RNA–Protein interactions for RNA: ENST00000464750.5

U2AF1-206, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 966 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-206ENST00000464750 RITA1Q96K30 269 aa20.28■□□□□ 0.84
U2AF1-206ENST00000464750 C12orf4Q9NQ89 552 aa20.28■□□□□ 0.84
U2AF1-206ENST00000464750 PIPOXQ9P0Z9 390 aa20.28■□□□□ 0.84
U2AF1-206ENST00000464750 SLC23A1Q9UHI7 598 aa20.28■□□□□ 0.84
U2AF1-206ENST00000464750 ZNF580Q9UK33 172 aa20.28■□□□□ 0.84
U2AF1-206ENST00000464750 NBR2O15453 112 aa20.27■□□□□ 0.84
U2AF1-206ENST00000464750 HOXD3P31249 432 aaPredicted RBP20.27■□□□□ 0.84
U2AF1-206ENST00000464750 RNF152Q8N8N0 203 aa20.27■□□□□ 0.84
U2AF1-206ENST00000464750 DPF1Q92782 380 aa20.27■□□□□ 0.84
U2AF1-206ENST00000464750 RAX2Q96IS3 184 aa20.27■□□□□ 0.84
U2AF1-206ENST00000464750 KCTD7Q96MP8 289 aa20.27■□□□□ 0.84
U2AF1-206ENST00000464750 OR1A1Q9P1Q5 309 aa20.27■□□□□ 0.84
U2AF1-206ENST00000464750 MGAT4AQ9UM21 535 aa20.27■□□□□ 0.84
U2AF1-206ENST00000464750 RAB29O14966 203 aa20.26■□□□□ 0.83
U2AF1-206ENST00000464750 IGHG4P01861 327 aa20.26■□□□□ 0.83
U2AF1-206ENST00000464750 TMEM50BP56557 158 aa20.26■□□□□ 0.83
U2AF1-206ENST00000464750 KRTAP10-11P60412 298 aa20.26■□□□□ 0.83
U2AF1-206ENST00000464750 C2orf76Q3KRA6 126 aa20.26■□□□□ 0.83
U2AF1-206ENST00000464750 RPL39P5Q59GN2 51 aa20.26■□□□□ 0.83
U2AF1-206ENST00000464750 HES5Q5TA89 166 aa20.26■□□□□ 0.83
U2AF1-206ENST00000464750 FAM131AQ6UXB0 335 aa20.26■□□□□ 0.83
U2AF1-206ENST00000464750 OR56B1Q8NGI3 324 aa20.26■□□□□ 0.83
U2AF1-206ENST00000464750 MCRIP2Q9BUT9 160 aaKnown RBP20.26■□□□□ 0.83
U2AF1-206ENST00000464750 PECRQ9BY49 303 aa20.26■□□□□ 0.83
U2AF1-206ENST00000464750 Q9N2K0 584 aa20.26■□□□□ 0.83
U2AF1-206ENST00000464750 K7EIL1 84 aa20.25■□□□□ 0.83
U2AF1-206ENST00000464750 CCL24O00175 119 aa20.25■□□□□ 0.83
U2AF1-206ENST00000464750 HLA-DRB1P01911 266 aa20.25■□□□□ 0.83
U2AF1-206ENST00000464750 OR5H8P0DN80 308 aa20.25■□□□□ 0.83
U2AF1-206ENST00000464750 RANBP1P43487 201 aa20.25■□□□□ 0.83
U2AF1-206ENST00000464750 PSMD7P51665 324 aa20.25■□□□□ 0.83
U2AF1-206ENST00000464750 DEFB136Q30KP8 78 aa20.25■□□□□ 0.83
U2AF1-206ENST00000464750 ABHD14BQ96IU4 210 aa20.25■□□□□ 0.83
U2AF1-206ENST00000464750 CMSS1Q9BQ75 279 aaKnown RBP20.25■□□□□ 0.83
U2AF1-206ENST00000464750 KIAA1456Q9P272 454 aa20.25■□□□□ 0.83
U2AF1-206ENST00000464750 RAB26Q9ULW5 256 aa20.25■□□□□ 0.83
U2AF1-206ENST00000464750 TMEM272A0A1B0GTI8 110 aa20.24■□□□□ 0.83
U2AF1-206ENST00000464750 ITGB1BP1O14713 200 aa20.24■□□□□ 0.83
U2AF1-206ENST00000464750 LDLRAD4O15165 306 aa20.24■□□□□ 0.83
U2AF1-206ENST00000464750 HSPA12AO43301 675 aa20.24■□□□□ 0.83
U2AF1-206ENST00000464750 DENRO43583 198 aaKnown RBP20.24■□□□□ 0.83
U2AF1-206ENST00000464750 ZBTB25P24278 435 aa20.24■□□□□ 0.83
U2AF1-206ENST00000464750 CDX1P47902 265 aaPredicted RBP20.24■□□□□ 0.83
U2AF1-206ENST00000464750 RAB25P57735 213 aa20.24■□□□□ 0.83
U2AF1-206ENST00000464750 EGFEM1PQ0D2K5 195 aa20.24■□□□□ 0.83
U2AF1-206ENST00000464750 PLA2G7Q13093 441 aa20.24■□□□□ 0.83
U2AF1-206ENST00000464750 C5orf64Q2M2E5 130 aa20.24■□□□□ 0.83
U2AF1-206ENST00000464750 PLAC9Q5JTB6 97 aa20.24■□□□□ 0.83
U2AF1-206ENST00000464750 NPBQ8NG41 125 aa20.24■□□□□ 0.83
U2AF1-206ENST00000464750 OR8U1Q8NH10 309 aa20.24■□□□□ 0.83
U2AF1-206ENST00000464750 EDARADDQ8WWZ3 215 aa20.24■□□□□ 0.83
U2AF1-206ENST00000464750 PARP11Q9NR21 331 aa20.24■□□□□ 0.83
U2AF1-206ENST00000464750 NDUFB11Q9NX14 153 aa20.24■□□□□ 0.83
U2AF1-206ENST00000464750 IGHV7-81A0A0B4J1V7 117 aa20.23■□□□□ 0.83
U2AF1-206ENST00000464750 ATP6V0E1O15342 81 aa20.23■□□□□ 0.83
U2AF1-206ENST00000464750 NDUFA3O95167 84 aa20.23■□□□□ 0.83
U2AF1-206ENST00000464750 SCTP09683 121 aa20.23■□□□□ 0.83
U2AF1-206ENST00000464750 CT45A6P0DMU7 189 aa20.23■□□□□ 0.83
U2AF1-206ENST00000464750 CT45A5P0DMU8 189 aa20.23■□□□□ 0.83
U2AF1-206ENST00000464750 CT45A7P0DMV0 189 aa20.23■□□□□ 0.83
U2AF1-206ENST00000464750 PSMB8P28062 276 aa20.23■□□□□ 0.83
U2AF1-206ENST00000464750 CEACAM6P40199 344 aa20.23■□□□□ 0.83
U2AF1-206ENST00000464750 GLDNQ6ZMI3 551 aaPredicted RBP20.23■□□□□ 0.83
U2AF1-206ENST00000464750 C11orf54Q9H0W9 315 aaPredicted RBP20.23■□□□□ 0.83
U2AF1-206ENST00000464750 OR51J1Q9H342 316 aa20.23■□□□□ 0.83
U2AF1-206ENST00000464750 SHISA3A0PJX4 238 aa20.22■□□□□ 0.83
U2AF1-206ENST00000464750 OR5H14A6NHG9 310 aa20.22■□□□□ 0.83
U2AF1-206ENST00000464750 PDCD5O14737 125 aa20.22■□□□□ 0.83
U2AF1-206ENST00000464750 MYL9P24844 172 aa20.22■□□□□ 0.83
U2AF1-206ENST00000464750 OR10A3P58181 314 aa20.22■□□□□ 0.83
U2AF1-206ENST00000464750 KIR2DS1Q14954 304 aa20.22■□□□□ 0.83
U2AF1-206ENST00000464750 CHCHD6Q9BRQ6 235 aa20.22■□□□□ 0.83
U2AF1-206ENST00000464750 AGMATQ9BSE5 352 aa20.22■□□□□ 0.83
U2AF1-206ENST00000464750 RAB22AQ9UL26 194 aa20.22■□□□□ 0.83
U2AF1-206ENST00000464750 WSB1Q9Y6I7 421 aa20.22■□□□□ 0.83
U2AF1-206ENST00000464750 TRAV1-2A0A0B4J238 106 aa20.21■□□□□ 0.83
U2AF1-206ENST00000464750 WI2-2373I1.2A0A1W2PRP0 233 aa20.21■□□□□ 0.83
U2AF1-206ENST00000464750 G3V318 75 aa20.21■□□□□ 0.83
U2AF1-206ENST00000464750 H0YJW9 148 aa20.21■□□□□ 0.83
U2AF1-206ENST00000464750 GABARAPL2P60520 117 aa20.21■□□□□ 0.83
U2AF1-206ENST00000464750 LIN54Q6MZP7 749 aa20.21■□□□□ 0.83
U2AF1-206ENST00000464750 CD200R1LQ6Q8B3 271 aa20.21■□□□□ 0.83
U2AF1-206ENST00000464750 C4orf3Q8WVX3 66 aa20.21■□□□□ 0.83
U2AF1-206ENST00000464750 GHITMQ9H3K2 345 aa20.21■□□□□ 0.83
U2AF1-206ENST00000464750 PPIFP30405 207 aaKnown RBP20.2■□□□□ 0.82
U2AF1-206ENST00000464750 WASHC3Q9Y3C0 194 aa20.2■□□□□ 0.82
U2AF1-206ENST00000464750 IGKV1-6A0A0C4DH72 117 aa20.19■□□□□ 0.82
U2AF1-206ENST00000464750 TRDCB7Z8K6 153 aa20.19■□□□□ 0.82
U2AF1-206ENST00000464750 H7C2Y5 167 aa20.19■□□□□ 0.82
U2AF1-206ENST00000464750 ATP6V1G2O95670 118 aa20.19■□□□□ 0.82
U2AF1-206ENST00000464750 MC5RP33032 325 aa20.19■□□□□ 0.82
U2AF1-206ENST00000464750 MRPS15P82914 257 aaKnown RBP20.19■□□□□ 0.82
U2AF1-206ENST00000464750 NDPQ00604 133 aa20.19■□□□□ 0.82
U2AF1-206ENST00000464750 MOGAT2Q3SYC2 334 aa20.19■□□□□ 0.82
U2AF1-206ENST00000464750 OR5AN1Q8NGI8 311 aa20.19■□□□□ 0.82
U2AF1-206ENST00000464750 MYOZ3Q8TDC0 251 aa20.19■□□□□ 0.82
U2AF1-206ENST00000464750 PTX4Q96A99 478 aa20.19■□□□□ 0.82
U2AF1-206ENST00000464750 RAB3CQ96E17 227 aa20.19■□□□□ 0.82
U2AF1-206ENST00000464750 FBXL15Q9H469 300 aa20.19■□□□□ 0.82
U2AF1-206ENST00000464750 TRAV41A0A0B4J266 112 aa20.18■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms