RNA–Protein interactions for RNA: ENST00000467182.1

COL4A1-202, Transcript of collagen type IV alpha 1 chain, humanhuman

TSL 3

Gene COL4A1, Length 593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1-202ENST00000467182 SHPKQ9UHJ6 478 aa10.64□□□□□ -0.71
COL4A1-202ENST00000467182 GAB2Q9UQC2 676 aa10.64□□□□□ -0.71
COL4A1-202ENST00000467182 POLR3KQ9Y2Y1 108 aaPredicted RBP10.64□□□□□ -0.71
COL4A1-202ENST00000467182 GCN1Q92616 2671 aaKnown RBP10.64□□□□□ -0.71
COL4A1-202ENST00000467182 A0A1W2PPE3 182 aa10.63□□□□□ -0.71
COL4A1-202ENST00000467182 A8MV72 311 aaPredicted RBP10.63□□□□□ -0.71
COL4A1-202ENST00000467182 TNFSF12O43508 249 aa10.63□□□□□ -0.71
COL4A1-202ENST00000467182 SSNA1O43805 119 aa10.63□□□□□ -0.71
COL4A1-202ENST00000467182 PFDN1O60925 122 aa10.63□□□□□ -0.71
COL4A1-202ENST00000467182 LIPFP07098 398 aa10.63□□□□□ -0.71
COL4A1-202ENST00000467182 OR5AC1P0C628 307 aa10.63□□□□□ -0.71
COL4A1-202ENST00000467182 DNASE1P24855 282 aa10.63□□□□□ -0.71
COL4A1-202ENST00000467182 CD34P28906 385 aa10.63□□□□□ -0.71
COL4A1-202ENST00000467182 CLEC12BQ2HXU8 276 aa10.63□□□□□ -0.71
COL4A1-202ENST00000467182 LIN54Q6MZP7 749 aa10.63□□□□□ -0.71
COL4A1-202ENST00000467182 KCTD9Q7L273 389 aa10.63□□□□□ -0.71
COL4A1-202ENST00000467182 AKAP14Q86UN6 197 aa10.63□□□□□ -0.71
COL4A1-202ENST00000467182 KRTAP1-3Q8IUG1 177 aa10.63□□□□□ -0.71
COL4A1-202ENST00000467182 SGPP2Q8IWX5 399 aa10.63□□□□□ -0.71
COL4A1-202ENST00000467182 LINC00311Q8N616 119 aa10.63□□□□□ -0.71
COL4A1-202ENST00000467182 C8orf31Q8N9H6 132 aa10.63□□□□□ -0.71
COL4A1-202ENST00000467182 ZBTB34Q8NCN2 500 aa10.63□□□□□ -0.71
COL4A1-202ENST00000467182 GLYATL2Q8WU03 294 aa10.63□□□□□ -0.71
COL4A1-202ENST00000467182 MSI2Q96DH6 328 aaKnown RBP10.63□□□□□ -0.71
COL4A1-202ENST00000467182 ZNF251Q9BRH9 671 aa10.63□□□□□ -0.71
COL4A1-202ENST00000467182 SUCNR1Q9BXA5 334 aa10.63□□□□□ -0.71
COL4A1-202ENST00000467182 ZNRD1Q9P1U0 126 aa10.63□□□□□ -0.71
COL4A1-202ENST00000467182 KCNS2Q9ULS6 477 aa10.63□□□□□ -0.71
COL4A1-202ENST00000467182 RBM7Q9Y580 266 aaKnown RBP10.63□□□□□ -0.71
COL4A1-202ENST00000467182 SESN1Q9Y6P5 492 aa10.63□□□□□ -0.71
COL4A1-202ENST00000467182 ARHGAP32A7KAX9 2087 aa10.62□□□□□ -0.71
COL4A1-202ENST00000467182 TACC2O95359 2948 aa10.62□□□□□ -0.71
COL4A1-202ENST00000467182 TEX13DA0A0J9YY54 714 aaPredicted RBP10.62□□□□□ -0.71
COL4A1-202ENST00000467182 C3orf85A0A1B0GTC6 90 aa10.62□□□□□ -0.71
COL4A1-202ENST00000467182 A0A1W2PPH5 198 aa10.62□□□□□ -0.71
COL4A1-202ENST00000467182 SLC22A5O76082 557 aa10.62□□□□□ -0.71
COL4A1-202ENST00000467182 IFNA2P01563 188 aa10.62□□□□□ -0.71
COL4A1-202ENST00000467182 HLA-GP17693 338 aa10.62□□□□□ -0.71
COL4A1-202ENST00000467182 F2RP25116 425 aa10.62□□□□□ -0.71
COL4A1-202ENST00000467182 GNG10P50151 68 aa10.62□□□□□ -0.71
COL4A1-202ENST00000467182 DLX1P56177 255 aa10.62□□□□□ -0.71
COL4A1-202ENST00000467182 RPL30P62888 115 aaKnown RBP10.62□□□□□ -0.71
COL4A1-202ENST00000467182 SP6Q3SY56 376 aa10.62□□□□□ -0.71
COL4A1-202ENST00000467182 CMTM1Q8IZ96 169 aa10.62□□□□□ -0.71
COL4A1-202ENST00000467182 LRTM2Q8N967 370 aa10.62□□□□□ -0.71
COL4A1-202ENST00000467182 LHFPL5Q8TAF8 219 aa10.62□□□□□ -0.71
COL4A1-202ENST00000467182 RAB39BQ96DA2 213 aa10.62□□□□□ -0.71
COL4A1-202ENST00000467182 WDR89Q96FK6 387 aaPredicted RBP10.62□□□□□ -0.71
COL4A1-202ENST00000467182 DMRTB1Q96MA1 342 aa10.62□□□□□ -0.71
COL4A1-202ENST00000467182 TMEM133Q9H2Q1 129 aa10.62□□□□□ -0.71
COL4A1-202ENST00000467182 MGAT4CQ9UBM8 478 aa10.62□□□□□ -0.71
COL4A1-202ENST00000467182 CSMD2Q7Z408 3487 aa10.62□□□□□ -0.71
COL4A1-202ENST00000467182 ABCA2Q9BZC7 2435 aa10.62□□□□□ -0.71
COL4A1-202ENST00000467182 IGHV2-70DA0A0C4DH43 119 aa10.61□□□□□ -0.71
COL4A1-202ENST00000467182 H0Y980 276 aa10.61□□□□□ -0.71
COL4A1-202ENST00000467182 M0R1W7 72 aa10.61□□□□□ -0.71
COL4A1-202ENST00000467182 CCNKO75909 580 aa10.61□□□□□ -0.71
COL4A1-202ENST00000467182 UCP1P25874 307 aa10.61□□□□□ -0.71
COL4A1-202ENST00000467182 GPR12P47775 334 aa10.61□□□□□ -0.71
COL4A1-202ENST00000467182 RAB7AP51149 207 aa10.61□□□□□ -0.71
COL4A1-202ENST00000467182 H2BFSP57053 126 aa10.61□□□□□ -0.71
COL4A1-202ENST00000467182 BRWD1-AS2P59051 145 aa10.61□□□□□ -0.71
COL4A1-202ENST00000467182 LCN2P80188 198 aa10.61□□□□□ -0.71
COL4A1-202ENST00000467182 RPL39P5Q59GN2 51 aa10.61□□□□□ -0.71
COL4A1-202ENST00000467182 HCP5Q6MZN7 132 aa10.61□□□□□ -0.71
COL4A1-202ENST00000467182 BTNL3Q6UXE8 466 aa10.61□□□□□ -0.71
COL4A1-202ENST00000467182 LIAT1Q6ZQX7 453 aa10.61□□□□□ -0.71
COL4A1-202ENST00000467182 KIR3DL3Q8N743 410 aa10.61□□□□□ -0.71
COL4A1-202ENST00000467182 FYTTD1Q96QD9 318 aaKnown RBP10.61□□□□□ -0.71
COL4A1-202ENST00000467182 PHB2Q99623 299 aa10.61□□□□□ -0.71
COL4A1-202ENST00000467182 TMEM222Q9H0R3 208 aa10.61□□□□□ -0.71
COL4A1-202ENST00000467182 RANGRFQ9HD47 186 aaPredicted RBP10.61□□□□□ -0.71
COL4A1-202ENST00000467182 MMP26Q9NRE1 261 aa10.61□□□□□ -0.71
COL4A1-202ENST00000467182 PIPOXQ9P0Z9 390 aa10.61□□□□□ -0.71
COL4A1-202ENST00000467182 ONECUT1Q9UBC0 465 aa10.61□□□□□ -0.71
COL4A1-202ENST00000467182 PTPN13Q12923 2485 aa10.61□□□□□ -0.71
COL4A1-202ENST00000467182 SAA2-SAA4A0A096LPE2 208 aa10.6□□□□□ -0.71
COL4A1-202ENST00000467182 LINC00473A8K010 186 aa10.6□□□□□ -0.71
COL4A1-202ENST00000467182 J3QR06 171 aa10.6□□□□□ -0.71
COL4A1-202ENST00000467182 GOSR2O14653 212 aa10.6□□□□□ -0.71
COL4A1-202ENST00000467182 ENSAO43768 121 aaKnown RBP10.6□□□□□ -0.71
COL4A1-202ENST00000467182 OR2A4O95047 310 aa10.6□□□□□ -0.71
COL4A1-202ENST00000467182 SIX6O95475 246 aa10.6□□□□□ -0.71
COL4A1-202ENST00000467182 SAA2P0DJI9 122 aaPredicted RBP10.6□□□□□ -0.71
COL4A1-202ENST00000467182 SLC25A16P16260 332 aa10.6□□□□□ -0.71
COL4A1-202ENST00000467182 DUTP33316 252 aaKnown RBP10.6□□□□□ -0.71
COL4A1-202ENST00000467182 LINC00205P59089 165 aa10.6□□□□□ -0.71
COL4A1-202ENST00000467182 ARF6P62330 175 aa10.6□□□□□ -0.71
COL4A1-202ENST00000467182 CD83Q01151 205 aa10.6□□□□□ -0.71
COL4A1-202ENST00000467182 PRB3Q04118 309 aaPredicted RBP10.6□□□□□ -0.71
COL4A1-202ENST00000467182 ZNF585BQ52M93 769 aa10.6□□□□□ -0.71
COL4A1-202ENST00000467182 DCAF12L2Q5VW00 463 aa10.6□□□□□ -0.71
COL4A1-202ENST00000467182 ZNF66Q6ZN08 573 aa10.6□□□□□ -0.71
COL4A1-202ENST00000467182 C1orf122Q6ZSJ8 110 aa10.6□□□□□ -0.71
COL4A1-202ENST00000467182 ABHD12Q8N2K0 398 aa10.6□□□□□ -0.71
COL4A1-202ENST00000467182 UXS1Q8NBZ7 420 aa10.6□□□□□ -0.71
COL4A1-202ENST00000467182 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.6□□□□□ -0.71
COL4A1-202ENST00000467182 OR5M8Q8NGP6 311 aa10.6□□□□□ -0.71
COL4A1-202ENST00000467182 COQ8AQ8NI60 647 aa10.6□□□□□ -0.71
COL4A1-202ENST00000467182 TNFRSF14Q92956 283 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms