RNA–Protein interactions for RNA: ENST00000438395.5

VPS50-204, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 3

Gene VPS50, Length 538 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-204ENST00000438395 MORN2Q502X0 79 aa6.05□□□□□ -1.44
VPS50-204ENST00000438395 LIN54Q6MZP7 749 aa6.05□□□□□ -1.44
VPS50-204ENST00000438395 FAM53AQ6NSI3 398 aaPredicted RBP6.05□□□□□ -1.44
VPS50-204ENST00000438395 MOB1BQ7L9L4 216 aa6.05□□□□□ -1.44
VPS50-204ENST00000438395 OR52L2PQ8NGH6 319 aa6.05□□□□□ -1.44
VPS50-204ENST00000438395 SETD6Q8TBK2 473 aa6.05□□□□□ -1.44
VPS50-204ENST00000438395 DERL3Q96Q80 235 aa6.05□□□□□ -1.44
VPS50-204ENST00000438395 UQCC2Q9BRT2 126 aa6.05□□□□□ -1.44
VPS50-204ENST00000438395 TMEM59Q9BXS4 323 aa6.05□□□□□ -1.44
VPS50-204ENST00000438395 PALMDQ9NP74 551 aa6.05□□□□□ -1.44
VPS50-204ENST00000438395 C8orf4Q9NR00 106 aa6.05□□□□□ -1.44
VPS50-204ENST00000438395 GHRLQ9UBU3 117 aa6.05□□□□□ -1.44
VPS50-204ENST00000438395 CLEC2DQ9UHP7 191 aa6.05□□□□□ -1.44
VPS50-204ENST00000438395 FOXA2Q9Y261 457 aaPredicted RBP6.05□□□□□ -1.44
VPS50-204ENST00000438395 A3GALT2U3KPV4 340 aa6.05□□□□□ -1.44
VPS50-204ENST00000438395 TRBV5-7A0A0A0MS05 114 aa6.04□□□□□ -1.44
VPS50-204ENST00000438395 A0A1W2PN81 502 aa6.04□□□□□ -1.44
VPS50-204ENST00000438395 G3V318 75 aa6.04□□□□□ -1.44
VPS50-204ENST00000438395 HSPA12AO43301 675 aa6.04□□□□□ -1.44
VPS50-204ENST00000438395 YPEL1O60688 119 aa6.04□□□□□ -1.44
VPS50-204ENST00000438395 SC5DO75845 299 aa6.04□□□□□ -1.44
VPS50-204ENST00000438395 LALBAP00709 142 aa6.04□□□□□ -1.44
VPS50-204ENST00000438395 CELP19835 753 aa6.04□□□□□ -1.44
VPS50-204ENST00000438395 CHATP28329 748 aa6.04□□□□□ -1.44
VPS50-204ENST00000438395 CHRNA7P36544 502 aa6.04□□□□□ -1.44
VPS50-204ENST00000438395 ZNF134P52741 427 aa6.04□□□□□ -1.44
VPS50-204ENST00000438395 ADARB1P78563 741 aaKnown RBP6.04□□□□□ -1.44
VPS50-204ENST00000438395 HTD2P86397 168 aa6.04□□□□□ -1.44
VPS50-204ENST00000438395 PITPNAQ00169 270 aa6.04□□□□□ -1.44
VPS50-204ENST00000438395 RUNX1Q01196 453 aa6.04□□□□□ -1.44
VPS50-204ENST00000438395 LRRC36Q1X8D7 754 aa6.04□□□□□ -1.44
VPS50-204ENST00000438395 RBM48Q5RL73 367 aaKnown RBP6.04□□□□□ -1.44
VPS50-204ENST00000438395 C6orf141Q5SZD1 244 aa6.04□□□□□ -1.44
VPS50-204ENST00000438395 PYHIN1Q6K0P9 492 aa6.04□□□□□ -1.44
VPS50-204ENST00000438395 FAM131AQ6UXB0 335 aa6.04□□□□□ -1.44
VPS50-204ENST00000438395 C8orf59Q8N0T1 100 aaPredicted RBP6.04□□□□□ -1.44
VPS50-204ENST00000438395 DHRSXQ8N5I4 330 aa6.04□□□□□ -1.44
VPS50-204ENST00000438395 TCTEX1D1Q8N7M0 179 aa6.04□□□□□ -1.44
VPS50-204ENST00000438395 ZNF491Q8N8L2 437 aa6.04□□□□□ -1.44
VPS50-204ENST00000438395 OR6Q1Q8NGQ2 317 aa6.04□□□□□ -1.44
VPS50-204ENST00000438395 PGLYRP3Q96LB9 341 aa6.04□□□□□ -1.44
VPS50-204ENST00000438395 YPEL2Q96QA6 119 aa6.04□□□□□ -1.44
VPS50-204ENST00000438395 NABP2Q9BQ15 211 aa6.04□□□□□ -1.44
VPS50-204ENST00000438395 ANKRD60Q9BZ19 345 aa6.04□□□□□ -1.44
VPS50-204ENST00000438395 KLK15Q9H2R5 256 aa6.04□□□□□ -1.44
VPS50-204ENST00000438395 VCXQ9H320 206 aa6.04□□□□□ -1.44
VPS50-204ENST00000438395 GNB4Q9HAV0 340 aa6.04□□□□□ -1.44
VPS50-204ENST00000438395 PIPOXQ9P0Z9 390 aa6.04□□□□□ -1.44
VPS50-204ENST00000438395 LSM4Q9Y4Z0 139 aaKnown RBP6.04□□□□□ -1.44
VPS50-204ENST00000438395 SAA2-SAA4A0A096LPE2 208 aa6.03□□□□□ -1.44
VPS50-204ENST00000438395 IGHV7-81A0A0B4J1V7 117 aa6.03□□□□□ -1.44
VPS50-204ENST00000438395 OR5H14A6NHG9 310 aa6.03□□□□□ -1.44
VPS50-204ENST00000438395 NOTOA8MTQ0 251 aa6.03□□□□□ -1.44
VPS50-204ENST00000438395 LINC01619G3V211 115 aa6.03□□□□□ -1.44
VPS50-204ENST00000438395 I3L521 148 aa6.03□□□□□ -1.44
VPS50-204ENST00000438395 EBAG9O00559 213 aa6.03□□□□□ -1.44
VPS50-204ENST00000438395 RRHO14718 337 aa6.03□□□□□ -1.44
VPS50-204ENST00000438395 RAB29O14966 203 aa6.03□□□□□ -1.44
VPS50-204ENST00000438395 RBBP9O75884 186 aa6.03□□□□□ -1.44
VPS50-204ENST00000438395 LGALS1P09382 135 aaKnown RBP6.03□□□□□ -1.44
VPS50-204ENST00000438395 OR8U9P0C7N5 309 aa6.03□□□□□ -1.44
VPS50-204ENST00000438395 SAA2P0DJI9 122 aaPredicted RBP6.03□□□□□ -1.44
VPS50-204ENST00000438395 MC5RP33032 325 aa6.03□□□□□ -1.44
VPS50-204ENST00000438395 VHLP40337 213 aa6.03□□□□□ -1.44
VPS50-204ENST00000438395 OR3A3P47888 321 aa6.03□□□□□ -1.44
VPS50-204ENST00000438395 RAB9AP51151 201 aa6.03□□□□□ -1.44
VPS50-204ENST00000438395 WNT4P56705 351 aa6.03□□□□□ -1.44
VPS50-204ENST00000438395 RPS11P62280 158 aaKnown RBP eCLIP6.03□□□□□ -1.44
VPS50-204ENST00000438395 GNB1P62873 340 aa6.03□□□□□ -1.44
VPS50-204ENST00000438395 GLT8D1Q68CQ7 371 aa6.03□□□□□ -1.44
VPS50-204ENST00000438395 ZNF660Q6AZW8 331 aaPredicted RBP6.03□□□□□ -1.44
VPS50-204ENST00000438395 FAM71F2Q6NXP2 309 aa6.03□□□□□ -1.44
VPS50-204ENST00000438395 ZNF833PQ6ZTB9 187 aa6.03□□□□□ -1.44
VPS50-204ENST00000438395 AHSA2Q719I0 299 aa6.03□□□□□ -1.44
VPS50-204ENST00000438395 GAPTQ8N292 157 aa6.03□□□□□ -1.44
VPS50-204ENST00000438395 PACRGLQ8N7B6 248 aa6.03□□□□□ -1.44
VPS50-204ENST00000438395 KCNG3Q8TAE7 436 aa6.03□□□□□ -1.44
VPS50-204ENST00000438395 MRPL30Q8TCC3 161 aaKnown RBP6.03□□□□□ -1.44
VPS50-204ENST00000438395 MYOZ3Q8TDC0 251 aa6.03□□□□□ -1.44
VPS50-204ENST00000438395 DCUN1D4Q92564 292 aa6.03□□□□□ -1.44
VPS50-204ENST00000438395 ARPC1AQ92747 370 aa6.03□□□□□ -1.44
VPS50-204ENST00000438395 FLYWCH2Q96CP2 140 aaKnown RBP6.03□□□□□ -1.44
VPS50-204ENST00000438395 RCHY1Q96PM5 261 aa6.03□□□□□ -1.44
VPS50-204ENST00000438395 OR4C12Q96R67 309 aa6.03□□□□□ -1.44
VPS50-204ENST00000438395 ELOVL1Q9BW60 279 aa6.03□□□□□ -1.44
VPS50-204ENST00000438395 ZMAT4Q9H898 229 aa6.03□□□□□ -1.44
VPS50-204ENST00000438395 CNOT2Q9NZN8 540 aaKnown RBP6.03□□□□□ -1.44
VPS50-204ENST00000438395 SLC23A1Q9UHI7 598 aa6.03□□□□□ -1.44
VPS50-204ENST00000438395 SCOCQ9UIL1 159 aa6.03□□□□□ -1.44
VPS50-204ENST00000438395 WASHC3Q9Y3C0 194 aa6.03□□□□□ -1.44
VPS50-204ENST00000438395 RYR3Q15413 4870 aa6.03□□□□□ -1.44
VPS50-204ENST00000438395 KRTAP9-7A8MTY7 169 aa6.02□□□□□ -1.45
VPS50-204ENST00000438395 ARPC1BO15143 372 aaKnown RBP6.02□□□□□ -1.45
VPS50-204ENST00000438395 APOA2P02652 100 aa6.02□□□□□ -1.45
VPS50-204ENST00000438395 LYL1P12980 280 aa6.02□□□□□ -1.45
VPS50-204ENST00000438395 CPEP16870 476 aa6.02□□□□□ -1.45
VPS50-204ENST00000438395 CNTFRP26992 372 aa6.02□□□□□ -1.45
VPS50-204ENST00000438395 PPIFP30405 207 aaKnown RBP6.02□□□□□ -1.45
VPS50-204ENST00000438395 TPPP2P59282 170 aa6.02□□□□□ -1.45
VPS50-204ENST00000438395 RPS27AP62979 156 aaKnown RBP6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms