RNA–Protein interactions for RNA: ENST00000450867.1

COL3A1-203, Transcript of collagen type III alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL3A1, Length 268 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-203ENST00000450867 ZNF702PQ9H963 129 aa11.48□□□□□ -0.57
COL3A1-203ENST00000450867 PIPOXQ9P0Z9 390 aa11.48□□□□□ -0.57
COL3A1-203ENST00000450867 PKD1L1Q8TDX9 2849 aa11.47□□□□□ -0.57
COL3A1-203ENST00000450867 SAA2-SAA4A0A096LPE2 208 aa11.47□□□□□ -0.57
COL3A1-203ENST00000450867 M0QZK8 103 aa11.47□□□□□ -0.57
COL3A1-203ENST00000450867 HSPA12AO43301 675 aa11.47□□□□□ -0.57
COL3A1-203ENST00000450867 SAA2P0DJI9 122 aaPredicted RBP11.47□□□□□ -0.57
COL3A1-203ENST00000450867 CD24P25063 80 aa11.47□□□□□ -0.57
COL3A1-203ENST00000450867 CEACAM6P40199 344 aa11.47□□□□□ -0.57
COL3A1-203ENST00000450867 REG1BP48304 166 aa11.47□□□□□ -0.57
COL3A1-203ENST00000450867 SPCS2Q15005 226 aa11.47□□□□□ -0.57
COL3A1-203ENST00000450867 C11orf88Q6PI97 169 aa11.47□□□□□ -0.57
COL3A1-203ENST00000450867 WFDC12Q8WWY7 111 aa11.47□□□□□ -0.57
COL3A1-203ENST00000450867 MAFIPQ8WZ33 124 aa11.47□□□□□ -0.57
COL3A1-203ENST00000450867 SLC25A33Q9BSK2 321 aa11.47□□□□□ -0.57
COL3A1-203ENST00000450867 RDH8Q9NYR8 311 aa11.47□□□□□ -0.57
COL3A1-203ENST00000450867 RAB29O14966 203 aa11.46□□□□□ -0.57
COL3A1-203ENST00000450867 ST8SIA5O15466 376 aa11.46□□□□□ -0.57
COL3A1-203ENST00000450867 FGF16O43320 207 aa11.46□□□□□ -0.57
COL3A1-203ENST00000450867 AMY1AP04745 511 aa11.46□□□□□ -0.57
COL3A1-203ENST00000450867 AMY2AP04746 511 aa11.46□□□□□ -0.57
COL3A1-203ENST00000450867 EIF4EP06730 217 aaKnown RBP11.46□□□□□ -0.57
COL3A1-203ENST00000450867 CTXN2P0C2S0 81 aa11.46□□□□□ -0.57
COL3A1-203ENST00000450867 CBX5P45973 191 aa11.46□□□□□ -0.57
COL3A1-203ENST00000450867 LSAMPQ13449 338 aa11.46□□□□□ -0.57
COL3A1-203ENST00000450867 MZT2AQ6P582 158 aa11.46□□□□□ -0.57
COL3A1-203ENST00000450867 CNIH2Q6PI25 160 aa11.46□□□□□ -0.57
COL3A1-203ENST00000450867 H1FOOQ8IZA3 346 aaPredicted RBP11.46□□□□□ -0.57
COL3A1-203ENST00000450867 C3orf56Q8N813 242 aa11.46□□□□□ -0.57
COL3A1-203ENST00000450867 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.46□□□□□ -0.57
COL3A1-203ENST00000450867 OR10J5Q8NHC4 309 aa11.46□□□□□ -0.57
COL3A1-203ENST00000450867 DYNC2LI1Q8TCX1 351 aa11.46□□□□□ -0.57
COL3A1-203ENST00000450867 CAPSLQ8WWF8 208 aa11.46□□□□□ -0.57
COL3A1-203ENST00000450867 NABP2Q9BQ15 211 aa11.46□□□□□ -0.57
COL3A1-203ENST00000450867 COMMD3Q9UBI1 195 aa11.46□□□□□ -0.57
COL3A1-203ENST00000450867 ANAPC10Q9UM13 185 aa11.46□□□□□ -0.57
COL3A1-203ENST00000450867 RNF114Q9Y508 228 aa11.46□□□□□ -0.57
COL3A1-203ENST00000450867 TRRAPQ9Y4A5 3859 aa11.45□□□□□ -0.58
COL3A1-203ENST00000450867 VWFP04275 2813 aa11.45□□□□□ -0.58
COL3A1-203ENST00000450867 H3BMQ9 156 aa11.45□□□□□ -0.58
COL3A1-203ENST00000450867 PROP1O75360 226 aa11.45□□□□□ -0.58
COL3A1-203ENST00000450867 TPPPO94811 219 aa11.45□□□□□ -0.58
COL3A1-203ENST00000450867 IGKV1D-33P01593 117 aa11.45□□□□□ -0.58
COL3A1-203ENST00000450867 IGKV1-33P01594 117 aa11.45□□□□□ -0.58
COL3A1-203ENST00000450867 OR3A3P47888 321 aa11.45□□□□□ -0.58
COL3A1-203ENST00000450867 TAS2R20P59543 309 aa11.45□□□□□ -0.58
COL3A1-203ENST00000450867 TMEM69Q5SWH9 247 aa11.45□□□□□ -0.58
COL3A1-203ENST00000450867 MOB3BQ86TA1 216 aa11.45□□□□□ -0.58
COL3A1-203ENST00000450867 HOGA1Q86XE5 327 aa11.45□□□□□ -0.58
COL3A1-203ENST00000450867 OR2T10Q8NGZ9 312 aa11.45□□□□□ -0.58
COL3A1-203ENST00000450867 ISOC1Q96CN7 298 aa11.45□□□□□ -0.58
COL3A1-203ENST00000450867 EAF1Q96JC9 268 aaPredicted RBP11.45□□□□□ -0.58
COL3A1-203ENST00000450867 S1PR3Q99500 378 aa11.45□□□□□ -0.58
COL3A1-203ENST00000450867 PRSS22Q9GZN4 317 aa11.45□□□□□ -0.58
COL3A1-203ENST00000450867 RBM38Q9H0Z9 239 aaKnown RBP11.45□□□□□ -0.58
COL3A1-203ENST00000450867 CCDC59Q9P031 241 aaKnown RBP11.45□□□□□ -0.58
COL3A1-203ENST00000450867 ANXA10Q9UJ72 324 aa11.45□□□□□ -0.58
COL3A1-203ENST00000450867 GAB2Q9UQC2 676 aa11.45□□□□□ -0.58
COL3A1-203ENST00000450867 MOB4Q9Y3A3 225 aa11.45□□□□□ -0.58
COL3A1-203ENST00000450867 CEPT1Q9Y6K0 416 aa11.45□□□□□ -0.58
COL3A1-203ENST00000450867 BET1O15155 118 aa11.44□□□□□ -0.58
COL3A1-203ENST00000450867 MOSP00540 346 aa11.44□□□□□ -0.58
COL3A1-203ENST00000450867 HLA-DQB1P01920 261 aa11.44□□□□□ -0.58
COL3A1-203ENST00000450867 TMEM11P17152 192 aa11.44□□□□□ -0.58
COL3A1-203ENST00000450867 ELK1P19419 428 aa11.44□□□□□ -0.58
COL3A1-203ENST00000450867 SOX6P35712 828 aa11.44□□□□□ -0.58
COL3A1-203ENST00000450867 SHISA2Q6UWI4 295 aa11.44□□□□□ -0.58
COL3A1-203ENST00000450867 BEST4Q8NFU0 473 aa11.44□□□□□ -0.58
COL3A1-203ENST00000450867 OR8H1Q8NGG4 311 aa11.44□□□□□ -0.58
COL3A1-203ENST00000450867 OR2T6Q8NHC8 308 aa11.44□□□□□ -0.58
COL3A1-203ENST00000450867 ABHD14BQ96IU4 210 aa11.44□□□□□ -0.58
COL3A1-203ENST00000450867 ST6GALNAC5Q9BVH7 336 aa11.44□□□□□ -0.58
COL3A1-203ENST00000450867 MRPL20Q9BYC9 149 aaKnown RBP11.44□□□□□ -0.58
COL3A1-203ENST00000450867 SERTAD4Q9NUC0 356 aa11.44□□□□□ -0.58
COL3A1-203ENST00000450867 ADAM30Q9UKF2 790 aa11.44□□□□□ -0.58
COL3A1-203ENST00000450867 IGHV3-72A0A0B4J1Y9 119 aa11.43□□□□□ -0.58
COL3A1-203ENST00000450867 ZNF736B4DX44 427 aaPredicted RBP11.43□□□□□ -0.58
COL3A1-203ENST00000450867 HPGDSO60760 199 aa11.43□□□□□ -0.58
COL3A1-203ENST00000450867 TUSC2O75896 110 aa11.43□□□□□ -0.58
COL3A1-203ENST00000450867 PTHLHP12272 177 aa11.43□□□□□ -0.58
COL3A1-203ENST00000450867 NAT1P18440 290 aa11.43□□□□□ -0.58
COL3A1-203ENST00000450867 BLCAPP62952 87 aa11.43□□□□□ -0.58
COL3A1-203ENST00000450867 HES1Q14469 280 aa11.43□□□□□ -0.58
COL3A1-203ENST00000450867 RPL39P5Q59GN2 51 aa11.43□□□□□ -0.58
COL3A1-203ENST00000450867 C5orf56Q8N8D9 126 aa11.43□□□□□ -0.58
COL3A1-203ENST00000450867 WIPF2Q8TF74 440 aaPredicted RBP11.43□□□□□ -0.58
COL3A1-203ENST00000450867 SNAPC3Q92966 411 aa11.43□□□□□ -0.58
COL3A1-203ENST00000450867 CITED1Q99966 193 aa11.43□□□□□ -0.58
COL3A1-203ENST00000450867 WNT10AQ9GZT5 417 aa11.43□□□□□ -0.58
COL3A1-203ENST00000450867 PLSCR3Q9NRY6 295 aa11.43□□□□□ -0.58
COL3A1-203ENST00000450867 WNK1Q9H4A3 2382 aa11.42□□□□□ -0.58
COL3A1-203ENST00000450867 OR5H14A6NHG9 310 aa11.42□□□□□ -0.58
COL3A1-203ENST00000450867 ZNF701M0R085 212 aaPredicted RBP11.42□□□□□ -0.58
COL3A1-203ENST00000450867 NOL3O60936 208 aaKnown RBP11.42□□□□□ -0.58
COL3A1-203ENST00000450867 CT45A6P0DMU7 189 aa11.42□□□□□ -0.58
COL3A1-203ENST00000450867 CT45A5P0DMU8 189 aa11.42□□□□□ -0.58
COL3A1-203ENST00000450867 CT45A7P0DMV0 189 aa11.42□□□□□ -0.58
COL3A1-203ENST00000450867 KRTAP10-3P60369 221 aa11.42□□□□□ -0.58
COL3A1-203ENST00000450867 Q6ZS46 218 aa11.42□□□□□ -0.58
COL3A1-203ENST00000450867 GVQW1Q8N7I0 195 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms