RNA–Protein interactions for RNA: ENST00000475043.5

PDPN-204, Transcript of podoplanin, humanhuman

TSL 3 BASIC

Gene PDPN, Length 849 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-204ENST00000475043 HLA-DRB3P79483 266 aa7.42□□□□□ -1.22
PDPN-204ENST00000475043 MRPS15P82914 257 aaKnown RBP7.42□□□□□ -1.22
PDPN-204ENST00000475043 SSX1Q16384 188 aa7.42□□□□□ -1.22
PDPN-204ENST00000475043 PNLIPRP3Q17RR3 467 aa7.42□□□□□ -1.22
PDPN-204ENST00000475043 LY6G6FQ5SQ64 297 aa7.42□□□□□ -1.22
PDPN-204ENST00000475043 FOXB2Q5VYV0 432 aa7.42□□□□□ -1.22
PDPN-204ENST00000475043 ZNF880Q6PDB4 577 aa7.42□□□□□ -1.22
PDPN-204ENST00000475043 ZNF833PQ6ZTB9 187 aa7.42□□□□□ -1.22
PDPN-204ENST00000475043 C18orf65Q6ZTR6 163 aa7.42□□□□□ -1.22
PDPN-204ENST00000475043 REC114Q7Z4M0 266 aa7.42□□□□□ -1.22
PDPN-204ENST00000475043 FAM89BQ8N5H3 189 aa7.42□□□□□ -1.22
PDPN-204ENST00000475043 FAM71E2Q8N5Q1 922 aa7.42□□□□□ -1.22
PDPN-204ENST00000475043 COMMD1Q8N668 190 aa7.42□□□□□ -1.22
PDPN-204ENST00000475043 WFDC9Q8NEX5 89 aa7.42□□□□□ -1.22
PDPN-204ENST00000475043 ARHGAP5-AS1Q96IT6 56 aa7.42□□□□□ -1.22
PDPN-204ENST00000475043 NABP2Q9BQ15 211 aa7.42□□□□□ -1.22
PDPN-204ENST00000475043 CMSS1Q9BQ75 279 aaKnown RBP7.42□□□□□ -1.22
PDPN-204ENST00000475043 HSPB9Q9BQS6 159 aa7.42□□□□□ -1.22
PDPN-204ENST00000475043 ZNF251Q9BRH9 671 aa7.42□□□□□ -1.22
PDPN-204ENST00000475043 PECRQ9BY49 303 aa7.42□□□□□ -1.22
PDPN-204ENST00000475043 IFI27L2Q9H2X8 130 aa7.42□□□□□ -1.22
PDPN-204ENST00000475043 Q9H521 79 aa7.42□□□□□ -1.22
PDPN-204ENST00000475043 C12orf4Q9NQ89 552 aa7.42□□□□□ -1.22
PDPN-204ENST00000475043 ZFP57Q9NU63 452 aa7.42□□□□□ -1.22
PDPN-204ENST00000475043 NECAP2Q9NVZ3 263 aa7.42□□□□□ -1.22
PDPN-204ENST00000475043 NDUFB11Q9NX14 153 aa7.42□□□□□ -1.22
PDPN-204ENST00000475043 PIPOXQ9P0Z9 390 aa7.42□□□□□ -1.22
PDPN-204ENST00000475043 ZNF107Q9UII5 783 aaPredicted RBP7.42□□□□□ -1.22
PDPN-204ENST00000475043 MGAT4AQ9UM21 535 aa7.42□□□□□ -1.22
PDPN-204ENST00000475043 TRBV6-6A0A0A6YYG2 114 aa7.41□□□□□ -1.22
PDPN-204ENST00000475043 TMEM272A0A1B0GTI8 110 aa7.41□□□□□ -1.22
PDPN-204ENST00000475043 F8W735 103 aaPredicted RBP7.41□□□□□ -1.22
PDPN-204ENST00000475043 RAB29O14966 203 aa7.41□□□□□ -1.22
PDPN-204ENST00000475043 NBR2O15453 112 aa7.41□□□□□ -1.22
PDPN-204ENST00000475043 RPLP1P05386 114 aaKnown RBP7.41□□□□□ -1.22
PDPN-204ENST00000475043 SCTP09683 121 aa7.41□□□□□ -1.22
PDPN-204ENST00000475043 CNTFRP26992 372 aa7.41□□□□□ -1.22
PDPN-204ENST00000475043 CEACAM6P40199 344 aa7.41□□□□□ -1.22
PDPN-204ENST00000475043 TMEM50BP56557 158 aa7.41□□□□□ -1.22
PDPN-204ENST00000475043 OR10A3P58181 314 aa7.41□□□□□ -1.22
PDPN-204ENST00000475043 GABARAPL2P60520 117 aa7.41□□□□□ -1.22
PDPN-204ENST00000475043 PLA2G7Q13093 441 aa7.41□□□□□ -1.22
PDPN-204ENST00000475043 RPL39P5Q59GN2 51 aa7.41□□□□□ -1.22
PDPN-204ENST00000475043 CXorf66Q5JRM2 361 aaPredicted RBP7.41□□□□□ -1.22
PDPN-204ENST00000475043 PLAC9Q5JTB6 97 aa7.41□□□□□ -1.22
PDPN-204ENST00000475043 FAM131AQ6UXB0 335 aa7.41□□□□□ -1.22
PDPN-204ENST00000475043 LCNL1Q6ZST4 164 aa7.41□□□□□ -1.22
PDPN-204ENST00000475043 ZNF695Q8IW36 515 aa7.41□□□□□ -1.22
PDPN-204ENST00000475043 MRAPQ8TCY5 172 aa7.41□□□□□ -1.22
PDPN-204ENST00000475043 RCC1LQ96I51 464 aaKnown RBP7.41□□□□□ -1.22
PDPN-204ENST00000475043 ABHD14BQ96IU4 210 aa7.41□□□□□ -1.22
PDPN-204ENST00000475043 RITA1Q96K30 269 aa7.41□□□□□ -1.22
PDPN-204ENST00000475043 PARP12Q9H0J9 701 aaKnown RBP7.41□□□□□ -1.22
PDPN-204ENST00000475043 Q9N2K0 584 aa7.41□□□□□ -1.22
PDPN-204ENST00000475043 OR1A1Q9P1Q5 309 aa7.41□□□□□ -1.22
PDPN-204ENST00000475043 KIAA1456Q9P272 454 aa7.41□□□□□ -1.22
PDPN-204ENST00000475043 RAB22AQ9UL26 194 aa7.41□□□□□ -1.22
PDPN-204ENST00000475043 CMYA5Q8N3K9 4069 aa7.41□□□□□ -1.22
PDPN-204ENST00000475043 NOTCH1P46531 2555 aa7.4□□□□□ -1.22
PDPN-204ENST00000475043 A0A075B6Q4 140 aa7.4□□□□□ -1.22
PDPN-204ENST00000475043 TRAV1-2A0A0B4J238 106 aa7.4□□□□□ -1.22
PDPN-204ENST00000475043 TRDV1A0A1B0GX56 115 aa7.4□□□□□ -1.22
PDPN-204ENST00000475043 SHISA3A0PJX4 238 aa7.4□□□□□ -1.22
PDPN-204ENST00000475043 SMIM30A4D0T7 59 aa7.4□□□□□ -1.22
PDPN-204ENST00000475043 IFITM5A6NNB3 132 aa7.4□□□□□ -1.22
PDPN-204ENST00000475043 FOXI3A8MTJ6 420 aaPredicted RBP7.4□□□□□ -1.22
PDPN-204ENST00000475043 H7C2Y5 167 aa7.4□□□□□ -1.22
PDPN-204ENST00000475043 DUS4LO95620 317 aaKnown RBP7.4□□□□□ -1.22
PDPN-204ENST00000475043 GSTP1P09211 210 aaKnown RBP7.4□□□□□ -1.22
PDPN-204ENST00000475043 CD3GP09693 182 aa7.4□□□□□ -1.22
PDPN-204ENST00000475043 RAB3BP20337 219 aa7.4□□□□□ -1.22
PDPN-204ENST00000475043 GADD45AP24522 165 aa7.4□□□□□ -1.22
PDPN-204ENST00000475043 PSMB9P28065 219 aa7.4□□□□□ -1.22
PDPN-204ENST00000475043 SLC6A1P30531 599 aa7.4□□□□□ -1.22
PDPN-204ENST00000475043 THBS3P49746 956 aa7.4□□□□□ -1.22
PDPN-204ENST00000475043 RAB25P57735 213 aa7.4□□□□□ -1.22
PDPN-204ENST00000475043 C22orf42Q6IC83 251 aa7.4□□□□□ -1.22
PDPN-204ENST00000475043 FAM71F2Q6NXP2 309 aa7.4□□□□□ -1.22
PDPN-204ENST00000475043 CD200R1LQ6Q8B3 271 aa7.4□□□□□ -1.22
PDPN-204ENST00000475043 GLDNQ6ZMI3 551 aaPredicted RBP7.4□□□□□ -1.22
PDPN-204ENST00000475043 ETV3LQ6ZN32 361 aa7.4□□□□□ -1.22
PDPN-204ENST00000475043 MRPL41Q8IXM3 137 aaKnown RBP7.4□□□□□ -1.22
PDPN-204ENST00000475043 SPARTQ8N0X7 666 aa7.4□□□□□ -1.22
PDPN-204ENST00000475043 LINC00482Q8N8I6 264 aa7.4□□□□□ -1.22
PDPN-204ENST00000475043 RAB3CQ96E17 227 aa7.4□□□□□ -1.22
PDPN-204ENST00000475043 DUX3Q96PT4 197 aa7.4□□□□□ -1.22
PDPN-204ENST00000475043 KRTAP9-2Q9BYQ4 174 aa7.4□□□□□ -1.22
PDPN-204ENST00000475043 PARP11Q9NR21 331 aa7.4□□□□□ -1.22
PDPN-204ENST00000475043 AURKAIP1Q9NWT8 199 aaPredicted RBP7.4□□□□□ -1.22
PDPN-204ENST00000475043 RNF150Q9ULK6 438 aa7.4□□□□□ -1.22
PDPN-204ENST00000475043 A0A0B4J203 849 aa7.39□□□□□ -1.23
PDPN-204ENST00000475043 OR5H14A6NHG9 310 aa7.39□□□□□ -1.23
PDPN-204ENST00000475043 TRDCB7Z8K6 153 aa7.39□□□□□ -1.23
PDPN-204ENST00000475043 LDLRAD4O15165 306 aa7.39□□□□□ -1.23
PDPN-204ENST00000475043 MRPS14O60783 128 aaKnown RBP7.39□□□□□ -1.23
PDPN-204ENST00000475043 IGF1P05019 195 aa7.39□□□□□ -1.23
PDPN-204ENST00000475043 CT45A6P0DMU7 189 aa7.39□□□□□ -1.23
PDPN-204ENST00000475043 CT45A5P0DMU8 189 aa7.39□□□□□ -1.23
PDPN-204ENST00000475043 CT45A7P0DMV0 189 aa7.39□□□□□ -1.23
PDPN-204ENST00000475043 OR5H8P0DN80 308 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms