RNA–Protein interactions for RNA: ENST00000437600.8

CUX1-206, Transcript of cut like homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene CUX1, Length 3,031 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-206ENST00000437600 ATP6V0CP27449 155 aa7.99□□□□□ -1.13
CUX1-206ENST00000437600 F2RL1P55085 397 aa7.99□□□□□ -1.13
CUX1-206ENST00000437600 VAMP2P63027 116 aa7.99□□□□□ -1.13
CUX1-206ENST00000437600 SPINK9Q5DT21 86 aa7.99□□□□□ -1.13
CUX1-206ENST00000437600 EIF5AL1Q6IS14 154 aaKnown RBP7.99□□□□□ -1.13
CUX1-206ENST00000437600 BTNL3Q6UXE8 466 aa7.99□□□□□ -1.13
CUX1-206ENST00000437600 Q6ZR03 302 aa7.99□□□□□ -1.13
CUX1-206ENST00000437600 UBAC2Q8NBM4 344 aa7.99□□□□□ -1.13
CUX1-206ENST00000437600 NANOS1Q8WY41 292 aaKnown RBP7.99□□□□□ -1.13
CUX1-206ENST00000437600 GPR146Q96CH1 333 aa7.99□□□□□ -1.13
CUX1-206ENST00000437600 TCEAL7Q9BRU2 100 aa7.99□□□□□ -1.13
CUX1-206ENST00000437600 PLEKHA2Q9HB19 425 aa7.99□□□□□ -1.13
CUX1-206ENST00000437600 SEBOXQ9HB31 216 aaPredicted RBP7.99□□□□□ -1.13
CUX1-206ENST00000437600 GP6Q9HCN6 339 aa7.99□□□□□ -1.13
CUX1-206ENST00000437600 RPS10P5Q9NQ39 176 aa7.99□□□□□ -1.13
CUX1-206ENST00000437600 F2RP25116 425 aa7.98□□□□□ -1.13
CUX1-206ENST00000437600 UCP3P55916 312 aa7.98□□□□□ -1.13
CUX1-206ENST00000437600 HAGHQ16775 308 aa7.98□□□□□ -1.13
CUX1-206ENST00000437600 ZNF324BQ6AW86 544 aaPredicted RBP7.98□□□□□ -1.13
CUX1-206ENST00000437600 Q6P435 159 aa7.98□□□□□ -1.13
CUX1-206ENST00000437600 Q8NFD4 153 aa7.98□□□□□ -1.13
CUX1-206ENST00000437600 OR1L1Q8NH94 360 aa7.98□□□□□ -1.13
CUX1-206ENST00000437600 LURAP1Q96LR2 239 aa7.98□□□□□ -1.13
CUX1-206ENST00000437600 SPACA1Q9HBV2 294 aa7.98□□□□□ -1.13
CUX1-206ENST00000437600 PLSCR2Q9NRY7 297 aa7.98□□□□□ -1.13
CUX1-206ENST00000437600 FAM212BQ9NTI7 297 aaPredicted RBP7.98□□□□□ -1.13
CUX1-206ENST00000437600 TAAR3PQ9P1P4 343 aa7.98□□□□□ -1.13
CUX1-206ENST00000437600 CACFD1Q9UGQ2 172 aa7.98□□□□□ -1.13
CUX1-206ENST00000437600 OR2W1Q9Y3N9 320 aa7.98□□□□□ -1.13
CUX1-206ENST00000437600 M0R036 132 aa7.98□□□□□ -1.13
CUX1-206ENST00000437600 SLC31A2O15432 143 aa7.98□□□□□ -1.13
CUX1-206ENST00000437600 KRASP01116 189 aa7.98□□□□□ -1.13
CUX1-206ENST00000437600 IGKV1-39P01597 117 aa7.98□□□□□ -1.13
CUX1-206ENST00000437600 IGLV2-14P01704 120 aa7.98□□□□□ -1.13
CUX1-206ENST00000437600 IGKV1D-39P04432 117 aa7.98□□□□□ -1.13
CUX1-206ENST00000437600 TAS2R60P59551 318 aa7.98□□□□□ -1.13
CUX1-206ENST00000437600 RNF212Q495C1 297 aa7.98□□□□□ -1.13
CUX1-206ENST00000437600 SPRNQ5BIV9 151 aa7.98□□□□□ -1.13
CUX1-206ENST00000437600 IGFL3Q6UXB1 125 aa7.98□□□□□ -1.13
CUX1-206ENST00000437600 LRTM2Q8N967 370 aa7.98□□□□□ -1.13
CUX1-206ENST00000437600 OR52L2PQ8NGH6 319 aa7.98□□□□□ -1.13
CUX1-206ENST00000437600 STARD4Q96DR4 205 aa7.98□□□□□ -1.13
CUX1-206ENST00000437600 TECTBQ96PL2 329 aa7.98□□□□□ -1.13
CUX1-206ENST00000437600 NEU1Q99519 415 aa7.98□□□□□ -1.13
CUX1-206ENST00000437600 GPR61Q9BZJ8 451 aa7.98□□□□□ -1.13
CUX1-206ENST00000437600 POMT1Q9Y6A1 747 aa7.98□□□□□ -1.13
CUX1-206ENST00000437600 BORCS7-ASMTA0A0B4J1R7 106 aa7.97□□□□□ -1.13
CUX1-206ENST00000437600 KIR2DS1A0A191URI9 304 aa7.97□□□□□ -1.13
CUX1-206ENST00000437600 ZNF729A6NN14 1252 aaPredicted RBP7.97□□□□□ -1.13
CUX1-206ENST00000437600 MLNRO43193 412 aa7.97□□□□□ -1.13
CUX1-206ENST00000437600 RAMP3O60896 148 aa7.97□□□□□ -1.13
CUX1-206ENST00000437600 MBP02144 154 aa7.97□□□□□ -1.13
CUX1-206ENST00000437600 METTL15P1P0C7V9 234 aa7.97□□□□□ -1.13
CUX1-206ENST00000437600 DANCRP0C864 163 aa7.97□□□□□ -1.13
CUX1-206ENST00000437600 BMP5P22003 454 aa7.97□□□□□ -1.13
CUX1-206ENST00000437600 KIR2DS4P43632 304 aa7.97□□□□□ -1.13
CUX1-206ENST00000437600 OR3A1P47881 315 aa7.97□□□□□ -1.13
CUX1-206ENST00000437600 P2RY1P47900 373 aa7.97□□□□□ -1.13
CUX1-206ENST00000437600 KIR2DS1Q14954 304 aa7.97□□□□□ -1.13
CUX1-206ENST00000437600 TESK1Q15569 626 aa7.97□□□□□ -1.13
CUX1-206ENST00000437600 GUK1Q16774 197 aa7.97□□□□□ -1.13
CUX1-206ENST00000437600 LRP11Q86VZ4 500 aa7.97□□□□□ -1.13
CUX1-206ENST00000437600 OR10V1Q8NGI7 309 aa7.97□□□□□ -1.13
CUX1-206ENST00000437600 MRGPRDQ8TDS7 321 aa7.97□□□□□ -1.13
CUX1-206ENST00000437600 HIST1H2BAQ96A08 127 aa7.97□□□□□ -1.13
CUX1-206ENST00000437600 SAT2Q96F10 170 aaPredicted RBP7.97□□□□□ -1.13
CUX1-206ENST00000437600 SMCO4Q9NRQ5 59 aa7.97□□□□□ -1.13
CUX1-206ENST00000437600 C19orf12Q9NSK7 152 aa7.97□□□□□ -1.13
CUX1-206ENST00000437600 CACNG5Q9UF02 275 aa7.97□□□□□ -1.13
CUX1-206ENST00000437600 FAM215AQ9Y5M1 114 aa7.97□□□□□ -1.13
CUX1-206ENST00000437600 MPC1Q9Y5U8 109 aa7.97□□□□□ -1.13
CUX1-206ENST00000437600 MED13LQ71F56 2210 aa7.97□□□□□ -1.13
CUX1-206ENST00000437600 CHD3Q12873 2000 aaKnown RBP7.97□□□□□ -1.13
CUX1-206ENST00000437600 ZNF462Q96JM2 2506 aa7.97□□□□□ -1.13
CUX1-206ENST00000437600 KIAA1324LA8MWY0 1029 aaPredicted RBP7.97□□□□□ -1.13
CUX1-206ENST00000437600 HMGB3O15347 200 aaKnown RBP7.97□□□□□ -1.13
CUX1-206ENST00000437600 CD5P06127 495 aa7.97□□□□□ -1.13
CUX1-206ENST00000437600 PMELP40967 661 aa7.97□□□□□ -1.13
CUX1-206ENST00000437600 PAX9P55771 341 aa7.97□□□□□ -1.13
CUX1-206ENST00000437600 EIF5AP63241 154 aaKnown RBP7.97□□□□□ -1.13
CUX1-206ENST00000437600 DEFA6Q01524 100 aa7.97□□□□□ -1.13
CUX1-206ENST00000437600 ZNF816Q0VGE8 651 aaPredicted RBP7.97□□□□□ -1.13
CUX1-206ENST00000437600 OR8G1Q15617 311 aa7.97□□□□□ -1.13
CUX1-206ENST00000437600 MPV17LQ2QL34 196 aa7.97□□□□□ -1.13
CUX1-206ENST00000437600 FAM201AQ5SY85 155 aa7.97□□□□□ -1.13
CUX1-206ENST00000437600 TMEM56Q96MV1 263 aa7.97□□□□□ -1.13
CUX1-206ENST00000437600 SSX3Q99909 188 aa7.97□□□□□ -1.13
CUX1-206ENST00000437600 RSG1Q9BU20 258 aa7.97□□□□□ -1.13
CUX1-206ENST00000437600 PUS1Q9Y606 427 aaKnown RBP eCLIP7.97□□□□□ -1.13
CUX1-206ENST00000437600 TMEM56-RWDD3S4R434 201 aa7.97□□□□□ -1.13
CUX1-206ENST00000437600 CECR9P0C854 216 aa7.97□□□□□ -1.13
CUX1-206ENST00000437600 FOLR2P14207 255 aa7.97□□□□□ -1.13
CUX1-206ENST00000437600 VDAC1P21796 283 aa7.97□□□□□ -1.13
CUX1-206ENST00000437600 SNCAP37840 140 aa7.97□□□□□ -1.13
CUX1-206ENST00000437600 GABRA2P47869 451 aa7.97□□□□□ -1.13
CUX1-206ENST00000437600 IL24Q13007 206 aa7.97□□□□□ -1.13
CUX1-206ENST00000437600 EDDM3AQ14507 147 aa7.97□□□□□ -1.13
CUX1-206ENST00000437600 NMSQ5H8A3 153 aa7.97□□□□□ -1.13
CUX1-206ENST00000437600 C22orf34Q6ZV56 151 aa7.97□□□□□ -1.13
CUX1-206ENST00000437600 THNSL2Q86YJ6 484 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms