RNA–Protein interactions for RNA: ENST00000454952.1

NIF3L1-209, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 5

Gene NIF3L1, Length 719 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-209ENST00000454952 SELENOIQ9C0D9 397 aa6.2□□□□□ -1.42
NIF3L1-209ENST00000454952 SLA2Q9H6Q3 261 aa6.2□□□□□ -1.42
NIF3L1-209ENST00000454952 AMBNQ9NP70 447 aa6.2□□□□□ -1.42
NIF3L1-209ENST00000454952 BABAM2Q9NXR7 383 aa6.2□□□□□ -1.42
NIF3L1-209ENST00000454952 PIPOXQ9P0Z9 390 aa6.2□□□□□ -1.42
NIF3L1-209ENST00000454952 EXOSC1Q9Y3B2 195 aaKnown RBP6.2□□□□□ -1.42
NIF3L1-209ENST00000454952 TRBV5-5A0A0J9YX44 114 aa6.19□□□□□ -1.42
NIF3L1-209ENST00000454952 A0A1W2PP11 408 aa6.19□□□□□ -1.42
NIF3L1-209ENST00000454952 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.19□□□□□ -1.42
NIF3L1-209ENST00000454952 H0Y980 276 aa6.19□□□□□ -1.42
NIF3L1-209ENST00000454952 RRHO14718 337 aa6.19□□□□□ -1.42
NIF3L1-209ENST00000454952 RAB29O14966 203 aa6.19□□□□□ -1.42
NIF3L1-209ENST00000454952 CRTAPO75718 401 aaPredicted RBP6.19□□□□□ -1.42
NIF3L1-209ENST00000454952 MAS1P04201 325 aa6.19□□□□□ -1.42
NIF3L1-209ENST00000454952 IFNA6P05013 189 aa6.19□□□□□ -1.42
NIF3L1-209ENST00000454952 UBBP0CG47 229 aa6.19□□□□□ -1.42
NIF3L1-209ENST00000454952 MGMTP16455 207 aa6.19□□□□□ -1.42
NIF3L1-209ENST00000454952 PPP1CCP36873 323 aaKnown RBP6.19□□□□□ -1.42
NIF3L1-209ENST00000454952 VEGFCP49767 419 aa6.19□□□□□ -1.42
NIF3L1-209ENST00000454952 SLURP1P55000 103 aa6.19□□□□□ -1.42
NIF3L1-209ENST00000454952 TAS2R43P59537 309 aa6.19□□□□□ -1.42
NIF3L1-209ENST00000454952 AKIRIN2Q53H80 203 aa6.19□□□□□ -1.42
NIF3L1-209ENST00000454952 ACTBL2Q562R1 376 aa6.19□□□□□ -1.42
NIF3L1-209ENST00000454952 C19orf54Q5BKX5 351 aa6.19□□□□□ -1.42
NIF3L1-209ENST00000454952 FAM53AQ6NSI3 398 aaPredicted RBP6.19□□□□□ -1.42
NIF3L1-209ENST00000454952 ZNF555Q8NEP9 628 aa6.19□□□□□ -1.42
NIF3L1-209ENST00000454952 GHSRQ92847 366 aa6.19□□□□□ -1.42
NIF3L1-209ENST00000454952 RDH12Q96NR8 316 aa6.19□□□□□ -1.42
NIF3L1-209ENST00000454952 NEDD4LQ96PU5 975 aa6.19□□□□□ -1.42
NIF3L1-209ENST00000454952 SPATA25Q9BR10 227 aa6.19□□□□□ -1.42
NIF3L1-209ENST00000454952 UQCC2Q9BRT2 126 aa6.19□□□□□ -1.42
NIF3L1-209ENST00000454952 NKX1-2Q9UD57 310 aaPredicted RBP6.19□□□□□ -1.42
NIF3L1-209ENST00000454952 TENM2Q9NT68 2774 aa6.19□□□□□ -1.42
NIF3L1-209ENST00000454952 TNCP24821 2201 aa6.19□□□□□ -1.42
NIF3L1-209ENST00000454952 IGHV4OR15-8A0A075B7B6 117 aa6.18□□□□□ -1.42
NIF3L1-209ENST00000454952 A0A087WW49 117 aa6.18□□□□□ -1.42
NIF3L1-209ENST00000454952 SAA2-SAA4A0A096LPE2 208 aa6.18□□□□□ -1.42
NIF3L1-209ENST00000454952 A0A0G2JLM5 398 aa6.18□□□□□ -1.42
NIF3L1-209ENST00000454952 UBE2QL1A1L167 161 aa6.18□□□□□ -1.42
NIF3L1-209ENST00000454952 MAGEA13PA6NCF6 341 aa6.18□□□□□ -1.42
NIF3L1-209ENST00000454952 TRIM64CA6NLI5 447 aa6.18□□□□□ -1.42
NIF3L1-209ENST00000454952 H3BUA1 57 aa6.18□□□□□ -1.42
NIF3L1-209ENST00000454952 SLC22A1O15245 554 aa6.18□□□□□ -1.42
NIF3L1-209ENST00000454952 JTBO76095 146 aa6.18□□□□□ -1.42
NIF3L1-209ENST00000454952 SPDEFO95238 335 aa6.18□□□□□ -1.42
NIF3L1-209ENST00000454952 TFAP2AP05549 437 aa6.18□□□□□ -1.42
NIF3L1-209ENST00000454952 SAA2P0DJI9 122 aaPredicted RBP6.18□□□□□ -1.42
NIF3L1-209ENST00000454952 IGHV4-30-4P0DP06 118 aa6.18□□□□□ -1.42
NIF3L1-209ENST00000454952 RAB6AP20340 208 aa6.18□□□□□ -1.42
NIF3L1-209ENST00000454952 MAPK3P27361 379 aaPredicted RBP6.18□□□□□ -1.42
NIF3L1-209ENST00000454952 CAPGP40121 348 aa6.18□□□□□ -1.42
NIF3L1-209ENST00000454952 ETV1P50549 477 aa6.18□□□□□ -1.42
NIF3L1-209ENST00000454952 TPPP2P59282 170 aa6.18□□□□□ -1.42
NIF3L1-209ENST00000454952 CX3CL1P78423 397 aa6.18□□□□□ -1.42
NIF3L1-209ENST00000454952 ADARB1P78563 741 aaKnown RBP6.18□□□□□ -1.42
NIF3L1-209ENST00000454952 GNMTQ14749 295 aa6.18□□□□□ -1.42
NIF3L1-209ENST00000454952 SRSF7Q16629 238 aaKnown RBP eCLIP6.18□□□□□ -1.42
NIF3L1-209ENST00000454952 C6orf141Q5SZD1 244 aa6.18□□□□□ -1.42
NIF3L1-209ENST00000454952 DMKNQ6E0U4 476 aaPredicted RBP6.18□□□□□ -1.42
NIF3L1-209ENST00000454952 UNQ5815/PRO19632Q6UWF5 114 aa6.18□□□□□ -1.42
NIF3L1-209ENST00000454952 FAM131AQ6UXB0 335 aa6.18□□□□□ -1.42
NIF3L1-209ENST00000454952 ZNF562Q6V9R5 426 aa6.18□□□□□ -1.42
NIF3L1-209ENST00000454952 MOB1BQ7L9L4 216 aa6.18□□□□□ -1.42
NIF3L1-209ENST00000454952 GTSCR1Q86UQ5 136 aa6.18□□□□□ -1.42
NIF3L1-209ENST00000454952 PPP1R27Q86WC6 154 aa6.18□□□□□ -1.42
NIF3L1-209ENST00000454952 ODF3L1Q8IXM7 274 aa6.18□□□□□ -1.42
NIF3L1-209ENST00000454952 OR52L2PQ8NGH6 319 aa6.18□□□□□ -1.42
NIF3L1-209ENST00000454952 Q96M66 194 aa6.18□□□□□ -1.42
NIF3L1-209ENST00000454952 TSNAXQ99598 290 aaKnown RBP6.18□□□□□ -1.42
NIF3L1-209ENST00000454952 SLC29A1Q99808 456 aa6.18□□□□□ -1.42
NIF3L1-209ENST00000454952 ALX4Q9H161 411 aaPredicted RBP6.18□□□□□ -1.42
NIF3L1-209ENST00000454952 BANF2Q9H503 90 aa6.18□□□□□ -1.42
NIF3L1-209ENST00000454952 RANGRFQ9HD47 186 aaPredicted RBP6.18□□□□□ -1.42
NIF3L1-209ENST00000454952 TPSG1Q9NRR2 321 aa6.18□□□□□ -1.42
NIF3L1-209ENST00000454952 AASSQ9UDR5 926 aa6.18□□□□□ -1.42
NIF3L1-209ENST00000454952 SLC23A1Q9UHI7 598 aa6.18□□□□□ -1.42
NIF3L1-209ENST00000454952 DIMT1Q9UNQ2 313 aaKnown RBP6.18□□□□□ -1.42
NIF3L1-209ENST00000454952 TMA7Q9Y2S6 64 aaKnown RBP6.18□□□□□ -1.42
NIF3L1-209ENST00000454952 WASHC3Q9Y3C0 194 aa6.18□□□□□ -1.42
NIF3L1-209ENST00000454952 NUBP2Q9Y5Y2 271 aa6.18□□□□□ -1.42
NIF3L1-209ENST00000454952 TRAV8-7A0A075B6U6 113 aa6.17□□□□□ -1.42
NIF3L1-209ENST00000454952 TRBV5-7A0A0A0MS05 114 aa6.17□□□□□ -1.42
NIF3L1-209ENST00000454952 C13orf42A0A1B0GVH6 325 aa6.17□□□□□ -1.42
NIF3L1-209ENST00000454952 H7C2Y5 167 aa6.17□□□□□ -1.42
NIF3L1-209ENST00000454952 ITGB1BP1O14713 200 aa6.17□□□□□ -1.42
NIF3L1-209ENST00000454952 IGLV1-51P01701 117 aa6.17□□□□□ -1.42
NIF3L1-209ENST00000454952 TRGV3P03979 118 aa6.17□□□□□ -1.42
NIF3L1-209ENST00000454952 CNTFRP26992 372 aa6.17□□□□□ -1.42
NIF3L1-209ENST00000454952 OR3A3P47888 321 aa6.17□□□□□ -1.42
NIF3L1-209ENST00000454952 HMGN3Q15651 99 aa6.17□□□□□ -1.42
NIF3L1-209ENST00000454952 TATDN3Q17R31 274 aa6.17□□□□□ -1.42
NIF3L1-209ENST00000454952 LRRC36Q1X8D7 754 aa6.17□□□□□ -1.42
NIF3L1-209ENST00000454952 OR2G6Q5TZ20 316 aa6.17□□□□□ -1.42
NIF3L1-209ENST00000454952 ZFAND6Q6FIF0 208 aa6.17□□□□□ -1.42
NIF3L1-209ENST00000454952 XAF1Q6GPH4 301 aa6.17□□□□□ -1.42
NIF3L1-209ENST00000454952 LILRB2Q8N423 598 aa6.17□□□□□ -1.42
NIF3L1-209ENST00000454952 MRPL30Q8TCC3 161 aaKnown RBP6.17□□□□□ -1.42
NIF3L1-209ENST00000454952 APH1BQ8WW43 257 aa6.17□□□□□ -1.42
NIF3L1-209ENST00000454952 IL1F10Q8WWZ1 152 aa6.17□□□□□ -1.42
NIF3L1-209ENST00000454952 RITA1Q96K30 269 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms