.25
LIME1-204ENST00000476183 CABLES2Q9BTV7 478 aa16.64■□□□□ 0.25
LIME1-204ENST00000476183 TOLLIPQ9H0E2 274 aa16.64■□□□□ 0.25
LIME1-204ENST00000476183 H0YJW9 148 aa16.63■□□□□ 0.25
LIME1-204ENST00000476183 RPL23AP62750 156 aaKnown RBP16.63■□□□□ 0.25
LIME1-204ENST00000476183 SLC35B1P78383 322 aa16.63■□□□□ 0.25
LIME1-204ENST00000476183 OXLD1Q5BKU9 147 aa16.63■□□□□ 0.25
LIME1-204ENST00000476183 WFDC9Q8NEX5 89 aa16.63■□□□□ 0.25
LIME1-204ENST00000476183 NPBQ8NG41 125 aa16.63■□□□□ 0.25
LIME1-204ENST00000476183 LGALS14Q8TCE9 139 aa16.63■□□□□ 0.25
LIME1-204ENST00000476183 PHF21AQ96BD5 680 aa16.63■□□□□ 0.25
LIME1-204ENST00000476183 GHITMQ9H3K2 345 aa16.63■□□□□ 0.25
LIME1-204ENST00000476183 ZNF107Q9UII5 783 aaPredicted RBP16.63■□□□□ 0.25
LIME1-204ENST00000476183 IGKV1D-8A0A087WSZ0 117 aa16.62■□□□□ 0.25
LIME1-204ENST00000476183 BET1O15155 118 aa16.62■□□□□ 0.25
LIME1-204ENST00000476183 NBR2O15453 112 aa16.62■□□□□ 0.25
LIME1-204ENST00000476183 LINC00205P59089 165 aa16.62■□□□□ 0.25
LIME1-204ENST00000476183 CFHR3Q02985 330 aa16.62■□□□□ 0.25
LIME1-204ENST00000476183 ARFRP1Q13795 201 aa16.62■□□□□ 0.25
LIME1-204ENST00000476183 KIR2DS1Q14954 304 aa16.62■□□□□ 0.25
LIME1-204ENST00000476183 CDNFQ49AH0 187 aa16.62■□□□□ 0.25
LIME1-204ENST00000476183 KPRPQ5T749 579 aaPredicted RBP16.62■□□□□ 0.25
LIME1-204ENST00000476183 DRAXINQ8NBI3 349 aaPredicted RBP16.62■□□□□ 0.25
LIME1-204ENST00000476183 OR5AN1Q8NGI8 311 aa16.62■□□□□ 0.25
LIME1-204ENST00000476183 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP16.62■□□□□ 0.25
LIME1-204ENST00000476183 TRBV6-7A0A0A0MS04 114 aa16.61■□□□□ 0.25
LIME1-204ENST00000476183 OR5H14A6NHG9 310 aa16.61■□□□□ 0.25
LIME1-204ENST00000476183 NDUFA3O95167 84 aa16.61■□□□□ 0.25
LIME1-204ENST00000476183 SERPINB10P48595 397 aa16.61■□□□□ 0.25
LIME1-204ENST00000476183 PNLIPRP3Q17RR3 467 aa16.61■□□□□ 0.25
LIME1-204ENST00000476183 C5orf64Q2M2E5 130 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms