RNA–Protein interactions for RNA: ENST00000475639.5

U2AF1-209, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 4,694 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-209ENST00000475639 FOXQ1Q9C009 403 aa10.08□□□□□ -0.8
U2AF1-209ENST00000475639 TCF20Q9UGU0 1960 aaKnown RBP10.08□□□□□ -0.8
U2AF1-209ENST00000475639 IER3P46695 156 aa10.08□□□□□ -0.8
U2AF1-209ENST00000475639 MFAP2P55001 183 aa10.08□□□□□ -0.8
U2AF1-209ENST00000475639 SRSF5Q13243 272 aaKnown RBP10.08□□□□□ -0.8
U2AF1-209ENST00000475639 ZNF793Q6ZN11 406 aa10.08□□□□□ -0.8
U2AF1-209ENST00000475639 BEND2Q8NDZ0 799 aa10.08□□□□□ -0.8
U2AF1-209ENST00000475639 NOXO1Q8NFA2 376 aa10.08□□□□□ -0.8
U2AF1-209ENST00000475639 ZPLD1Q8TCW7 415 aa10.08□□□□□ -0.8
U2AF1-209ENST00000475639 FGF14Q92915 247 aa10.08□□□□□ -0.8
U2AF1-209ENST00000475639 LRP12Q9Y561 859 aa10.08□□□□□ -0.8
U2AF1-209ENST00000475639 UPK3AO75631 287 aa10.07□□□□□ -0.8
U2AF1-209ENST00000475639 DHRS3O75911 302 aa10.07□□□□□ -0.8
U2AF1-209ENST00000475639 DSCR4P56555 118 aaPredicted RBP10.07□□□□□ -0.8
U2AF1-209ENST00000475639 CXorf67Q86X51 503 aaPredicted RBP10.07□□□□□ -0.8
U2AF1-209ENST00000475639 OPN3Q9H1Y3 402 aaPredicted RBP10.07□□□□□ -0.8
U2AF1-209ENST00000475639 SPTAN1Q13813 2472 aaKnown RBP10.07□□□□□ -0.8
U2AF1-209ENST00000475639 A0A0A6YYD5 115 aa10.07□□□□□ -0.8
U2AF1-209ENST00000475639 A8MWL6 223 aa10.07□□□□□ -0.8
U2AF1-209ENST00000475639 LYL1P12980 280 aa10.07□□□□□ -0.8
U2AF1-209ENST00000475639 CA6P23280 308 aa10.07□□□□□ -0.8
U2AF1-209ENST00000475639 UBE2V2Q15819 145 aa10.07□□□□□ -0.8
U2AF1-209ENST00000475639 OR1L6Q8NGR2 347 aa10.07□□□□□ -0.8
U2AF1-209ENST00000475639 DPH3Q96FX2 82 aa10.07□□□□□ -0.8
U2AF1-209ENST00000475639 RASL11BQ9BPW5 248 aa10.07□□□□□ -0.8
U2AF1-209ENST00000475639 VN1R1Q9GZP7 353 aa10.07□□□□□ -0.8
U2AF1-209ENST00000475639 IL18BPO95998 194 aa10.07□□□□□ -0.8
U2AF1-209ENST00000475639 RAB9AP51151 201 aa10.07□□□□□ -0.8
U2AF1-209ENST00000475639 ZNF658BQ4V348 819 aaPredicted RBP10.07□□□□□ -0.8
U2AF1-209ENST00000475639 OTPQ5XKR4 325 aa10.07□□□□□ -0.8
U2AF1-209ENST00000475639 DYNLRB2Q8TF09 96 aa10.07□□□□□ -0.8
U2AF1-209ENST00000475639 DDA1Q9BW61 102 aa10.07□□□□□ -0.8
U2AF1-209ENST00000475639 HS3ST3B1Q9Y662 390 aa10.07□□□□□ -0.8
U2AF1-209ENST00000475639 TRBV5-7A0A0A0MS05 114 aa10.07□□□□□ -0.8
U2AF1-209ENST00000475639 FRG2CA6NGY1 282 aa10.07□□□□□ -0.8
U2AF1-209ENST00000475639 J3KRW8 73 aa10.07□□□□□ -0.8
U2AF1-209ENST00000475639 F2RL2O00254 374 aa10.07□□□□□ -0.8
U2AF1-209ENST00000475639 TNFSF11O14788 317 aa10.07□□□□□ -0.8
U2AF1-209ENST00000475639 OR5AC1P0C628 307 aa10.07□□□□□ -0.8
U2AF1-209ENST00000475639 ROM1Q03395 351 aa10.07□□□□□ -0.8
U2AF1-209ENST00000475639 CLEC18BQ6UXF7 455 aa10.07□□□□□ -0.8
U2AF1-209ENST00000475639 TBC1D26Q86UD7 250 aa10.07□□□□□ -0.8
U2AF1-209ENST00000475639 C4orf45Q96LM5 186 aa10.07□□□□□ -0.8
U2AF1-209ENST00000475639 GNRHR2Q96P88 292 aa10.07□□□□□ -0.8
U2AF1-209ENST00000475639 SNHG12Q9BXW3 62 aa10.07□□□□□ -0.8
U2AF1-209ENST00000475639 AICDAQ9GZX7 198 aa10.07□□□□□ -0.8
U2AF1-209ENST00000475639 C6orf106Q9H6K1 298 aaPredicted RBP10.07□□□□□ -0.8
U2AF1-209ENST00000475639 CNTD2Q9H8S5 307 aa10.07□□□□□ -0.8
U2AF1-209ENST00000475639 PLXNA2O75051 1894 aa10.06□□□□□ -0.8
U2AF1-209ENST00000475639 MED19A0JLT2 244 aaPredicted RBP10.06□□□□□ -0.8
U2AF1-209ENST00000475639 RAMP1O60894 148 aa10.06□□□□□ -0.8
U2AF1-209ENST00000475639 MT-ND6P03923 174 aa10.06□□□□□ -0.8
U2AF1-209ENST00000475639 TNFAIP6P98066 277 aaPredicted RBP10.06□□□□□ -0.8
U2AF1-209ENST00000475639 PDCD1Q15116 288 aa10.06□□□□□ -0.8
U2AF1-209ENST00000475639 PRSS8Q16651 343 aa10.06□□□□□ -0.8
U2AF1-209ENST00000475639 RAB1BQ9H0U4 201 aa10.06□□□□□ -0.8
U2AF1-209ENST00000475639 KLHDC2Q9Y2U9 406 aa10.06□□□□□ -0.8
U2AF1-209ENST00000475639 ZNF815PA8K554 130 aa10.06□□□□□ -0.8
U2AF1-209ENST00000475639 RBFOX2O43251 390 aaKnown RBP eCLIP10.06□□□□□ -0.8
U2AF1-209ENST00000475639 PDE6DO43924 150 aa10.06□□□□□ -0.8
U2AF1-209ENST00000475639 MPDU1O75352 247 aa10.06□□□□□ -0.8
U2AF1-209ENST00000475639 APCSP02743 223 aa10.06□□□□□ -0.8
U2AF1-209ENST00000475639 RNPS1Q15287 305 aaKnown RBP10.06□□□□□ -0.8
U2AF1-209ENST00000475639 CA13Q8N1Q1 262 aa10.06□□□□□ -0.8
U2AF1-209ENST00000475639 SPPL3Q8TCT6 385 aa10.06□□□□□ -0.8
U2AF1-209ENST00000475639 LRRC29Q8WV35 223 aa10.06□□□□□ -0.8
U2AF1-209ENST00000475639 MRGPRX1Q96LB2 322 aa10.06□□□□□ -0.8
U2AF1-209ENST00000475639 GPR27Q9NS67 375 aa10.06□□□□□ -0.8
U2AF1-209ENST00000475639 LOXL2Q9Y4K0 774 aa10.06□□□□□ -0.8
U2AF1-209ENST00000475639 TRGC2P03986 189 aa10.06□□□□□ -0.8
U2AF1-209ENST00000475639 ZNF83P51522 516 aa10.06□□□□□ -0.8
U2AF1-209ENST00000475639 SLC25A1P53007 311 aa10.06□□□□□ -0.8
U2AF1-209ENST00000475639 ALKBH6Q3KRA9 238 aa10.06□□□□□ -0.8
U2AF1-209ENST00000475639 FAHD2BQ6P2I3 314 aaPredicted RBP10.06□□□□□ -0.8
U2AF1-209ENST00000475639 ZNF441Q8N8Z8 693 aa10.06□□□□□ -0.8
U2AF1-209ENST00000475639 CDX2Q99626 313 aaPredicted RBP10.06□□□□□ -0.8
U2AF1-209ENST00000475639 HIST1H2BLQ99880 126 aa10.06□□□□□ -0.8
U2AF1-209ENST00000475639 SPAG8Q99932 426 aaPredicted RBP10.06□□□□□ -0.8
U2AF1-209ENST00000475639 MRM2Q9UI43 246 aaKnown RBP10.06□□□□□ -0.8
U2AF1-209ENST00000475639 MMP17Q9ULZ9 603 aa10.06□□□□□ -0.8
U2AF1-209ENST00000475639 LINC01553A4QN01 128 aa10.06□□□□□ -0.8
U2AF1-209ENST00000475639 TNFSF15O95150 251 aa10.06□□□□□ -0.8
U2AF1-209ENST00000475639 NGFRP08138 427 aa10.06□□□□□ -0.8
U2AF1-209ENST00000475639 CFPP27918 469 aa10.06□□□□□ -0.8
U2AF1-209ENST00000475639 C17orf99Q6UX52 265 aa10.06□□□□□ -0.8
U2AF1-209ENST00000475639 OR4X1Q8NH49 305 aa10.06□□□□□ -0.8
U2AF1-209ENST00000475639 R3HDM4Q96D70 268 aa10.06□□□□□ -0.8
U2AF1-209ENST00000475639 TMSB15BA0A087X1C1 80 aa10.05□□□□□ -0.8
U2AF1-209ENST00000475639 TRAV38-1A0A0B4J264 116 aa10.05□□□□□ -0.8
U2AF1-209ENST00000475639 ALG1L2C9J202 215 aa10.05□□□□□ -0.8
U2AF1-209ENST00000475639 GZMBP10144 247 aa10.05□□□□□ -0.8
U2AF1-209ENST00000475639 GZMHP20718 246 aa10.05□□□□□ -0.8
U2AF1-209ENST00000475639 CLDN18P56856 261 aa10.05□□□□□ -0.8
U2AF1-209ENST00000475639 ERVFRD-1P60508 538 aa10.05□□□□□ -0.8
U2AF1-209ENST00000475639 DPTQ07507 201 aa10.05□□□□□ -0.8
U2AF1-209ENST00000475639 FADS6Q8N9I5 356 aa10.05□□□□□ -0.8
U2AF1-209ENST00000475639 MRPL30Q8TCC3 161 aaKnown RBP10.05□□□□□ -0.8
U2AF1-209ENST00000475639 PRR13Q9NZ81 148 aa10.05□□□□□ -0.8
U2AF1-209ENST00000475639 PTPRQQ9UMZ3 2332 aa10.05□□□□□ -0.8
U2AF1-209ENST00000475639 CTSDP07339 412 aaPredicted RBP10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms