RNA–Protein interactions for RNA: ENST00000435327.2

CCDC13-202, Transcript of coiled-coil domain containing 13, humanhuman

TSL 2

Gene CCDC13, Length 821 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC13-202ENST00000435327 IFI27L2Q9H2X8 130 aa13.53□□□□□ -0.24
CCDC13-202ENST00000435327 CCL28Q9NRJ3 127 aa13.53□□□□□ -0.24
CCDC13-202ENST00000435327 AMMECR1Q9Y4X0 333 aaPredicted RBP13.53□□□□□ -0.24
CCDC13-202ENST00000435327 MYO9AB2RTY4 2548 aa13.53□□□□□ -0.24
CCDC13-202ENST00000435327 ITPR3Q14573 2671 aa13.53□□□□□ -0.24
CCDC13-202ENST00000435327 ODF3BA8MYP8 253 aa13.52□□□□□ -0.25
CCDC13-202ENST00000435327 IGLV1-47P01700 117 aa13.52□□□□□ -0.25
CCDC13-202ENST00000435327 IL3RAP26951 378 aa13.52□□□□□ -0.25
CCDC13-202ENST00000435327 SLC6A1P30531 599 aa13.52□□□□□ -0.25
CCDC13-202ENST00000435327 UCP3P55916 312 aa13.52□□□□□ -0.25
CCDC13-202ENST00000435327 LGALS4P56470 323 aa13.52□□□□□ -0.25
CCDC13-202ENST00000435327 BAMBIQ13145 260 aa13.52□□□□□ -0.25
CCDC13-202ENST00000435327 LPCAT3Q6P1A2 487 aa13.52□□□□□ -0.25
CCDC13-202ENST00000435327 OR4P4Q8NGL7 312 aa13.52□□□□□ -0.25
CCDC13-202ENST00000435327 MRGPRFQ96AM1 343 aa13.52□□□□□ -0.25
CCDC13-202ENST00000435327 SCGB3A2Q96PL1 93 aa13.52□□□□□ -0.25
CCDC13-202ENST00000435327 PIPOXQ9P0Z9 390 aa13.52□□□□□ -0.25
CCDC13-202ENST00000435327 ABCA1O95477 2261 aa13.52□□□□□ -0.25
CCDC13-202ENST00000435327 IGHV1-69DA0A0B4J2H0 117 aa13.51□□□□□ -0.25
CCDC13-202ENST00000435327 RAB29O14966 203 aa13.51□□□□□ -0.25
CCDC13-202ENST00000435327 NDUFB6O95139 128 aa13.51□□□□□ -0.25
CCDC13-202ENST00000435327 IGHV1-69P01742 117 aa13.51□□□□□ -0.25
CCDC13-202ENST00000435327 IGHV4-38-2P0DP08 117 aa13.51□□□□□ -0.25
CCDC13-202ENST00000435327 PLA1AQ53H76 456 aa13.51□□□□□ -0.25
CCDC13-202ENST00000435327 RUSC1-AS1Q66K80 236 aa13.51□□□□□ -0.25
CCDC13-202ENST00000435327 C1orf229Q6ZS94 237 aaPredicted RBP13.51□□□□□ -0.25
CCDC13-202ENST00000435327 NRARPQ7Z6K4 114 aa13.51□□□□□ -0.25
CCDC13-202ENST00000435327 SLC38A6Q8IZM9 456 aa13.51□□□□□ -0.25
CCDC13-202ENST00000435327 ZNF645Q8N7E2 425 aa13.51□□□□□ -0.25
CCDC13-202ENST00000435327 ZFAND1Q8TCF1 268 aa13.51□□□□□ -0.25
CCDC13-202ENST00000435327 SMR3AQ99954 134 aa13.51□□□□□ -0.25
CCDC13-202ENST00000435327 SLC25A21Q9BQT8 299 aaPredicted RBP13.51□□□□□ -0.25
CCDC13-202ENST00000435327 AGMATQ9BSE5 352 aa13.51□□□□□ -0.25
CCDC13-202ENST00000435327 OCEL1Q9H607 264 aa13.51□□□□□ -0.25
CCDC13-202ENST00000435327 C14orf166Q9Y224 244 aaKnown RBP13.51□□□□□ -0.25
CCDC13-202ENST00000435327 VSIG4Q9Y279 399 aa13.51□□□□□ -0.25
CCDC13-202ENST00000435327 SAA2-SAA4A0A096LPE2 208 aa13.5□□□□□ -0.25
CCDC13-202ENST00000435327 BUB1B-PAK6H3BSN5 160 aa13.5□□□□□ -0.25
CCDC13-202ENST00000435327 GPR31O00270 319 aa13.5□□□□□ -0.25
CCDC13-202ENST00000435327 NPFFO15130 113 aa13.5□□□□□ -0.25
CCDC13-202ENST00000435327 SLC22A5O76082 557 aa13.5□□□□□ -0.25
CCDC13-202ENST00000435327 LY6G6DO95868 133 aa13.5□□□□□ -0.25
CCDC13-202ENST00000435327 PTTG1O95997 202 aa13.5□□□□□ -0.25
CCDC13-202ENST00000435327 TCRBP04435 133 aa13.5□□□□□ -0.25
CCDC13-202ENST00000435327 SAA2P0DJI9 122 aaPredicted RBP13.5□□□□□ -0.25
CCDC13-202ENST00000435327 FOSL1P15407 271 aa13.5□□□□□ -0.25
CCDC13-202ENST00000435327 HTR1DP28221 377 aa13.5□□□□□ -0.25
CCDC13-202ENST00000435327 SURF2Q15527 256 aaPredicted RBP13.5□□□□□ -0.25
CCDC13-202ENST00000435327 RGS21Q2M5E4 152 aa13.5□□□□□ -0.25
CCDC13-202ENST00000435327 ABCA11PQ4W5N1 156 aa13.5□□□□□ -0.25
CCDC13-202ENST00000435327 RPL39P5Q59GN2 51 aa13.5□□□□□ -0.25
CCDC13-202ENST00000435327 KLF17Q5JT82 389 aaPredicted RBP13.5□□□□□ -0.25
CCDC13-202ENST00000435327 ZNF818PQ6ZRF7 136 aa13.5□□□□□ -0.25
CCDC13-202ENST00000435327 ODF3L1Q8IXM7 274 aa13.5□□□□□ -0.25
CCDC13-202ENST00000435327 DRAM1Q8N682 238 aa13.5□□□□□ -0.25
CCDC13-202ENST00000435327 ZDHHC22Q8N966 263 aa13.5□□□□□ -0.25
CCDC13-202ENST00000435327 RSRP1Q9BUV0 290 aa13.5□□□□□ -0.25
CCDC13-202ENST00000435327 GHITMQ9H3K2 345 aa13.5□□□□□ -0.25
CCDC13-202ENST00000435327 COPZ2Q9P299 210 aa13.5□□□□□ -0.25
CCDC13-202ENST00000435327 GPR132Q9UNW8 380 aa13.5□□□□□ -0.25
CCDC13-202ENST00000435327 TBL2Q9Y4P3 447 aaKnown RBP13.5□□□□□ -0.25
CCDC13-202ENST00000435327 NOTCH2Q04721 2471 aa13.49□□□□□ -0.25
CCDC13-202ENST00000435327 A8MV72 311 aaPredicted RBP13.49□□□□□ -0.25
CCDC13-202ENST00000435327 ARPC1BO15143 372 aaKnown RBP13.49□□□□□ -0.25
CCDC13-202ENST00000435327 RLN1P04808 185 aa13.49□□□□□ -0.25
CCDC13-202ENST00000435327 CTSDP07339 412 aaPredicted RBP13.49□□□□□ -0.25
CCDC13-202ENST00000435327 PI3P19957 117 aa13.49□□□□□ -0.25
CCDC13-202ENST00000435327 GNRHRP30968 328 aa13.49□□□□□ -0.25
CCDC13-202ENST00000435327 SAA4P35542 130 aa13.49□□□□□ -0.25
CCDC13-202ENST00000435327 MIDNQ504T8 468 aa13.49□□□□□ -0.25
CCDC13-202ENST00000435327 PHLDA2Q53GA4 152 aa13.49□□□□□ -0.25
CCDC13-202ENST00000435327 MINOS1Q5TGZ0 78 aa13.49□□□□□ -0.25
CCDC13-202ENST00000435327 BRD3OSQ6XYD6 125 aa13.49□□□□□ -0.25
CCDC13-202ENST00000435327 LHFPL4Q7Z7J7 247 aa13.49□□□□□ -0.25
CCDC13-202ENST00000435327 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.49□□□□□ -0.25
CCDC13-202ENST00000435327 NANPQ8TBE9 248 aa13.49□□□□□ -0.25
CCDC13-202ENST00000435327 RPEQ96AT9 228 aa13.49□□□□□ -0.25
CCDC13-202ENST00000435327 C5orf30Q96GV9 206 aa13.49□□□□□ -0.25
CCDC13-202ENST00000435327 AKR1E2Q96JD6 320 aa13.49□□□□□ -0.25
CCDC13-202ENST00000435327 S1PR3Q99500 378 aa13.49□□□□□ -0.25
CCDC13-202ENST00000435327 C20orf85Q9H1P6 137 aa13.49□□□□□ -0.25
CCDC13-202ENST00000435327 SDHAF2Q9NX18 166 aa13.49□□□□□ -0.25
CCDC13-202ENST00000435327 DPM3Q9P2X0 92 aa13.49□□□□□ -0.25
CCDC13-202ENST00000435327 MINOS1-NBL1R4GNA1 71 aa13.49□□□□□ -0.25
CCDC13-202ENST00000435327 CREBBPQ92793 2442 aa13.49□□□□□ -0.25
CCDC13-202ENST00000435327 TRAV6A0A075B6T7 132 aa13.48□□□□□ -0.25
CCDC13-202ENST00000435327 LEUTXA8MZ59 168 aa13.48□□□□□ -0.25
CCDC13-202ENST00000435327 M0R1X1 148 aa13.48□□□□□ -0.25
CCDC13-202ENST00000435327 SPNP16150 400 aa13.48□□□□□ -0.25
CCDC13-202ENST00000435327 EPHA1P21709 976 aa13.48□□□□□ -0.25
CCDC13-202ENST00000435327 S100GP29377 79 aa13.48□□□□□ -0.25
CCDC13-202ENST00000435327 CEACAM3P40198 252 aa13.48□□□□□ -0.25
CCDC13-202ENST00000435327 REG1BP48304 166 aa13.48□□□□□ -0.25
CCDC13-202ENST00000435327 MSMO1Q15800 293 aa13.48□□□□□ -0.25
CCDC13-202ENST00000435327 TMED4Q7Z7H5 227 aa13.48□□□□□ -0.25
CCDC13-202ENST00000435327 CMTM1Q8IZ96 169 aa13.48□□□□□ -0.25
CCDC13-202ENST00000435327 TEX29Q8N6K0 151 aa13.48□□□□□ -0.25
CCDC13-202ENST00000435327 ZBTB34Q8NCN2 500 aa13.48□□□□□ -0.25
CCDC13-202ENST00000435327 DUSP18Q8NEJ0 188 aa13.48□□□□□ -0.25
CCDC13-202ENST00000435327 ZNF486Q96H40 463 aaPredicted RBP13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms