RNA–Protein interactions for RNA: ENST00000460162.1

PTPN4-207, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 4

Gene PTPN4, Length 623 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-207ENST00000460162 SEC14L6B5MCN3 397 aa17.75■□□□□ 0.43
PTPN4-207ENST00000460162 G3V318 75 aa17.75■□□□□ 0.43
PTPN4-207ENST00000460162 ITGB1BP1O14713 200 aa17.75■□□□□ 0.43
PTPN4-207ENST00000460162 IGLV1-40P01703 118 aa17.75■□□□□ 0.43
PTPN4-207ENST00000460162 RUNX1Q01196 453 aa17.75■□□□□ 0.43
PTPN4-207ENST00000460162 TRAM1Q15629 374 aa17.75■□□□□ 0.43
PTPN4-207ENST00000460162 LIN54Q6MZP7 749 aa17.75■□□□□ 0.43
PTPN4-207ENST00000460162 FAM131AQ6UXB0 335 aa17.75■□□□□ 0.43
PTPN4-207ENST00000460162 OR11H1Q8NG94 326 aa17.75■□□□□ 0.43
PTPN4-207ENST00000460162 SETD6Q8TBK2 473 aa17.75■□□□□ 0.43
PTPN4-207ENST00000460162 LPAR5Q9H1C0 372 aa17.75■□□□□ 0.43
PTPN4-207ENST00000460162 GHITMQ9H3K2 345 aa17.75■□□□□ 0.43
PTPN4-207ENST00000460162 MGAT4AQ9UM21 535 aa17.75■□□□□ 0.43
PTPN4-207ENST00000460162 TPRKBQ9Y3C4 175 aa17.75■□□□□ 0.43
PTPN4-207ENST00000460162 WSB1Q9Y6I7 421 aa17.75■□□□□ 0.43
PTPN4-207ENST00000460162 SLC17A2O00624 439 aa17.74■□□□□ 0.43
PTPN4-207ENST00000460162 OR8U8P0C7N1 319 aa17.74■□□□□ 0.43
PTPN4-207ENST00000460162 PSMA1P25786 263 aaKnown RBP17.74■□□□□ 0.43
PTPN4-207ENST00000460162 ZNF491Q8N8L2 437 aa17.74■□□□□ 0.43
PTPN4-207ENST00000460162 PLGRKTQ9HBL7 147 aa17.74■□□□□ 0.43
PTPN4-207ENST00000460162 VSIG4Q9Y279 399 aa17.74■□□□□ 0.43
PTPN4-207ENST00000460162 ARL6IP5O75915 188 aa17.73■□□□□ 0.43
PTPN4-207ENST00000460162 ARSBP15848 533 aa17.73■□□□□ 0.43
PTPN4-207ENST00000460162 AQP4P55087 323 aa17.73■□□□□ 0.43
PTPN4-207ENST00000460162 HLA-DRB3P79483 266 aa17.73■□□□□ 0.43
PTPN4-207ENST00000460162 TPBGQ13641 420 aa17.73■□□□□ 0.43
PTPN4-207ENST00000460162 FAM89BQ8N5H3 189 aa17.73■□□□□ 0.43
PTPN4-207ENST00000460162 EDARADDQ8WWZ3 215 aa17.73■□□□□ 0.43
PTPN4-207ENST00000460162 TMEM203Q969S6 136 aa17.73■□□□□ 0.43
PTPN4-207ENST00000460162 KLK15Q9H2R5 256 aa17.73■□□□□ 0.43
PTPN4-207ENST00000460162 GNB4Q9HAV0 340 aa17.73■□□□□ 0.43
PTPN4-207ENST00000460162 ISYNA1Q9NPH2 558 aa17.73■□□□□ 0.43
PTPN4-207ENST00000460162 C12orf4Q9NQ89 552 aa17.73■□□□□ 0.43
PTPN4-207ENST00000460162 AK3Q9UIJ7 227 aa17.73■□□□□ 0.43
PTPN4-207ENST00000460162 HSF4Q9ULV5 492 aa17.73■□□□□ 0.43
PTPN4-207ENST00000460162 I3L521 148 aa17.72■□□□□ 0.43
PTPN4-207ENST00000460162 MC5RP33032 325 aa17.72■□□□□ 0.43
PTPN4-207ENST00000460162 CRIP2P52943 208 aaPredicted RBP17.72■□□□□ 0.43
PTPN4-207ENST00000460162 NDPQ00604 133 aa17.72■□□□□ 0.43
PTPN4-207ENST00000460162 ZNF616Q08AN1 781 aa17.72■□□□□ 0.43
PTPN4-207ENST00000460162 KIAA0141Q14154 515 aaPredicted RBP17.72■□□□□ 0.43
PTPN4-207ENST00000460162 RPL39P5Q59GN2 51 aa17.72■□□□□ 0.43
PTPN4-207ENST00000460162 MINDY2Q8NBR6 621 aa17.72■□□□□ 0.43
PTPN4-207ENST00000460162 GFI1Q99684 422 aa17.72■□□□□ 0.43
PTPN4-207ENST00000460162 DUSP21Q9H596 190 aa17.72■□□□□ 0.43
PTPN4-207ENST00000460162 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP17.72■□□□□ 0.43
PTPN4-207ENST00000460162 TENM3Q9P273 2699 aa17.71■□□□□ 0.43
PTPN4-207ENST00000460162 KMT2CQ8NEZ4 4911 aaKnown RBP17.71■□□□□ 0.43
PTPN4-207ENST00000460162 FOXI3A8MTJ6 420 aaPredicted RBP17.71■□□□□ 0.43
PTPN4-207ENST00000460162 H0YJW9 148 aa17.71■□□□□ 0.43
PTPN4-207ENST00000460162 RRHO14718 337 aa17.71■□□□□ 0.43
PTPN4-207ENST00000460162 SOCS1O15524 211 aa17.71■□□□□ 0.43
PTPN4-207ENST00000460162 RBBP9O75884 186 aa17.71■□□□□ 0.43
PTPN4-207ENST00000460162 HSMCR30P0CW71 290 aa17.71■□□□□ 0.43
PTPN4-207ENST00000460162 CT45A6P0DMU7 189 aa17.71■□□□□ 0.43
PTPN4-207ENST00000460162 CT45A5P0DMU8 189 aa17.71■□□□□ 0.43
PTPN4-207ENST00000460162 CT45A7P0DMV0 189 aa17.71■□□□□ 0.43
PTPN4-207ENST00000460162 ZBTB25P24278 435 aa17.71■□□□□ 0.43
PTPN4-207ENST00000460162 RPS25P62851 125 aaKnown RBP17.71■□□□□ 0.43
PTPN4-207ENST00000460162 MLLT11Q13015 90 aaPredicted RBP17.71■□□□□ 0.43
PTPN4-207ENST00000460162 P2RY14Q15391 338 aa17.71■□□□□ 0.43
PTPN4-207ENST00000460162 C19orf54Q5BKX5 351 aa17.71■□□□□ 0.43
PTPN4-207ENST00000460162 ZNF660Q6AZW8 331 aaPredicted RBP17.71■□□□□ 0.43
PTPN4-207ENST00000460162 TMEM91Q6ZNR0 172 aa17.71■□□□□ 0.43
PTPN4-207ENST00000460162 TCTEX1D1Q8N7M0 179 aa17.71■□□□□ 0.43
PTPN4-207ENST00000460162 AGMATQ9BSE5 352 aa17.71■□□□□ 0.43
PTPN4-207ENST00000460162 HDHD3Q9BSH5 251 aaPredicted RBP17.71■□□□□ 0.43
PTPN4-207ENST00000460162 PARP12Q9H0J9 701 aaKnown RBP17.71■□□□□ 0.43
PTPN4-207ENST00000460162 NKX1-2Q9UD57 310 aaPredicted RBP17.71■□□□□ 0.43
PTPN4-207ENST00000460162 SCOCQ9UIL1 159 aa17.71■□□□□ 0.43
PTPN4-207ENST00000460162 WASHC3Q9Y3C0 194 aa17.71■□□□□ 0.43
PTPN4-207ENST00000460162 ANKRD65E5RJM6 399 aa17.7■□□□□ 0.42
PTPN4-207ENST00000460162 RGS10O43665 173 aa17.7■□□□□ 0.42
PTPN4-207ENST00000460162 RANBP1P43487 201 aa17.7■□□□□ 0.42
PTPN4-207ENST00000460162 RAB9AP51151 201 aa17.7■□□□□ 0.42
PTPN4-207ENST00000460162 INSL3P51460 131 aa17.7■□□□□ 0.42
PTPN4-207ENST00000460162 RAB11BQ15907 218 aa17.7■□□□□ 0.42
PTPN4-207ENST00000460162 ECSCRQ19T08 205 aa17.7■□□□□ 0.42
PTPN4-207ENST00000460162 ZNF260Q3ZCT1 412 aa17.7■□□□□ 0.42
PTPN4-207ENST00000460162 ASPHD1Q5U4P2 390 aa17.7■□□□□ 0.42
PTPN4-207ENST00000460162 OR5AN1Q8NGI8 311 aa17.7■□□□□ 0.42
PTPN4-207ENST00000460162 OR1N2Q8NGR9 330 aa17.7■□□□□ 0.42
PTPN4-207ENST00000460162 ABHD14BQ96IU4 210 aa17.7■□□□□ 0.42
PTPN4-207ENST00000460162 PRR25Q96S07 402 aa17.7■□□□□ 0.42
PTPN4-207ENST00000460162 OR1A1Q9P1Q5 309 aa17.7■□□□□ 0.42
PTPN4-207ENST00000460162 AK6Q9Y3D8 172 aaKnown RBP17.7■□□□□ 0.42
PTPN4-207ENST00000460162 LSM4Q9Y4Z0 139 aaKnown RBP17.7■□□□□ 0.42
PTPN4-207ENST00000460162 HSPA12AO43301 675 aa17.69■□□□□ 0.42
PTPN4-207ENST00000460162 CPEP16870 476 aa17.69■□□□□ 0.42
PTPN4-207ENST00000460162 ECI1P42126 302 aa17.69■□□□□ 0.42
PTPN4-207ENST00000460162 GNB1P62873 340 aa17.69■□□□□ 0.42
PTPN4-207ENST00000460162 PLGLAQ15195 96 aa17.69■□□□□ 0.42
PTPN4-207ENST00000460162 GLDNQ6ZMI3 551 aaPredicted RBP17.69■□□□□ 0.42
PTPN4-207ENST00000460162 WWC2-AS2Q96NR7 200 aa17.69■□□□□ 0.42
PTPN4-207ENST00000460162 RNF5Q99942 180 aa17.69■□□□□ 0.42
PTPN4-207ENST00000460162 FBXL15Q9H469 300 aa17.69■□□□□ 0.42
PTPN4-207ENST00000460162 Q9N2K0 584 aa17.69■□□□□ 0.42
PTPN4-207ENST00000460162 FOXA2Q9Y261 457 aaPredicted RBP17.69■□□□□ 0.42
PTPN4-207ENST00000460162 FBXO7Q9Y3I1 522 aa17.69■□□□□ 0.42
PTPN4-207ENST00000460162 A0A1W2PN81 502 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 84.9 ms