RNA–Protein interactions for RNA: ENST00000474254.5

CPA4-205, Transcript of carboxypeptidase A4, humanhuman

TSL 1 (best)

Gene CPA4, Length 1,026 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPA4-205ENST00000474254 COMMD1Q8N668 190 aa12.81□□□□□ -0.36
CPA4-205ENST00000474254 RBMXL1Q96E39 390 aaKnown RBP12.81□□□□□ -0.36
CPA4-205ENST00000474254 NABP2Q9BQ15 211 aa12.81□□□□□ -0.36
CPA4-205ENST00000474254 PECRQ9BY49 303 aa12.81□□□□□ -0.36
CPA4-205ENST00000474254 IFITM5A6NNB3 132 aa12.8□□□□□ -0.36
CPA4-205ENST00000474254 ITGB1BP1O14713 200 aa12.8□□□□□ -0.36
CPA4-205ENST00000474254 ST8SIA5O15466 376 aa12.8□□□□□ -0.36
CPA4-205ENST00000474254 KRTAP10-11P60412 298 aa12.8□□□□□ -0.36
CPA4-205ENST00000474254 DCTN2Q13561 401 aaKnown RBP12.8□□□□□ -0.36
CPA4-205ENST00000474254 PLAC9Q5JTB6 97 aa12.8□□□□□ -0.36
CPA4-205ENST00000474254 SPARTQ8N0X7 666 aa12.8□□□□□ -0.36
CPA4-205ENST00000474254 FCGR1BQ92637 280 aa12.8□□□□□ -0.36
CPA4-205ENST00000474254 RASL11BQ9BPW5 248 aa12.8□□□□□ -0.36
CPA4-205ENST00000474254 HSPB9Q9BQS6 159 aa12.8□□□□□ -0.36
CPA4-205ENST00000474254 PARP12Q9H0J9 701 aaKnown RBP12.8□□□□□ -0.36
CPA4-205ENST00000474254 Q9N2K0 584 aa12.8□□□□□ -0.36
CPA4-205ENST00000474254 SLC23A1Q9UHI7 598 aa12.8□□□□□ -0.36
CPA4-205ENST00000474254 RAB22AQ9UL26 194 aa12.8□□□□□ -0.36
CPA4-205ENST00000474254 RAB3BP20337 219 aa12.79□□□□□ -0.36
CPA4-205ENST00000474254 SOX6P35712 828 aa12.79□□□□□ -0.36
CPA4-205ENST00000474254 MMDQ15546 238 aa12.79□□□□□ -0.36
CPA4-205ENST00000474254 C22orf42Q6IC83 251 aa12.79□□□□□ -0.36
CPA4-205ENST00000474254 ETV3LQ6ZN32 361 aa12.79□□□□□ -0.36
CPA4-205ENST00000474254 LINC00482Q8N8I6 264 aa12.79□□□□□ -0.36
CPA4-205ENST00000474254 CMSS1Q9BQ75 279 aaKnown RBP12.79□□□□□ -0.36
CPA4-205ENST00000474254 ZNF251Q9BRH9 671 aa12.79□□□□□ -0.36
CPA4-205ENST00000474254 MCRIP2Q9BUT9 160 aaKnown RBP12.79□□□□□ -0.36
CPA4-205ENST00000474254 YTHDF1Q9BYJ9 559 aaKnown RBP12.79□□□□□ -0.36
CPA4-205ENST00000474254 PIPOXQ9P0Z9 390 aa12.79□□□□□ -0.36
CPA4-205ENST00000474254 ZNF580Q9UK33 172 aa12.79□□□□□ -0.36
CPA4-205ENST00000474254 RYR3Q15413 4870 aa12.78□□□□□ -0.36
CPA4-205ENST00000474254 NUDT19A8MXV4 375 aa12.78□□□□□ -0.36
CPA4-205ENST00000474254 RAB29O14966 203 aa12.78□□□□□ -0.36
CPA4-205ENST00000474254 RRP9O43818 475 aaKnown RBP12.78□□□□□ -0.36
CPA4-205ENST00000474254 SLC2A2P11168 524 aaPredicted RBP12.78□□□□□ -0.36
CPA4-205ENST00000474254 PSMB9P28065 219 aa12.78□□□□□ -0.36
CPA4-205ENST00000474254 SLC6A1P30531 599 aa12.78□□□□□ -0.36
CPA4-205ENST00000474254 ACTBP60709 375 aa12.78□□□□□ -0.36
CPA4-205ENST00000474254 EGFEM1PQ0D2K5 195 aa12.78□□□□□ -0.36
CPA4-205ENST00000474254 TEX38Q6PEX7 206 aa12.78□□□□□ -0.36
CPA4-205ENST00000474254 NR2C2APQ86WQ0 139 aa12.78□□□□□ -0.36
CPA4-205ENST00000474254 MRPL41Q8IXM3 137 aaKnown RBP12.78□□□□□ -0.36
CPA4-205ENST00000474254 EDARADDQ8WWZ3 215 aa12.78□□□□□ -0.36
CPA4-205ENST00000474254 AGMATQ9BSE5 352 aa12.78□□□□□ -0.36
CPA4-205ENST00000474254 GON7Q9BXV9 100 aa12.78□□□□□ -0.36
CPA4-205ENST00000474254 ZFP57Q9NU63 452 aa12.78□□□□□ -0.36
CPA4-205ENST00000474254 OR1A1Q9P1Q5 309 aa12.78□□□□□ -0.36
CPA4-205ENST00000474254 KCNK7Q9Y2U2 307 aa12.78□□□□□ -0.36
CPA4-205ENST00000474254 HSPA12AO43301 675 aa12.77□□□□□ -0.37
CPA4-205ENST00000474254 IGF1P05019 195 aa12.77□□□□□ -0.37
CPA4-205ENST00000474254 SCTP09683 121 aa12.77□□□□□ -0.37
CPA4-205ENST00000474254 RAB6AP20340 208 aa12.77□□□□□ -0.37
CPA4-205ENST00000474254 ZBTB25P24278 435 aa12.77□□□□□ -0.37
CPA4-205ENST00000474254 FGF9P31371 208 aaPredicted RBP12.77□□□□□ -0.37
CPA4-205ENST00000474254 CFHR3Q02985 330 aa12.77□□□□□ -0.37
CPA4-205ENST00000474254 MOGAT2Q3SYC2 334 aa12.77□□□□□ -0.37
CPA4-205ENST00000474254 RPL39P5Q59GN2 51 aa12.77□□□□□ -0.37
CPA4-205ENST00000474254 FAM131AQ6UXB0 335 aa12.77□□□□□ -0.37
CPA4-205ENST00000474254 KLHL30-AS1Q8NEE0 82 aa12.77□□□□□ -0.37
CPA4-205ENST00000474254 RAB3CQ96E17 227 aa12.77□□□□□ -0.37
CPA4-205ENST00000474254 GHITMQ9H3K2 345 aa12.77□□□□□ -0.37
CPA4-205ENST00000474254 ZMAT5Q9UDW3 170 aaKnown RBP12.77□□□□□ -0.37
CPA4-205ENST00000474254 ZNF107Q9UII5 783 aaPredicted RBP12.77□□□□□ -0.37
CPA4-205ENST00000474254 A0A0B4J203 849 aa12.76□□□□□ -0.37
CPA4-205ENST00000474254 IGKV1-6A0A0C4DH72 117 aa12.76□□□□□ -0.37
CPA4-205ENST00000474254 OR5H14A6NHG9 310 aa12.76□□□□□ -0.37
CPA4-205ENST00000474254 RAB27BO00194 218 aa12.76□□□□□ -0.37
CPA4-205ENST00000474254 MFNGO00587 321 aa12.76□□□□□ -0.37
CPA4-205ENST00000474254 NBR2O15453 112 aa12.76□□□□□ -0.37
CPA4-205ENST00000474254 NDUFA3O95167 84 aa12.76□□□□□ -0.37
CPA4-205ENST00000474254 HLA-DRB1P01911 266 aa12.76□□□□□ -0.37
CPA4-205ENST00000474254 CNTFRP26992 372 aa12.76□□□□□ -0.37
CPA4-205ENST00000474254 FOXE3Q13461 319 aa12.76□□□□□ -0.37
CPA4-205ENST00000474254 PNLIPRP3Q17RR3 467 aa12.76□□□□□ -0.37
CPA4-205ENST00000474254 ZNF773Q6PK81 442 aa12.76□□□□□ -0.37
CPA4-205ENST00000474254 C18orf65Q6ZTR6 163 aa12.76□□□□□ -0.37
CPA4-205ENST00000474254 C8orf86Q6ZUL3 223 aa12.76□□□□□ -0.37
CPA4-205ENST00000474254 RNF152Q8N8N0 203 aa12.76□□□□□ -0.37
CPA4-205ENST00000474254 OR10R2Q8NGX6 335 aa12.76□□□□□ -0.37
CPA4-205ENST00000474254 PTX4Q96A99 478 aa12.76□□□□□ -0.37
CPA4-205ENST00000474254 ABHD14BQ96IU4 210 aa12.76□□□□□ -0.37
CPA4-205ENST00000474254 RITA1Q96K30 269 aa12.76□□□□□ -0.37
CPA4-205ENST00000474254 WWC2-AS2Q96NR7 200 aa12.76□□□□□ -0.37
CPA4-205ENST00000474254 B9D2Q9BPU9 175 aa12.76□□□□□ -0.37
CPA4-205ENST00000474254 C11orf54Q9H0W9 315 aaPredicted RBP12.76□□□□□ -0.37
CPA4-205ENST00000474254 TXNL4BQ9NX01 149 aaKnown RBP12.76□□□□□ -0.37
CPA4-205ENST00000474254 STUB1Q9UNE7 303 aa12.76□□□□□ -0.37
CPA4-205ENST00000474254 TRDCB7Z8K6 153 aa12.75□□□□□ -0.37
CPA4-205ENST00000474254 IGHG4P01861 327 aa12.75□□□□□ -0.37
CPA4-205ENST00000474254 ELANEP08246 267 aa12.75□□□□□ -0.37
CPA4-205ENST00000474254 FCGR3AP08637 254 aa12.75□□□□□ -0.37
CPA4-205ENST00000474254 CD3GP09693 182 aa12.75□□□□□ -0.37
CPA4-205ENST00000474254 CT45A6P0DMU7 189 aa12.75□□□□□ -0.37
CPA4-205ENST00000474254 CT45A5P0DMU8 189 aa12.75□□□□□ -0.37
CPA4-205ENST00000474254 CT45A7P0DMV0 189 aa12.75□□□□□ -0.37
CPA4-205ENST00000474254 HIST1H1DP16402 221 aaKnown RBP12.75□□□□□ -0.37
CPA4-205ENST00000474254 VDAC1P21796 283 aa12.75□□□□□ -0.37
CPA4-205ENST00000474254 GADD45AP24522 165 aa12.75□□□□□ -0.37
CPA4-205ENST00000474254 CEACAM6P40199 344 aa12.75□□□□□ -0.37
CPA4-205ENST00000474254 THBS3P49746 956 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms