RNA–Protein interactions for RNA: ENST00000466222.6

CAPN3-209, Transcript of calpain 3, humanhuman

TSL 2

Gene CAPN3, Length 1,934 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-209ENST00000466222 SFTA3P0C7M3 94 aa15.53■□□□□ 0.08
CAPN3-209ENST00000466222 TNFRSF1AP19438 455 aa15.53■□□□□ 0.08
CAPN3-209ENST00000466222 TESK1Q15569 626 aa15.53■□□□□ 0.08
CAPN3-209ENST00000466222 MPV17LQ2QL34 196 aa15.53■□□□□ 0.08
CAPN3-209ENST00000466222 CD177Q8N6Q3 437 aa15.53■□□□□ 0.08
CAPN3-209ENST00000466222 CLEC18CQ8NCF0 446 aa15.53■□□□□ 0.08
CAPN3-209ENST00000466222 EGLN1Q9GZT9 426 aa15.53■□□□□ 0.08
CAPN3-209ENST00000466222 STRAPQ9Y3F4 350 aaKnown RBP15.53■□□□□ 0.08
CAPN3-209ENST00000466222 IGKV1D-17A0A075B6S4 117 aa15.53■□□□□ 0.08
CAPN3-209ENST00000466222 SLC33A1O00400 549 aaPredicted RBP15.53■□□□□ 0.08
CAPN3-209ENST00000466222 CDS2O95674 445 aa15.53■□□□□ 0.08
CAPN3-209ENST00000466222 PSG2P11465 335 aa15.53■□□□□ 0.08
CAPN3-209ENST00000466222 CDKN1AP38936 164 aa15.53■□□□□ 0.08
CAPN3-209ENST00000466222 NPBWR1P48145 328 aa15.53■□□□□ 0.08
CAPN3-209ENST00000466222 TMEM88Q6PEY1 159 aa15.53■□□□□ 0.08
CAPN3-209ENST00000466222 LYZL2Q7Z4W2 148 aa15.53■□□□□ 0.08
CAPN3-209ENST00000466222 FAM219AQ8IW50 185 aa15.53■□□□□ 0.08
CAPN3-209ENST00000466222 Q8TCH9 128 aa15.53■□□□□ 0.08
CAPN3-209ENST00000466222 GLYATL2Q8WU03 294 aa15.53■□□□□ 0.08
CAPN3-209ENST00000466222 ABHD14BQ96IU4 210 aa15.53■□□□□ 0.08
CAPN3-209ENST00000466222 FAM96BQ9Y3D0 163 aa15.53■□□□□ 0.08
CAPN3-209ENST00000466222 HELZ2Q9BYK8 2649 aaKnown RBP15.52■□□□□ 0.07
CAPN3-209ENST00000466222 COL8A2P25067 703 aa15.52■□□□□ 0.07
CAPN3-209ENST00000466222 PAX6P26367 422 aa15.52■□□□□ 0.07
CAPN3-209ENST00000466222 RND3P61587 244 aa15.52■□□□□ 0.07
CAPN3-209ENST00000466222 SP6Q3SY56 376 aa15.52■□□□□ 0.07
CAPN3-209ENST00000466222 PHLDA2Q53GA4 152 aa15.52■□□□□ 0.07
CAPN3-209ENST00000466222 CBLN2Q8IUK8 224 aa15.52■□□□□ 0.07
CAPN3-209ENST00000466222 KIRREL1Q96J84 757 aa15.52■□□□□ 0.07
CAPN3-209ENST00000466222 WIPI2Q9Y4P8 454 aa15.52■□□□□ 0.07
CAPN3-209ENST00000466222 CENPEQ02224 2701 aa15.52■□□□□ 0.07
CAPN3-209ENST00000466222 USP9YO00507 2555 aaPredicted RBP15.52■□□□□ 0.07
CAPN3-209ENST00000466222 CACNA1DQ01668 2161 aa15.52■□□□□ 0.07
CAPN3-209ENST00000466222 DUXBA0A1W2PPF3 345 aa15.51■□□□□ 0.07
CAPN3-209ENST00000466222 SH2D1BO14796 132 aa15.51■□□□□ 0.07
CAPN3-209ENST00000466222 NDUFS7O75251 213 aa15.51■□□□□ 0.07
CAPN3-209ENST00000466222 DIRAS3O95661 229 aa15.51■□□□□ 0.07
CAPN3-209ENST00000466222 PPYP01298 95 aa15.51■□□□□ 0.07
CAPN3-209ENST00000466222 AADACP22760 399 aa15.51■□□□□ 0.07
CAPN3-209ENST00000466222 SMIM21Q3B7S5 101 aa15.51■□□□□ 0.07
CAPN3-209ENST00000466222 SPIN3Q5JUX0 258 aa15.51■□□□□ 0.07
CAPN3-209ENST00000466222 DUX4L9Q6RFH8 374 aaPredicted RBP15.51■□□□□ 0.07
CAPN3-209ENST00000466222 C20orf204Q6ZNR8 217 aa15.51■□□□□ 0.07
CAPN3-209ENST00000466222 DTX2Q86UW9 622 aa15.51■□□□□ 0.07
CAPN3-209ENST00000466222 FAM90A1Q86YD7 464 aa15.51■□□□□ 0.07
CAPN3-209ENST00000466222 NEK7Q8TDX7 302 aa15.51■□□□□ 0.07
CAPN3-209ENST00000466222 SPIN2AQ99865 258 aa15.51■□□□□ 0.07
CAPN3-209ENST00000466222 SPIN2BQ9BPZ2 258 aa15.51■□□□□ 0.07
CAPN3-209ENST00000466222 PLA2G2EQ9NZK7 142 aa15.51■□□□□ 0.07
CAPN3-209ENST00000466222 PHF1O43189 567 aaPredicted RBP15.51■□□□□ 0.07
CAPN3-209ENST00000466222 TSPAN15O95858 294 aa15.51■□□□□ 0.07
CAPN3-209ENST00000466222 SPP1P10451 314 aa15.51■□□□□ 0.07
CAPN3-209ENST00000466222 PRDX2P32119 198 aa15.51■□□□□ 0.07
CAPN3-209ENST00000466222 GABRA2P47869 451 aa15.51■□□□□ 0.07
CAPN3-209ENST00000466222 PPOXP50336 477 aa15.51■□□□□ 0.07
CAPN3-209ENST00000466222 COL10A1Q03692 680 aa15.51■□□□□ 0.07
CAPN3-209ENST00000466222 GNMTQ14749 295 aa15.51■□□□□ 0.07
CAPN3-209ENST00000466222 PEA15Q15121 130 aa15.51■□□□□ 0.07
CAPN3-209ENST00000466222 OR4D5Q8NGN0 318 aa15.51■□□□□ 0.07
CAPN3-209ENST00000466222 ERGIC1Q969X5 290 aa15.51■□□□□ 0.07
CAPN3-209ENST00000466222 SMIM3Q9BZL3 60 aa15.51■□□□□ 0.07
CAPN3-209ENST00000466222 TMEM106BQ9NUM4 274 aa15.51■□□□□ 0.07
CAPN3-209ENST00000466222 NBPF19A0A087WUL8 3843 aa15.5■□□□□ 0.07
CAPN3-209ENST00000466222 TRAV39A0A0B4J263 110 aa15.5■□□□□ 0.07
CAPN3-209ENST00000466222 IGHV1-69-2A0A0G2JMI3 117 aa15.5■□□□□ 0.07
CAPN3-209ENST00000466222 MEX3AA1L020 520 aaKnown RBP15.5■□□□□ 0.07
CAPN3-209ENST00000466222 FAM157AC9JC47 383 aa15.5■□□□□ 0.07
CAPN3-209ENST00000466222 TMEM178BH3BS89 294 aa15.5■□□□□ 0.07
CAPN3-209ENST00000466222 SELLP14151 372 aa15.5■□□□□ 0.07
CAPN3-209ENST00000466222 LINC00596Q86U02 117 aa15.5■□□□□ 0.07
CAPN3-209ENST00000466222 OR11L1Q8NGX0 322 aa15.5■□□□□ 0.07
CAPN3-209ENST00000466222 PLPPR1Q8TBJ4 325 aa15.5■□□□□ 0.07
CAPN3-209ENST00000466222 PLEKHF2Q9H8W4 249 aa15.5■□□□□ 0.07
CAPN3-209ENST00000466222 C3orf85A0A1B0GTC6 90 aa15.49■□□□□ 0.07
CAPN3-209ENST00000466222 MPPED1O15442 326 aa15.49■□□□□ 0.07
CAPN3-209ENST00000466222 CTXN2P0C2S0 81 aa15.49■□□□□ 0.07
CAPN3-209ENST00000466222 IRF2P14316 349 aa15.49■□□□□ 0.07
CAPN3-209ENST00000466222 ZNRF1Q8ND25 227 aa15.49■□□□□ 0.07
CAPN3-209ENST00000466222 IFT22Q9H7X7 185 aa15.49■□□□□ 0.07
CAPN3-209ENST00000466222 PIGBOS1A0A0B4J2F0 54 aa15.49■□□□□ 0.07
CAPN3-209ENST00000466222 TRDCB7Z8K6 153 aa15.49■□□□□ 0.07
CAPN3-209ENST00000466222 GYPAP02724 150 aa15.49■□□□□ 0.07
CAPN3-209ENST00000466222 LINC00518Q8N0U6 118 aa15.49■□□□□ 0.07
CAPN3-209ENST00000466222 TMEM56Q96MV1 263 aa15.49■□□□□ 0.07
CAPN3-209ENST00000466222 TMEM222Q9H0R3 208 aa15.49■□□□□ 0.07
CAPN3-209ENST00000466222 Q9N2K0 584 aa15.49■□□□□ 0.07
CAPN3-209ENST00000466222 SMCO4Q9NRQ5 59 aa15.49■□□□□ 0.07
CAPN3-209ENST00000466222 RCL1Q9Y2P8 373 aaKnown RBP15.49■□□□□ 0.07
CAPN3-209ENST00000466222 TMEM56-RWDD3S4R434 201 aa15.49■□□□□ 0.07
CAPN3-209ENST00000466222 KIR2DS1A0A191URI9 304 aa15.48■□□□□ 0.07
CAPN3-209ENST00000466222 SNCAP37840 140 aa15.48■□□□□ 0.07
CAPN3-209ENST00000466222 KIR2DS4P43632 304 aa15.48■□□□□ 0.07
CAPN3-209ENST00000466222 HOXA1P49639 335 aaPredicted RBP15.48■□□□□ 0.07
CAPN3-209ENST00000466222 RAB13P51153 203 aa15.48■□□□□ 0.07
CAPN3-209ENST00000466222 KIR2DS1Q14954 304 aa15.48■□□□□ 0.07
CAPN3-209ENST00000466222 AVPI1Q5T686 147 aa15.48■□□□□ 0.07
CAPN3-209ENST00000466222 FIP1L1Q6UN15 594 aaKnown RBP15.48■□□□□ 0.07
CAPN3-209ENST00000466222 TPRX1Q8N7U7 411 aa15.48■□□□□ 0.07
CAPN3-209ENST00000466222 LFNGQ8NES3 379 aa15.48■□□□□ 0.07
CAPN3-209ENST00000466222 DMBX1Q8NFW5 382 aa15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms