RNA–Protein interactions for RNA: ENST00000471978.5

C9orf3-213, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-213ENST00000471978 FAM71F2Q6NXP2 309 aa17.57■□□□□ 0.4
C9orf3-213ENST00000471978 MOB1BQ7L9L4 216 aa17.57■□□□□ 0.4
C9orf3-213ENST00000471978 UBE2E2Q96LR5 201 aa17.57■□□□□ 0.4
C9orf3-213ENST00000471978 LPAR5Q9H1C0 372 aa17.57■□□□□ 0.4
C9orf3-213ENST00000471978 NKX1-2Q9UD57 310 aaPredicted RBP17.57■□□□□ 0.4
C9orf3-213ENST00000471978 SLC23A1Q9UHI7 598 aa17.57■□□□□ 0.4
C9orf3-213ENST00000471978 TRAV41A0A0B4J266 112 aa17.56■□□□□ 0.4
C9orf3-213ENST00000471978 RAB29O14966 203 aa17.56■□□□□ 0.4
C9orf3-213ENST00000471978 IGLV1-40P01703 118 aa17.56■□□□□ 0.4
C9orf3-213ENST00000471978 HSMCR30P0CW71 290 aa17.56■□□□□ 0.4
C9orf3-213ENST00000471978 KIAA0141Q14154 515 aaPredicted RBP17.56■□□□□ 0.4
C9orf3-213ENST00000471978 P2RY14Q15391 338 aa17.56■□□□□ 0.4
C9orf3-213ENST00000471978 RPL39P5Q59GN2 51 aa17.56■□□□□ 0.4
C9orf3-213ENST00000471978 FAM131AQ6UXB0 335 aa17.56■□□□□ 0.4
C9orf3-213ENST00000471978 ZNF491Q8N8L2 437 aa17.56■□□□□ 0.4
C9orf3-213ENST00000471978 URM1Q9BTM9 101 aaKnown RBP17.56■□□□□ 0.4
C9orf3-213ENST00000471978 RIMS4Q9H426 269 aaPredicted RBP17.56■□□□□ 0.4
C9orf3-213ENST00000471978 GNB4Q9HAV0 340 aa17.56■□□□□ 0.4
C9orf3-213ENST00000471978 PLGRKTQ9HBL7 147 aa17.56■□□□□ 0.4
C9orf3-213ENST00000471978 AK3Q9UIJ7 227 aa17.56■□□□□ 0.4
C9orf3-213ENST00000471978 VSIG4Q9Y279 399 aa17.56■□□□□ 0.4
C9orf3-213ENST00000471978 TPRKBQ9Y3C4 175 aa17.56■□□□□ 0.4
C9orf3-213ENST00000471978 SOCS1O15524 211 aa17.55■□□□□ 0.4
C9orf3-213ENST00000471978 NDUFA3O95167 84 aa17.55■□□□□ 0.4
C9orf3-213ENST00000471978 CT45A6P0DMU7 189 aa17.55■□□□□ 0.4
C9orf3-213ENST00000471978 CT45A5P0DMU8 189 aa17.55■□□□□ 0.4
C9orf3-213ENST00000471978 CT45A7P0DMV0 189 aa17.55■□□□□ 0.4
C9orf3-213ENST00000471978 ARSBP15848 533 aa17.55■□□□□ 0.4
C9orf3-213ENST00000471978 AQP4P55087 323 aa17.55■□□□□ 0.4
C9orf3-213ENST00000471978 TMEM91Q6ZNR0 172 aa17.55■□□□□ 0.4
C9orf3-213ENST00000471978 GFI1Q99684 422 aa17.55■□□□□ 0.4
C9orf3-213ENST00000471978 PARP12Q9H0J9 701 aaKnown RBP17.55■□□□□ 0.4
C9orf3-213ENST00000471978 SCOCQ9UIL1 159 aa17.55■□□□□ 0.4
C9orf3-213ENST00000471978 TRBV6-6A0A0A6YYG2 114 aa17.54■□□□□ 0.4
C9orf3-213ENST00000471978 SLC17A2O00624 439 aa17.54■□□□□ 0.4
C9orf3-213ENST00000471978 ECI1P42126 302 aa17.54■□□□□ 0.4
C9orf3-213ENST00000471978 RPS25P62851 125 aaKnown RBP17.54■□□□□ 0.4
C9orf3-213ENST00000471978 TPBGQ13641 420 aa17.54■□□□□ 0.4
C9orf3-213ENST00000471978 GLDNQ6ZMI3 551 aaPredicted RBP17.54■□□□□ 0.4
C9orf3-213ENST00000471978 FAM89BQ8N5H3 189 aa17.54■□□□□ 0.4
C9orf3-213ENST00000471978 OR1N2Q8NGR9 330 aa17.54■□□□□ 0.4
C9orf3-213ENST00000471978 ABHD14BQ96IU4 210 aa17.54■□□□□ 0.4
C9orf3-213ENST00000471978 OR5B12Q96R08 314 aa17.54■□□□□ 0.4
C9orf3-213ENST00000471978 PRR25Q96S07 402 aa17.54■□□□□ 0.4
C9orf3-213ENST00000471978 HDHD3Q9BSH5 251 aaPredicted RBP17.54■□□□□ 0.4
C9orf3-213ENST00000471978 DUSP21Q9H596 190 aa17.54■□□□□ 0.4
C9orf3-213ENST00000471978 AK6Q9Y3D8 172 aaKnown RBP17.54■□□□□ 0.4
C9orf3-213ENST00000471978 KMT2CQ8NEZ4 4911 aaKnown RBP17.54■□□□□ 0.4
C9orf3-213ENST00000471978 OR5H14A6NHG9 310 aa17.53■□□□□ 0.4
C9orf3-213ENST00000471978 I3L521 148 aa17.53■□□□□ 0.4
C9orf3-213ENST00000471978 OR8U8P0C7N1 319 aa17.53■□□□□ 0.4
C9orf3-213ENST00000471978 CEACAM6P40199 344 aa17.53■□□□□ 0.4
C9orf3-213ENST00000471978 RAB9AP51151 201 aa17.53■□□□□ 0.4
C9orf3-213ENST00000471978 RUNX1Q01196 453 aa17.53■□□□□ 0.4
C9orf3-213ENST00000471978 TRAM1Q15629 374 aa17.53■□□□□ 0.4
C9orf3-213ENST00000471978 ZNF260Q3ZCT1 412 aa17.53■□□□□ 0.4
C9orf3-213ENST00000471978 MINDY2Q8NBR6 621 aa17.53■□□□□ 0.4
C9orf3-213ENST00000471978 NRG4Q8WWG1 115 aa17.53■□□□□ 0.4
C9orf3-213ENST00000471978 GHITMQ9H3K2 345 aa17.53■□□□□ 0.4
C9orf3-213ENST00000471978 OR1A1Q9P1Q5 309 aa17.53■□□□□ 0.4
C9orf3-213ENST00000471978 H7C2Y5 167 aa17.52■□□□□ 0.4
C9orf3-213ENST00000471978 ITGB1BP1O14713 200 aa17.52■□□□□ 0.4
C9orf3-213ENST00000471978 RRHO14718 337 aa17.52■□□□□ 0.4
C9orf3-213ENST00000471978 HSPA12AO43301 675 aa17.52■□□□□ 0.4
C9orf3-213ENST00000471978 RGS10O43665 173 aa17.52■□□□□ 0.4
C9orf3-213ENST00000471978 ARL6IP5O75915 188 aa17.52■□□□□ 0.4
C9orf3-213ENST00000471978 ZBTB25P24278 435 aa17.52■□□□□ 0.4
C9orf3-213ENST00000471978 MC5RP33032 325 aa17.52■□□□□ 0.4
C9orf3-213ENST00000471978 GNB1P62873 340 aa17.52■□□□□ 0.4
C9orf3-213ENST00000471978 HLA-DRB3P79483 266 aa17.52■□□□□ 0.4
C9orf3-213ENST00000471978 NDPQ00604 133 aa17.52■□□□□ 0.4
C9orf3-213ENST00000471978 ZNF616Q08AN1 781 aa17.52■□□□□ 0.4
C9orf3-213ENST00000471978 PLGLAQ15195 96 aa17.52■□□□□ 0.4
C9orf3-213ENST00000471978 RAB11BQ15907 218 aa17.52■□□□□ 0.4
C9orf3-213ENST00000471978 ECSCRQ19T08 205 aa17.52■□□□□ 0.4
C9orf3-213ENST00000471978 ZNF660Q6AZW8 331 aaPredicted RBP17.52■□□□□ 0.4
C9orf3-213ENST00000471978 EDARADDQ8WWZ3 215 aa17.52■□□□□ 0.4
C9orf3-213ENST00000471978 AGMATQ9BSE5 352 aa17.52■□□□□ 0.4
C9orf3-213ENST00000471978 C11orf54Q9H0W9 315 aaPredicted RBP17.52■□□□□ 0.4
C9orf3-213ENST00000471978 FBXL15Q9H469 300 aa17.52■□□□□ 0.4
C9orf3-213ENST00000471978 ISYNA1Q9NPH2 558 aa17.52■□□□□ 0.4
C9orf3-213ENST00000471978 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP17.52■□□□□ 0.4
C9orf3-213ENST00000471978 HSF4Q9ULV5 492 aa17.52■□□□□ 0.4
C9orf3-213ENST00000471978 MGAT4AQ9UM21 535 aa17.52■□□□□ 0.4
C9orf3-213ENST00000471978 FBXO7Q9Y3I1 522 aa17.52■□□□□ 0.4
C9orf3-213ENST00000471978 FOXI3A8MTJ6 420 aaPredicted RBP17.51■□□□□ 0.39
C9orf3-213ENST00000471978 H0YJW9 148 aa17.51■□□□□ 0.39
C9orf3-213ENST00000471978 GSTP1P09211 210 aaKnown RBP17.51■□□□□ 0.39
C9orf3-213ENST00000471978 PSMA1P25786 263 aaKnown RBP17.51■□□□□ 0.39
C9orf3-213ENST00000471978 VEGFCP49767 419 aa17.51■□□□□ 0.39
C9orf3-213ENST00000471978 CX3CL1P78423 397 aa17.51■□□□□ 0.39
C9orf3-213ENST00000471978 ASPHD1Q5U4P2 390 aa17.51■□□□□ 0.39
C9orf3-213ENST00000471978 CCDC90BQ9GZT6 254 aa17.51■□□□□ 0.39
C9orf3-213ENST00000471978 C12orf4Q9NQ89 552 aa17.51■□□□□ 0.39
C9orf3-213ENST00000471978 WASHC3Q9Y3C0 194 aa17.51■□□□□ 0.39
C9orf3-213ENST00000471978 LSM4Q9Y4Z0 139 aaKnown RBP17.51■□□□□ 0.39
C9orf3-213ENST00000471978 FCN1O00602 326 aa17.5■□□□□ 0.39
C9orf3-213ENST00000471978 SCTP09683 121 aa17.5■□□□□ 0.39
C9orf3-213ENST00000471978 CPEP16870 476 aa17.5■□□□□ 0.39
C9orf3-213ENST00000471978 TMEM50BP56557 158 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms