RNA–Protein interactions for RNA: ENST00000456948.5

CBX3-204, Transcript of chromobox 3, humanhuman

TSL 5

Gene CBX3, Length 1,068 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-204ENST00000456948 FCGR3AP08637 254 aa18.41■□□□□ 0.54
CBX3-204ENST00000456948 GSTP1P09211 210 aaKnown RBP18.41■□□□□ 0.54
CBX3-204ENST00000456948 SAA2P0DJI9 122 aaPredicted RBP18.41■□□□□ 0.54
CBX3-204ENST00000456948 CD28P10747 220 aa18.41■□□□□ 0.54
CBX3-204ENST00000456948 SLC35B1P78383 322 aa18.41■□□□□ 0.54
CBX3-204ENST00000456948 CDNFQ49AH0 187 aa18.41■□□□□ 0.54
CBX3-204ENST00000456948 FBLN7Q53RD9 439 aa18.41■□□□□ 0.54
CBX3-204ENST00000456948 SLC35E3Q7Z769 313 aa18.41■□□□□ 0.54
CBX3-204ENST00000456948 ODF3L1Q8IXM7 274 aa18.41■□□□□ 0.54
CBX3-204ENST00000456948 Q8N6K4 173 aa18.41■□□□□ 0.54
CBX3-204ENST00000456948 LGALS14Q8TCE9 139 aa18.41■□□□□ 0.54
CBX3-204ENST00000456948 CHPT1Q8WUD6 406 aa18.41■□□□□ 0.54
CBX3-204ENST00000456948 IFI27L2Q9H2X8 130 aa18.41■□□□□ 0.54
CBX3-204ENST00000456948 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP18.41■□□□□ 0.54
CBX3-204ENST00000456948 SH2D7A6NKC9 451 aaPredicted RBP18.4■□□□□ 0.54
CBX3-204ENST00000456948 SNRPBP14678 240 aaKnown RBP18.4■□□□□ 0.54
CBX3-204ENST00000456948 MC5RP33032 325 aa18.4■□□□□ 0.54
CBX3-204ENST00000456948 OR3A3P47888 321 aa18.4■□□□□ 0.54
CBX3-204ENST00000456948 NSUN5P1Q3KNT7 163 aa18.4■□□□□ 0.54
CBX3-204ENST00000456948 Q6ZPA2 131 aa18.4■□□□□ 0.54
CBX3-204ENST00000456948 OR4F17Q8NGA8 305 aa18.4■□□□□ 0.54
CBX3-204ENST00000456948 FAM110DQ8TAY7 271 aaPredicted RBP18.4■□□□□ 0.54
CBX3-204ENST00000456948 OR4F4Q96R69 305 aa18.4■□□□□ 0.54
CBX3-204ENST00000456948 NABP2Q9BQ15 211 aa18.4■□□□□ 0.54
CBX3-204ENST00000456948 ZNF251Q9BRH9 671 aa18.4■□□□□ 0.54
CBX3-204ENST00000456948 C11orf54Q9H0W9 315 aaPredicted RBP18.4■□□□□ 0.54
CBX3-204ENST00000456948 RHBDL2Q9NX52 303 aa18.4■□□□□ 0.54
CBX3-204ENST00000456948 PSMB11A5LHX3 300 aa18.39■□□□□ 0.53
CBX3-204ENST00000456948 ZNF736B4DX44 427 aaPredicted RBP18.39■□□□□ 0.53
CBX3-204ENST00000456948 IGHG2P01859 326 aa18.39■□□□□ 0.53
CBX3-204ENST00000456948 DTYMKP23919 212 aa18.39■□□□□ 0.53
CBX3-204ENST00000456948 GPR12P47775 334 aa18.39■□□□□ 0.53
CBX3-204ENST00000456948 GNG2P59768 71 aa18.39■□□□□ 0.53
CBX3-204ENST00000456948 HACD4Q5VWC8 232 aa18.39■□□□□ 0.53
CBX3-204ENST00000456948 WIPF2Q8TF74 440 aaPredicted RBP18.39■□□□□ 0.53
CBX3-204ENST00000456948 CITED2Q99967 270 aaPredicted RBP18.39■□□□□ 0.53
CBX3-204ENST00000456948 GINS4Q9BRT9 223 aa18.39■□□□□ 0.53
CBX3-204ENST00000456948 MRPL20Q9BYC9 149 aaKnown RBP18.39■□□□□ 0.53
CBX3-204ENST00000456948 ABCG5Q9H222 651 aa18.39■□□□□ 0.53
CBX3-204ENST00000456948 DCSTAMPQ9H295 470 aa18.39■□□□□ 0.53
CBX3-204ENST00000456948 RNF167Q9H6Y7 350 aa18.39■□□□□ 0.53
CBX3-204ENST00000456948 DIABLOQ9NR28 239 aa18.39■□□□□ 0.53
CBX3-204ENST00000456948 RDH8Q9NYR8 311 aa18.39■□□□□ 0.53
CBX3-204ENST00000456948 OR1A1Q9P1Q5 309 aa18.39■□□□□ 0.53
CBX3-204ENST00000456948 A0A0A6YYH2 397 aa18.38■□□□□ 0.53
CBX3-204ENST00000456948 TCRBV4S1A1TA0A5B7 111 aa18.38■□□□□ 0.53
CBX3-204ENST00000456948 OR5H14A6NHG9 310 aa18.38■□□□□ 0.53
CBX3-204ENST00000456948 A6NJ64 397 aa18.38■□□□□ 0.53
CBX3-204ENST00000456948 BET1O15155 118 aa18.38■□□□□ 0.53
CBX3-204ENST00000456948 CTXN2P0C2S0 81 aa18.38■□□□□ 0.53
CBX3-204ENST00000456948 CLEC2LP0C7M8 214 aa18.38■□□□□ 0.53
CBX3-204ENST00000456948 PNLIPRP3Q17RR3 467 aa18.38■□□□□ 0.53
CBX3-204ENST00000456948 Q6ZS49 121 aa18.38■□□□□ 0.53
CBX3-204ENST00000456948 YIPF6Q96EC8 236 aa18.38■□□□□ 0.53
CBX3-204ENST00000456948 KIAA1456Q9P272 454 aa18.38■□□□□ 0.53
CBX3-204ENST00000456948 RBM7Q9Y580 266 aaKnown RBP18.38■□□□□ 0.53
CBX3-204ENST00000456948 AP4M1O00189 453 aa18.37■□□□□ 0.53
CBX3-204ENST00000456948 TSPAN15O95858 294 aa18.37■□□□□ 0.53
CBX3-204ENST00000456948 GSTT2P0CG29 244 aa18.37■□□□□ 0.53
CBX3-204ENST00000456948 GSTT2BP0CG30 244 aa18.37■□□□□ 0.53
CBX3-204ENST00000456948 SOX6P35712 828 aa18.37■□□□□ 0.53
CBX3-204ENST00000456948 MMDQ15546 238 aa18.37■□□□□ 0.53
CBX3-204ENST00000456948 COMMD1Q8N668 190 aa18.37■□□□□ 0.53
CBX3-204ENST00000456948 Q8N9W7 124 aa18.37■□□□□ 0.53
CBX3-204ENST00000456948 ABHD14BQ96IU4 210 aa18.37■□□□□ 0.53
CBX3-204ENST00000456948 AGMATQ9BSE5 352 aa18.37■□□□□ 0.53
CBX3-204ENST00000456948 ZNF230Q9UIE0 474 aaPredicted RBP18.37■□□□□ 0.53
CBX3-204ENST00000456948 TSSC4Q9Y5U2 329 aaPredicted RBP18.37■□□□□ 0.53
CBX3-204ENST00000456948 H7C2Y5 167 aa18.36■□□□□ 0.53
CBX3-204ENST00000456948 ACTBP60709 375 aa18.36■□□□□ 0.53
CBX3-204ENST00000456948 CD83Q01151 205 aa18.36■□□□□ 0.53
CBX3-204ENST00000456948 ZNF436-AS1Q8NC38 126 aaPredicted RBP18.36■□□□□ 0.53
CBX3-204ENST00000456948 CABLES2Q9BTV7 478 aa18.36■□□□□ 0.53
CBX3-204ENST00000456948 ST6GALNAC5Q9BVH7 336 aa18.36■□□□□ 0.53
CBX3-204ENST00000456948 TOLLIPQ9H0E2 274 aa18.36■□□□□ 0.53
CBX3-204ENST00000456948 PLSCR3Q9NRY6 295 aa18.36■□□□□ 0.53
CBX3-204ENST00000456948 RNF150Q9ULK6 438 aa18.36■□□□□ 0.53
CBX3-204ENST00000456948 SPATA2Q9UM82 520 aa18.36■□□□□ 0.53
CBX3-204ENST00000456948 TRBV6-7A0A0A0MS04 114 aa18.35■□□□□ 0.53
CBX3-204ENST00000456948 TRIM64CA6NLI5 447 aa18.35■□□□□ 0.53
CBX3-204ENST00000456948 RBBP9O75884 186 aa18.35■□□□□ 0.53
CBX3-204ENST00000456948 RPL39P5Q59GN2 51 aa18.35■□□□□ 0.53
CBX3-204ENST00000456948 R3HDM4Q96D70 268 aa18.35■□□□□ 0.53
CBX3-204ENST00000456948 RNF5Q99942 180 aa18.35■□□□□ 0.53
CBX3-204ENST00000456948 WASHC3Q9Y3C0 194 aa18.35■□□□□ 0.53
CBX3-204ENST00000456948 IGKV1-6A0A0C4DH72 117 aa18.34■□□□□ 0.53
CBX3-204ENST00000456948 F2RL1P55085 397 aa18.34■□□□□ 0.53
CBX3-204ENST00000456948 LSM3P62310 102 aaKnown RBP18.34■□□□□ 0.53
CBX3-204ENST00000456948 IGSF11Q5DX21 431 aa18.34■□□□□ 0.53
CBX3-204ENST00000456948 KHDC1LQ5JSQ8 128 aa18.34■□□□□ 0.53
CBX3-204ENST00000456948 FAM71E2Q8N5Q1 922 aa18.34■□□□□ 0.53
CBX3-204ENST00000456948 S100A16Q96FQ6 103 aaKnown RBP18.34■□□□□ 0.53
CBX3-204ENST00000456948 GAB2Q9UQC2 676 aa18.34■□□□□ 0.53
CBX3-204ENST00000456948 TMEM235A6NFC5 223 aa18.33■□□□□ 0.52
CBX3-204ENST00000456948 NBR2O15453 112 aa18.33■□□□□ 0.52
CBX3-204ENST00000456948 APOA2P02652 100 aa18.33■□□□□ 0.52
CBX3-204ENST00000456948 TFAP2AP05549 437 aa18.33■□□□□ 0.52
CBX3-204ENST00000456948 CT45A6P0DMU7 189 aa18.33■□□□□ 0.52
CBX3-204ENST00000456948 CT45A5P0DMU8 189 aa18.33■□□□□ 0.52
CBX3-204ENST00000456948 CT45A7P0DMV0 189 aa18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms